RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 TOMM40O96008 361 aa16.34■□□□□ 0.21
HDLBP-220ENST00000442730 IL5P05113 134 aa16.34■□□□□ 0.21
HDLBP-220ENST00000442730 GPX4P36969 197 aaPredicted RBP16.34■□□□□ 0.21
HDLBP-220ENST00000442730 USF2Q15853 346 aaPredicted RBP16.34■□□□□ 0.21
HDLBP-220ENST00000442730 IAH1Q2TAA2 248 aaPredicted RBP16.34■□□□□ 0.21
HDLBP-220ENST00000442730 Q6ZWC4 215 aa16.34■□□□□ 0.21
HDLBP-220ENST00000442730 WFDC3Q8IUB2 231 aa16.34■□□□□ 0.21
HDLBP-220ENST00000442730 C12orf45Q8N5I9 185 aaPredicted RBP16.34■□□□□ 0.21
HDLBP-220ENST00000442730 FAM24BQ8N5W8 94 aa16.34■□□□□ 0.21
HDLBP-220ENST00000442730 OR4D5Q8NGN0 318 aa16.34■□□□□ 0.21
HDLBP-220ENST00000442730 CIB3Q96Q77 187 aaPredicted RBP16.34■□□□□ 0.21
HDLBP-220ENST00000442730 TENM2Q9NT68 2774 aa16.33■□□□□ 0.21
HDLBP-220ENST00000442730 DNASE2O00115 360 aaPredicted RBP16.33■□□□□ 0.2
HDLBP-220ENST00000442730 UBE2CO00762 179 aa16.33■□□□□ 0.2
HDLBP-220ENST00000442730 SYNGR2O43760 224 aa16.33■□□□□ 0.2
HDLBP-220ENST00000442730 IL4P05112 153 aa16.33■□□□□ 0.2
HDLBP-220ENST00000442730 RD3LP0DJH9 198 aa16.33■□□□□ 0.2
HDLBP-220ENST00000442730 GAMTQ14353 236 aa16.33■□□□□ 0.2
HDLBP-220ENST00000442730 DEFB135Q30KP9 77 aa16.33■□□□□ 0.2
HDLBP-220ENST00000442730 STPG3Q8N7X2 389 aa16.33■□□□□ 0.2
HDLBP-220ENST00000442730 GRAMD2BQ96HH9 432 aa16.33■□□□□ 0.2
HDLBP-220ENST00000442730 GPN1Q9HCN4 374 aaPredicted RBP16.33■□□□□ 0.2
HDLBP-220ENST00000442730 TP53TG1Q9Y2A0 90 aa16.33■□□□□ 0.2
HDLBP-220ENST00000442730 INMT-MINDY4F8WBC2 141 aa16.32■□□□□ 0.2
HDLBP-220ENST00000442730 WRBO00258 174 aa16.32■□□□□ 0.2
HDLBP-220ENST00000442730 SCGB1D2O95969 90 aa16.32■□□□□ 0.2
HDLBP-220ENST00000442730 HNRNPCP07910 306 aaKnown RBP eCLIP16.32■□□□□ 0.2
HDLBP-220ENST00000442730 NKX2-1P43699 371 aaPredicted RBP16.32■□□□□ 0.2
HDLBP-220ENST00000442730 ZBTB8BQ8NAP8 495 aaPredicted RBP16.32■□□□□ 0.2
HDLBP-220ENST00000442730 STXBP6Q8NFX7 210 aa16.32■□□□□ 0.2
HDLBP-220ENST00000442730 SLC35E1Q96K37 410 aa16.32■□□□□ 0.2
HDLBP-220ENST00000442730 RABAC1Q9UI14 185 aa16.32■□□□□ 0.2
HDLBP-220ENST00000442730 IGKV1D-37A0A075B6S9 117 aa16.31■□□□□ 0.2
HDLBP-220ENST00000442730 FAM25EA8MYX2 175 aa16.31■□□□□ 0.2
HDLBP-220ENST00000442730 PRAF2O60831 178 aa16.31■□□□□ 0.2
HDLBP-220ENST00000442730 PSG1P11464 419 aa16.31■□□□□ 0.2
HDLBP-220ENST00000442730 GLMPQ8WWB7 406 aa16.31■□□□□ 0.2
HDLBP-220ENST00000442730 LYSTQ99698 3801 aa16.3■□□□□ 0.2
HDLBP-220ENST00000442730 K7EQG2 157 aa16.3■□□□□ 0.2
HDLBP-220ENST00000442730 SPRY2O43597 315 aa16.3■□□□□ 0.2
HDLBP-220ENST00000442730 SSSCA1O60232 199 aa16.3■□□□□ 0.2
HDLBP-220ENST00000442730 DEFB131AP59861 70 aa16.3■□□□□ 0.2
HDLBP-220ENST00000442730 POLR2GP62487 172 aaKnown RBP eCLIP16.3■□□□□ 0.2
HDLBP-220ENST00000442730 RAB11AP62491 216 aa16.3■□□□□ 0.2
HDLBP-220ENST00000442730 ID3Q02535 119 aa16.3■□□□□ 0.2
HDLBP-220ENST00000442730 C16orf54Q6UWD8 224 aa16.3■□□□□ 0.2
HDLBP-220ENST00000442730 DCANP1Q8TF63 244 aa16.3■□□□□ 0.2
HDLBP-220ENST00000442730 MARVELD1Q9BSK0 173 aa16.3■□□□□ 0.2
HDLBP-220ENST00000442730 GSKIPQ9P0R6 139 aa16.3■□□□□ 0.2
HDLBP-220ENST00000442730 PAIP2BQ9ULR5 123 aaKnown RBP16.3■□□□□ 0.2
HDLBP-220ENST00000442730 C5orf51A6NDU8 294 aa16.29■□□□□ 0.2
HDLBP-220ENST00000442730 HELTA6NFD8 242 aa16.29■□□□□ 0.2
HDLBP-220ENST00000442730 ZFP92A6NM28 416 aa16.29■□□□□ 0.2
HDLBP-220ENST00000442730 PRSS46E5RG02 174 aa16.29■□□□□ 0.2
HDLBP-220ENST00000442730 H3BP45 60 aa16.29■□□□□ 0.2
HDLBP-220ENST00000442730 LEMD1Q68G75 181 aa16.29■□□□□ 0.2
HDLBP-220ENST00000442730 OR51G1Q8NGK1 321 aa16.29■□□□□ 0.2
HDLBP-220ENST00000442730 RNF183Q96D59 192 aa16.29■□□□□ 0.2
HDLBP-220ENST00000442730 RNF125Q96EQ8 232 aa16.29■□□□□ 0.2
HDLBP-220ENST00000442730 PTTG1O95997 202 aa16.28■□□□□ 0.2
HDLBP-220ENST00000442730 RPP30P78346 268 aaKnown RBP16.28■□□□□ 0.2
HDLBP-220ENST00000442730 ZNF90Q03938 601 aa16.28■□□□□ 0.2
HDLBP-220ENST00000442730 IL17DQ8TAD2 202 aa16.28■□□□□ 0.2
HDLBP-220ENST00000442730 RYR2Q92736 4967 aa16.27■□□□□ 0.2
HDLBP-220ENST00000442730 SNRPGP15A8MWD9 76 aa16.27■□□□□ 0.2
HDLBP-220ENST00000442730 BUB3O43684 328 aa16.27■□□□□ 0.2
HDLBP-220ENST00000442730 EIF2B2P49770 351 aaKnown RBP16.27■□□□□ 0.2
HDLBP-220ENST00000442730 CSTL1Q9H114 145 aa16.27■□□□□ 0.2
HDLBP-220ENST00000442730 RCL1Q9Y2P8 373 aaKnown RBP16.27■□□□□ 0.2
HDLBP-220ENST00000442730 SACSQ9NZJ4 4579 aa16.27■□□□□ 0.2
HDLBP-220ENST00000442730 IGKV1OR2-108A0A075B7D4 117 aa16.26■□□□□ 0.19
HDLBP-220ENST00000442730 SPANXN5Q5MJ07 72 aa16.26■□□□□ 0.19
HDLBP-220ENST00000442730 GSG1LQ6UXU4 331 aa16.26■□□□□ 0.19
HDLBP-220ENST00000442730 THAP8Q8NA92 274 aa16.26■□□□□ 0.19
HDLBP-220ENST00000442730 PBDC1Q9BVG4 233 aa16.26■□□□□ 0.19
HDLBP-220ENST00000442730 STRAPQ9Y3F4 350 aaKnown RBP16.26■□□□□ 0.19
HDLBP-220ENST00000442730 MBPP02686 304 aaPredicted RBP16.25■□□□□ 0.19
HDLBP-220ENST00000442730 FABP1P07148 127 aa16.25■□□□□ 0.19
HDLBP-220ENST00000442730 ZNF688P0C7X2 276 aa16.25■□□□□ 0.19
HDLBP-220ENST00000442730 OR8G2PQ6IF36 304 aa16.25■□□□□ 0.19
HDLBP-220ENST00000442730 C2orf50Q96LR7 162 aa16.25■□□□□ 0.19
HDLBP-220ENST00000442730 TRGV9Q99603 122 aa16.25■□□□□ 0.19
HDLBP-220ENST00000442730 A0A0J9YWU9 116 aa16.24■□□□□ 0.19
HDLBP-220ENST00000442730 GOSR2O14653 212 aa16.24■□□□□ 0.19
HDLBP-220ENST00000442730 NUP62P37198 522 aaPredicted RBP16.24■□□□□ 0.19
HDLBP-220ENST00000442730 AP2S1P53680 142 aaPredicted RBP16.24■□□□□ 0.19
HDLBP-220ENST00000442730 SIGLEC15Q6ZMC9 328 aa16.24■□□□□ 0.19
HDLBP-220ENST00000442730 RAB40CQ96S21 281 aa16.24■□□□□ 0.19
HDLBP-220ENST00000442730 PSENENQ9NZ42 101 aa16.24■□□□□ 0.19
HDLBP-220ENST00000442730 LYZP61626 148 aa16.23■□□□□ 0.19
HDLBP-220ENST00000442730 OR2F1Q13607 317 aa16.23■□□□□ 0.19
HDLBP-220ENST00000442730 ACOT7LQ6ZUV0 252 aa16.23■□□□□ 0.19
HDLBP-220ENST00000442730 SMIM8Q96KF7 97 aa16.23■□□□□ 0.19
HDLBP-220ENST00000442730 LSM5Q9Y4Y9 91 aaKnown RBP16.23■□□□□ 0.19
HDLBP-220ENST00000442730 LCE6AA0A183 80 aa16.22■□□□□ 0.19
HDLBP-220ENST00000442730 CA1P00915 261 aaPredicted RBP16.22■□□□□ 0.19
HDLBP-220ENST00000442730 S100A10P60903 97 aa16.22■□□□□ 0.19
HDLBP-220ENST00000442730 EWSR1Q01844 656 aaKnown RBP eCLIP16.22■□□□□ 0.19
HDLBP-220ENST00000442730 TRPT1Q86TN4 253 aaKnown RBP16.22■□□□□ 0.19
HDLBP-220ENST00000442730 GATAD1Q8WUU5 269 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms