RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 DFFBO76075 338 aa13.15□□□□□ -0.3
LIME1-202ENST00000444951 IFNA5P01569 189 aa13.15□□□□□ -0.3
LIME1-202ENST00000444951 FABP1P07148 127 aa13.15□□□□□ -0.3
LIME1-202ENST00000444951 YPEL3P61236 119 aaPredicted RBP13.15□□□□□ -0.3
LIME1-202ENST00000444951 KLF5Q13887 457 aaPredicted RBP13.15□□□□□ -0.3
LIME1-202ENST00000444951 UNQ9165/PRO28630Q6UXU0 137 aa13.15□□□□□ -0.3
LIME1-202ENST00000444951 CYP2G1PQ6ZSU1 146 aa13.15□□□□□ -0.3
LIME1-202ENST00000444951 MRAPQ8TCY5 172 aa13.15□□□□□ -0.3
LIME1-202ENST00000444951 SCGB1C1Q8TD33 95 aa13.15□□□□□ -0.3
LIME1-202ENST00000444951 Q8WTZ3 238 aa13.15□□□□□ -0.3
LIME1-202ENST00000444951 MGST2Q99735 147 aa13.15□□□□□ -0.3
LIME1-202ENST00000444951 WDR83OSQ9Y284 106 aa13.15□□□□□ -0.3
LIME1-202ENST00000444951 NDUFA4O00483 81 aa13.14□□□□□ -0.31
LIME1-202ENST00000444951 AGPAT2O15120 278 aa13.14□□□□□ -0.31
LIME1-202ENST00000444951 TOMM40O96008 361 aa13.14□□□□□ -0.31
LIME1-202ENST00000444951 PSG1P11464 419 aa13.14□□□□□ -0.31
LIME1-202ENST00000444951 CAMLGP49069 296 aa13.14□□□□□ -0.31
LIME1-202ENST00000444951 NKX2-5P52952 324 aaPredicted RBP13.14□□□□□ -0.31
LIME1-202ENST00000444951 RAB31Q13636 194 aa13.14□□□□□ -0.31
LIME1-202ENST00000444951 TOMM20LQ6UXN7 152 aa13.14□□□□□ -0.31
LIME1-202ENST00000444951 TMEM182Q6ZP80 229 aaPredicted RBP13.14□□□□□ -0.31
LIME1-202ENST00000444951 GPHB5Q86YW7 130 aa13.14□□□□□ -0.31
LIME1-202ENST00000444951 LINC00482Q8N8I6 264 aa13.14□□□□□ -0.31
LIME1-202ENST00000444951 HYLS1Q96M11 299 aa13.14□□□□□ -0.31
LIME1-202ENST00000444951 PBDC1Q9BVG4 233 aa13.14□□□□□ -0.31
LIME1-202ENST00000444951 OVOL1O14753 267 aa13.13□□□□□ -0.31
LIME1-202ENST00000444951 IL4P05112 153 aa13.13□□□□□ -0.31
LIME1-202ENST00000444951 LYZP61626 148 aa13.13□□□□□ -0.31
LIME1-202ENST00000444951 TM4SF20Q53R12 229 aa13.13□□□□□ -0.31
LIME1-202ENST00000444951 REC114Q7Z4M0 266 aa13.13□□□□□ -0.31
LIME1-202ENST00000444951 KCNRGQ8N5I3 272 aa13.13□□□□□ -0.31
LIME1-202ENST00000444951 BPIFCQ8NFQ6 507 aa13.13□□□□□ -0.31
LIME1-202ENST00000444951 ZNF414Q96IQ9 312 aa13.13□□□□□ -0.31
LIME1-202ENST00000444951 WDR61Q9GZS3 305 aaKnown RBP13.13□□□□□ -0.31
LIME1-202ENST00000444951 ARL6Q9H0F7 186 aa13.13□□□□□ -0.31
LIME1-202ENST00000444951 LSM4Q9Y4Z0 139 aaKnown RBP13.13□□□□□ -0.31
LIME1-202ENST00000444951 IGHV3-49A0A0A0MS15 119 aa13.12□□□□□ -0.31
LIME1-202ENST00000444951 A0A0D9SG52 128 aa13.12□□□□□ -0.31
LIME1-202ENST00000444951 IGLL1P15814 213 aa13.12□□□□□ -0.31
LIME1-202ENST00000444951 CD33P20138 364 aa13.12□□□□□ -0.31
LIME1-202ENST00000444951 EDN2P20800 178 aa13.12□□□□□ -0.31
LIME1-202ENST00000444951 ZNF345Q14585 488 aa13.12□□□□□ -0.31
LIME1-202ENST00000444951 MIC13Q5XKP0 118 aa13.12□□□□□ -0.31
LIME1-202ENST00000444951 RPL7L1Q6DKI1 246 aaKnown RBP13.12□□□□□ -0.31
LIME1-202ENST00000444951 TMUB2Q71RG4 321 aa13.12□□□□□ -0.31
LIME1-202ENST00000444951 OR51G1Q8NGK1 321 aa13.12□□□□□ -0.31
LIME1-202ENST00000444951 TMEM190Q8WZ59 177 aa13.12□□□□□ -0.31
LIME1-202ENST00000444951 DOK5Q9P104 306 aa13.12□□□□□ -0.31
LIME1-202ENST00000444951 BORCS7-ASMTA0A0B4J1R7 106 aa13.11□□□□□ -0.31
LIME1-202ENST00000444951 LGALSLQ3ZCW2 172 aaPredicted RBP13.11□□□□□ -0.31
LIME1-202ENST00000444951 ZNF709Q8N972 641 aa13.11□□□□□ -0.31
LIME1-202ENST00000444951 HSD17B11Q8NBQ5 300 aa13.11□□□□□ -0.31
LIME1-202ENST00000444951 OR9G4Q8NGQ1 327 aa13.11□□□□□ -0.31
LIME1-202ENST00000444951 ARPC5LQ9BPX5 153 aa13.11□□□□□ -0.31
LIME1-202ENST00000444951 RSG1Q9BU20 258 aa13.11□□□□□ -0.31
LIME1-202ENST00000444951 GGTLC1Q9BX51 225 aa13.11□□□□□ -0.31
LIME1-202ENST00000444951 NPCDR1Q9BY65 106 aa13.11□□□□□ -0.31
LIME1-202ENST00000444951 ZFAND3Q9H8U3 227 aa13.11□□□□□ -0.31
LIME1-202ENST00000444951 SLC45A2Q9UMX9 530 aa13.11□□□□□ -0.31
LIME1-202ENST00000444951 UFC1Q9Y3C8 167 aa13.11□□□□□ -0.31
LIME1-202ENST00000444951 SELENOKQ9Y6D0 94 aa13.11□□□□□ -0.31
LIME1-202ENST00000444951 IGHV3OR16-13A0A075B7E8 117 aa13.1□□□□□ -0.31
LIME1-202ENST00000444951 IGHV3-74A0A0B4J1X5 117 aa13.1□□□□□ -0.31
LIME1-202ENST00000444951 KANTRA0A1W2PQU2 76 aa13.1□□□□□ -0.31
LIME1-202ENST00000444951 LINC00869P0C866 280 aa13.1□□□□□ -0.31
LIME1-202ENST00000444951 ORM2P19652 201 aa13.1□□□□□ -0.31
LIME1-202ENST00000444951 SELENOTP62341 195 aa13.1□□□□□ -0.31
LIME1-202ENST00000444951 ZNF266Q14584 549 aa13.1□□□□□ -0.31
LIME1-202ENST00000444951 WFDC9Q8NEX5 89 aa13.1□□□□□ -0.31
LIME1-202ENST00000444951 OR1B1Q8NGR6 318 aa13.1□□□□□ -0.31
LIME1-202ENST00000444951 RNF125Q96EQ8 232 aa13.1□□□□□ -0.31
LIME1-202ENST00000444951 GINS3Q9BRX5 216 aa13.1□□□□□ -0.31
LIME1-202ENST00000444951 PEMTQ9UBM1 199 aa13.1□□□□□ -0.31
LIME1-202ENST00000444951 RFNGQ9Y644 331 aa13.1□□□□□ -0.31
LIME1-202ENST00000444951 COL7A1Q02388 2944 aa13.1□□□□□ -0.31
LIME1-202ENST00000444951 RYR3Q15413 4870 aa13.09□□□□□ -0.31
LIME1-202ENST00000444951 WI2-2373I1.2A0A1W2PRP0 233 aa13.09□□□□□ -0.31
LIME1-202ENST00000444951 BOLA2-SMG1P6H3BVE0 249 aa13.09□□□□□ -0.31
LIME1-202ENST00000444951 LGALS9O00182 355 aa13.09□□□□□ -0.31
LIME1-202ENST00000444951 TAAR5O14804 337 aa13.09□□□□□ -0.31
LIME1-202ENST00000444951 BCL2L11O43521 198 aa13.09□□□□□ -0.31
LIME1-202ENST00000444951 MPDU1O75352 247 aa13.09□□□□□ -0.31
LIME1-202ENST00000444951 OPCMLQ14982 345 aa13.09□□□□□ -0.31
LIME1-202ENST00000444951 USF2Q15853 346 aaPredicted RBP13.09□□□□□ -0.31
LIME1-202ENST00000444951 STPG3Q8N7X2 389 aa13.09□□□□□ -0.31
LIME1-202ENST00000444951 ELOVL1Q9BW60 279 aa13.09□□□□□ -0.31
LIME1-202ENST00000444951 ZNF471Q9BX82 626 aaPredicted RBP13.09□□□□□ -0.31
LIME1-202ENST00000444951 PXMP4Q9Y6I8 212 aa13.09□□□□□ -0.31
LIME1-202ENST00000444951 IGHV3-66A0A0C4DH42 116 aa13.08□□□□□ -0.32
LIME1-202ENST00000444951 TMEM213A2RRL7 107 aa13.08□□□□□ -0.32
LIME1-202ENST00000444951 C2orf70A6NJV1 201 aa13.08□□□□□ -0.32
LIME1-202ENST00000444951 SEC14L6B5MCN3 397 aa13.08□□□□□ -0.32
LIME1-202ENST00000444951 C17orf112F2Z3M2 114 aa13.08□□□□□ -0.32
LIME1-202ENST00000444951 SAP30O75446 220 aa13.08□□□□□ -0.32
LIME1-202ENST00000444951 OR5G3P0C626 314 aa13.08□□□□□ -0.32
LIME1-202ENST00000444951 C9orf62Q8N4C0 152 aa13.08□□□□□ -0.32
LIME1-202ENST00000444951 PPP1R14BQ96C90 147 aa13.08□□□□□ -0.32
LIME1-202ENST00000444951 METTL26Q96S19 204 aa13.08□□□□□ -0.32
LIME1-202ENST00000444951 DAZ1Q9NQZ3 744 aaKnown RBP13.08□□□□□ -0.32
LIME1-202ENST00000444951 CYTL1Q9NRR1 136 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms