RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 GPR146Q96CH1 333 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 ZNF414Q96IQ9 312 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 HRH4Q9H3N8 390 aa5.71□□□□□ -1.49
CD44-211ENST00000442151 DNAH7Q8WXX0 4024 aa5.71□□□□□ -1.5
CD44-211ENST00000442151 IGHV3OR16-13A0A075B7E8 117 aa5.71□□□□□ -1.5
CD44-211ENST00000442151 IGHV3-74A0A0B4J1X5 117 aa5.71□□□□□ -1.5
CD44-211ENST00000442151 FABP12A6NFH5 140 aa5.71□□□□□ -1.5
CD44-211ENST00000442151 ALDH3B2P48448 385 aa5.71□□□□□ -1.5
CD44-211ENST00000442151 SMCO1Q147U7 214 aa5.71□□□□□ -1.5
CD44-211ENST00000442151 IZUMO4Q1ZYL8 232 aa5.71□□□□□ -1.5
CD44-211ENST00000442151 TIGITQ495A1 244 aa5.71□□□□□ -1.5
CD44-211ENST00000442151 SPATA31B1PQ5VZV4 182 aa5.71□□□□□ -1.5
CD44-211ENST00000442151 C16orf54Q6UWD8 224 aa5.71□□□□□ -1.5
CD44-211ENST00000442151 RTBDNQ9BSG5 229 aaPredicted RBP5.71□□□□□ -1.5
CD44-211ENST00000442151 CACNG5Q9UF02 275 aa5.71□□□□□ -1.5
CD44-211ENST00000442151 SACSQ9NZJ4 4579 aa5.7□□□□□ -1.5
CD44-211ENST00000442151 A0A0B4J2A0 478 aa5.7□□□□□ -1.5
CD44-211ENST00000442151 A0A1B0GU03 582 aa5.7□□□□□ -1.5
CD44-211ENST00000442151 ANKRD20A5PA0PJZ0 165 aa5.7□□□□□ -1.5
CD44-211ENST00000442151 TOMM40O96008 361 aa5.7□□□□□ -1.5
CD44-211ENST00000442151 KLF9Q13886 244 aaPredicted RBP5.7□□□□□ -1.5
CD44-211ENST00000442151 OR8G2PQ6IF36 304 aa5.7□□□□□ -1.5
CD44-211ENST00000442151 OR1S1Q8NH92 325 aa5.7□□□□□ -1.5
CD44-211ENST00000442151 SLC35E1Q96K37 410 aa5.7□□□□□ -1.5
CD44-211ENST00000442151 CIB3Q96Q77 187 aaPredicted RBP5.7□□□□□ -1.5
CD44-211ENST00000442151 MCUBQ9NWR8 336 aa5.7□□□□□ -1.5
CD44-211ENST00000442151 SHPKQ9UHJ6 478 aa5.7□□□□□ -1.5
CD44-211ENST00000442151 RNF24Q9Y225 148 aa5.7□□□□□ -1.5
CD44-211ENST00000442151 U3KQE9 123 aa5.7□□□□□ -1.5
CD44-211ENST00000442151 CSMD3Q7Z407 3707 aa5.7□□□□□ -1.5
CD44-211ENST00000442151 IGHV3-66A0A0C4DH42 116 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 CTDSP2O14595 271 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 APOHP02749 345 aaPredicted RBP5.69□□□□□ -1.5
CD44-211ENST00000442151 IGLC1P0CG04 106 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 SLC25A6P12236 298 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 S100A5P33763 92 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 RND2P52198 227 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 NMSQ5H8A3 153 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 GGNBP1Q5YKI7 109 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 PRSS54Q6PEW0 395 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 TRPT1Q86TN4 253 aaKnown RBP5.69□□□□□ -1.5
CD44-211ENST00000442151 OR4D10Q8NGI6 311 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 OR51S1Q8NGJ8 323 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 OR51G1Q8NGK1 321 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 OR4C16Q8NGL9 310 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 NPIPB3Q92617 1050 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 SLC25A21Q9BQT8 299 aaPredicted RBP5.69□□□□□ -1.5
CD44-211ENST00000442151 MIXL1Q9H2W2 232 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 FNDC4Q9H6D8 234 aaPredicted RBP5.69□□□□□ -1.5
CD44-211ENST00000442151 TBC1D24Q9ULP9 559 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 TENM2Q9NT68 2774 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 TRAV10A0A0B4J240 114 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 TEX48A0A1B0GUV7 120 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 TMEM189A5PLL7 270 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 SMIM9A6NGZ8 99 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 SNRPGP15A8MWD9 76 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 FAM90A26D6RGX4 464 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 IGKV1-17P01599 117 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 IL4P05112 153 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 SMIM18P0DKX4 95 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 C1orf194Q5T5A4 169 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 LEMD1Q68G75 181 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 SIGLEC15Q6ZMC9 328 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 Q6ZRM9 215 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 DTD1Q8TEA8 209 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 PPP1R14BQ96C90 147 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 ACY3Q96HD9 319 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 RAB40CQ96S21 281 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 LYSTQ99698 3801 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 NAA50Q9GZZ1 169 aaKnown RBP5.69□□□□□ -1.5
CD44-211ENST00000442151 HSPB7Q9UBY9 170 aa5.69□□□□□ -1.5
CD44-211ENST00000442151 A0A0G2JRQ6 117 aa5.68□□□□□ -1.5
CD44-211ENST00000442151 ZFP92A6NM28 416 aa5.68□□□□□ -1.5
CD44-211ENST00000442151 ZNF688P0C7X2 276 aa5.68□□□□□ -1.5
CD44-211ENST00000442151 NKX2-1P43699 371 aaPredicted RBP5.68□□□□□ -1.5
CD44-211ENST00000442151 MEOX2P50222 304 aa5.68□□□□□ -1.5
CD44-211ENST00000442151 MLANAQ16655 118 aa5.68□□□□□ -1.5
CD44-211ENST00000442151 TMEM128Q5BJH2 165 aa5.68□□□□□ -1.5
CD44-211ENST00000442151 ACTL10Q5JWF8 245 aa5.68□□□□□ -1.5
CD44-211ENST00000442151 MCFD2Q8NI22 146 aa5.68□□□□□ -1.5
CD44-211ENST00000442151 DYNC2LI1Q8TCX1 351 aa5.68□□□□□ -1.5
CD44-211ENST00000442151 GLMPQ8WWB7 406 aa5.68□□□□□ -1.5
CD44-211ENST00000442151 NRN1Q9NPD7 142 aa5.68□□□□□ -1.5
CD44-211ENST00000442151 TMED3Q9Y3Q3 217 aa5.68□□□□□ -1.5
CD44-211ENST00000442151 BIRC6Q9NR09 4857 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 BUB3O43684 328 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 INPP1P49441 399 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 NANOS2P60321 138 aaKnown RBP5.67□□□□□ -1.5
CD44-211ENST00000442151 CNPY1Q3B7I2 92 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 PSMG4Q5JS54 123 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 TOMM5Q8N4H5 51 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 DCANP1Q8TF63 244 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 CLUHP3Q96NS8 147 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 ARPC5LQ9BPX5 153 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 SLC45A2Q9UMX9 530 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 ZNF705EA8MWA4 302 aaPredicted RBP5.67□□□□□ -1.5
CD44-211ENST00000442151 PSG1P11464 419 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 TNFSF8P32971 234 aa5.67□□□□□ -1.5
CD44-211ENST00000442151 UBE2MP61081 183 aaKnown RBP5.67□□□□□ -1.5
CD44-211ENST00000442151 SUPT4H1P63272 117 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms