RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ZFP92A6NM28 416 aa10.85□□□□□ -0.67
SHMT2-203ENST00000449049 TGOLN2O43493 480 aa10.85□□□□□ -0.67
SHMT2-203ENST00000449049 IGKV1-17P01599 117 aa10.85□□□□□ -0.67
SHMT2-203ENST00000449049 CTSGP08311 255 aa10.85□□□□□ -0.67
SHMT2-203ENST00000449049 RUNX1Q01196 453 aa10.85□□□□□ -0.67
SHMT2-203ENST00000449049 C11orf44Q8N8P7 122 aa10.85□□□□□ -0.67
SHMT2-203ENST00000449049 STOML3Q8TAV4 291 aa10.85□□□□□ -0.67
SHMT2-203ENST00000449049 NPCDR1Q9BY65 106 aa10.85□□□□□ -0.67
SHMT2-203ENST00000449049 TSSC4Q9Y5U2 329 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-203ENST00000449049 AGPAT2O15120 278 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 NDUFS6O75380 124 aaKnown RBP10.84□□□□□ -0.67
SHMT2-203ENST00000449049 SCGB2A1O75556 95 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 TRBV12-3P01733 135 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 ADMP35318 185 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 TIGITQ495A1 244 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 KHDC1LQ5JSQ8 128 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 SPSB3Q6PJ21 355 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 TMEM158Q8WZ71 300 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 OR5B12Q96R08 314 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 GINS3Q9BRX5 216 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 CHRDL1Q9BU40 450 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 GGTLC1Q9BX51 225 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 PEF1Q9UBV8 284 aaKnown RBP10.84□□□□□ -0.67
SHMT2-203ENST00000449049 ARL3P36405 182 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 RAB31Q13636 194 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 HIST2H2BDQ6DRA6 164 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 UQCC3Q6UW78 93 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 CYP2G1PQ6ZSU1 146 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 C18orf65Q6ZTR6 163 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 ZNF414Q96IQ9 312 aa10.84□□□□□ -0.67
SHMT2-203ENST00000449049 PPP5D1E7EU14 171 aa10.83□□□□□ -0.68
SHMT2-203ENST00000449049 CAMLGP49069 296 aa10.83□□□□□ -0.68
SHMT2-203ENST00000449049 YPEL3P61236 119 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-203ENST00000449049 EIF5AP63241 154 aaKnown RBP10.83□□□□□ -0.68
SHMT2-203ENST00000449049 ZNF90Q03938 601 aa10.83□□□□□ -0.68
SHMT2-203ENST00000449049 HSD17B11Q8NBQ5 300 aa10.83□□□□□ -0.68
SHMT2-203ENST00000449049 MLXQ9UH92 298 aa10.83□□□□□ -0.68
SHMT2-203ENST00000449049 TIMM9Q9Y5J7 89 aa10.83□□□□□ -0.68
SHMT2-203ENST00000449049 NF1P21359 2839 aa10.83□□□□□ -0.68
SHMT2-203ENST00000449049 NIPBLQ6KC79 2804 aaeCLIP10.83□□□□□ -0.68
SHMT2-203ENST00000449049 ADARB2-AS1A8MUL3 147 aa10.82□□□□□ -0.68
SHMT2-203ENST00000449049 BMPR1BO00238 502 aa10.82□□□□□ -0.68
SHMT2-203ENST00000449049 FABP1P07148 127 aa10.82□□□□□ -0.68
SHMT2-203ENST00000449049 TPT1P13693 172 aaKnown RBP10.82□□□□□ -0.68
SHMT2-203ENST00000449049 ATP6V0CP27449 155 aa10.82□□□□□ -0.68
SHMT2-203ENST00000449049 BAP18Q8IXM2 172 aa10.82□□□□□ -0.68
SHMT2-203ENST00000449049 KLHL30-AS1Q8NEE0 82 aa10.82□□□□□ -0.68
SHMT2-203ENST00000449049 RSG1Q9BU20 258 aa10.82□□□□□ -0.68
SHMT2-203ENST00000449049 SLC45A2Q9UMX9 530 aa10.82□□□□□ -0.68
SHMT2-203ENST00000449049 C2CD3Q4AC94 2353 aa10.82□□□□□ -0.68
SHMT2-203ENST00000449049 C17orf112F2Z3M2 114 aa10.82□□□□□ -0.68
SHMT2-203ENST00000449049 TOMM40O96008 361 aa10.82□□□□□ -0.68
SHMT2-203ENST00000449049 RPL29P47914 159 aaKnown RBP10.82□□□□□ -0.68
SHMT2-203ENST00000449049 SELENOTP62341 195 aa10.82□□□□□ -0.68
SHMT2-203ENST00000449049 TMEM182Q6ZP80 229 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-203ENST00000449049 GNPNAT1Q96EK6 184 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-203ENST00000449049 CITED1Q99966 193 aa10.82□□□□□ -0.68
SHMT2-203ENST00000449049 PSMG3Q9BT73 122 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-203ENST00000449049 PPP1R14DQ9NXH3 145 aa10.82□□□□□ -0.68
SHMT2-203ENST00000449049 HSPB1P04792 205 aaKnown RBP10.81□□□□□ -0.68
SHMT2-203ENST00000449049 PRR20EP86478 221 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 PRR20CP86479 221 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 PRR20DP86480 221 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 PRR20BP86481 221 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 PRR20AP86496 221 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 NDUFA11Q86Y39 141 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 PHYHIPLQ96FC7 376 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 KCNIP2Q9NS61 270 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 IGHV4OR15-8A0A075B7B6 117 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 A0A087WW49 117 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 RAB19A4D1S5 217 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 NUDT19A8MXV4 375 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 GGCTO75223 188 aaKnown RBP10.81□□□□□ -0.68
SHMT2-203ENST00000449049 LINC00869P0C866 280 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 SPP1P10451 314 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 PSG1P11464 419 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 FAM74A1Q5RGS3 127 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 MIC13Q5XKP0 118 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 ZNF709Q8N972 641 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 SH3BGRL3Q9H299 93 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 BIN3Q9NQY0 253 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 RFNGQ9Y644 331 aa10.81□□□□□ -0.68
SHMT2-203ENST00000449049 TMEM218A2RU14 115 aa10.8□□□□□ -0.68
SHMT2-203ENST00000449049 RD3LP0DJH9 198 aa10.8□□□□□ -0.68
SHMT2-203ENST00000449049 GATA2P23769 480 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-203ENST00000449049 ZNF616Q08AN1 781 aa10.8□□□□□ -0.68
SHMT2-203ENST00000449049 C8orf86Q6ZUL3 223 aa10.8□□□□□ -0.68
SHMT2-203ENST00000449049 SVBPQ8N300 66 aa10.8□□□□□ -0.68
SHMT2-203ENST00000449049 STPG3Q8N7X2 389 aa10.8□□□□□ -0.68
SHMT2-203ENST00000449049 OR2G3Q8NGZ4 309 aa10.8□□□□□ -0.68
SHMT2-203ENST00000449049 PXMP4Q9Y6I8 212 aa10.8□□□□□ -0.68
SHMT2-203ENST00000449049 A0A1W2PRX2 142 aa10.79□□□□□ -0.68
SHMT2-203ENST00000449049 OR2C1O95371 312 aa10.79□□□□□ -0.68
SHMT2-203ENST00000449049 SEC11BP0C7V7 166 aa10.79□□□□□ -0.68
SHMT2-203ENST00000449049 DEFB136Q30KP8 78 aa10.79□□□□□ -0.68
SHMT2-203ENST00000449049 Q8WTZ3 238 aa10.79□□□□□ -0.68
SHMT2-203ENST00000449049 NARS2Q96I59 477 aaKnown RBP10.79□□□□□ -0.68
SHMT2-203ENST00000449049 C10orf91Q5T1B1 145 aa10.79□□□□□ -0.68
SHMT2-203ENST00000449049 OR11H1Q8NG94 326 aa10.79□□□□□ -0.68
SHMT2-203ENST00000449049 OR51G1Q8NGK1 321 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms