RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 ZFP82Q8N141 532 aa7.28□□□□□ -1.24
HDAC6-209ENST00000440653 OR5AU1Q8NGC0 362 aa7.28□□□□□ -1.24
HDAC6-209ENST00000440653 OR51G1Q8NGK1 321 aa7.28□□□□□ -1.24
HDAC6-209ENST00000440653 IGFBPL1Q8WX77 278 aa7.28□□□□□ -1.24
HDAC6-209ENST00000440653 MISP3Q96FF7 219 aa7.28□□□□□ -1.24
HDAC6-209ENST00000440653 ZNF48Q96MX3 618 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-209ENST00000440653 SRD5A3Q9H8P0 318 aa7.28□□□□□ -1.24
HDAC6-209ENST00000440653 RNF24Q9Y225 148 aa7.28□□□□□ -1.24
HDAC6-209ENST00000440653 URGCP-MRPS24S4R325 110 aa7.28□□□□□ -1.24
HDAC6-209ENST00000440653 IGKV1D-37A0A075B6S9 117 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 TGIF2-C20orf24A0A0A6YYL0 155 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 NPIPB5A8MRT5 1133 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 E7EUB6 86 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 NDUFS8O00217 210 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 EIF3GO75821 320 aaKnown RBP eCLIP7.27□□□□□ -1.25
HDAC6-209ENST00000440653 CDKN1AP38936 164 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 PDLIM4P50479 330 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 AKR1D1P51857 326 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 LGALS4P56470 323 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 ARF6P62330 175 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 HCP5Q6MZN7 132 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 VMO1Q7Z5L0 202 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 LINC00518Q8N0U6 118 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 OR4X1Q8NH49 305 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 NPIPB3Q92617 1050 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 SMIM12Q96EX1 92 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 SFRP2Q96HF1 295 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 SLC25A2Q9BXI2 301 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 SIRPDQ9H106 197 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 FBXL15Q9H469 300 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 LPAR2Q9HBW0 351 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 TNFRSF19Q9NS68 423 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 C1RLQ9NZP8 487 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 CDC42EP3Q9UKI2 254 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 POLR3KQ9Y2Y1 108 aaPredicted RBP7.27□□□□□ -1.25
HDAC6-209ENST00000440653 CR1P17927 2039 aa7.27□□□□□ -1.25
HDAC6-209ENST00000440653 OVOL3O00110 214 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 LY6HO94772 140 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 CNIH1O95406 144 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 S100A9P06702 114 aaKnown RBP7.26□□□□□ -1.25
HDAC6-209ENST00000440653 PFN1P07737 140 aaKnown RBP7.26□□□□□ -1.25
HDAC6-209ENST00000440653 OR10J4P0C629 311 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 NPPCP23582 126 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 S100A7P31151 101 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 GNG4P50150 75 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 UBE2E1P51965 193 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 TAS2R60P59551 318 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 EBI3Q14213 229 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 C5orf64Q2M2E5 130 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 TIGITQ495A1 244 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 Q8N6K4 173 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 OR2T6Q8NHC8 308 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 TMEM37Q8WXS4 190 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 FAM167A-AS1Q96KT0 104 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 PAXXQ9BUH6 204 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 ZNF355PQ9NSJ1 428 aa7.26□□□□□ -1.25
HDAC6-209ENST00000440653 BIRC6Q9NR09 4857 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 TRAV30A0A087WSZ9 112 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 A0A1W2PPQ1 181 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 GGTLC3B5MD39 225 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 HYPMO75409 117 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 REG1AP05451 166 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 CNTFRP26992 372 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 BRS3P32247 399 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 RPL35P42766 123 aaKnown RBP7.25□□□□□ -1.25
HDAC6-209ENST00000440653 CNN1P51911 297 aaKnown RBP7.25□□□□□ -1.25
HDAC6-209ENST00000440653 SNRPEP62304 92 aaKnown RBP7.25□□□□□ -1.25
HDAC6-209ENST00000440653 FABP9Q0Z7S8 132 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 FOXL1Q12952 345 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 COX19Q49B96 90 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 TEX38Q6PEX7 206 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 OR10G8Q8NGN5 311 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 ARPC1AQ92747 370 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 ZNF503Q96F45 646 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 EAF1Q96JC9 268 aaPredicted RBP7.25□□□□□ -1.25
HDAC6-209ENST00000440653 RITA1Q96K30 269 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 RASL11BQ9BPW5 248 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 PIMREGQ9BSJ6 248 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 OR51M1Q9H341 326 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 THYN1Q9P016 225 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 HIGD1AQ9Y241 93 aa7.25□□□□□ -1.25
HDAC6-209ENST00000440653 TRBV20OR9-2A0A075B6H5 130 aa7.24□□□□□ -1.25
HDAC6-209ENST00000440653 TRBV9A0A0B4J1U6 114 aa7.24□□□□□ -1.25
HDAC6-209ENST00000440653 RNF223E7ERA6 249 aa7.24□□□□□ -1.25
HDAC6-209ENST00000440653 I3L2K1 104 aa7.24□□□□□ -1.25
HDAC6-209ENST00000440653 CD5LO43866 347 aa7.24□□□□□ -1.25
HDAC6-209ENST00000440653 HIST1H2BKO60814 126 aa7.24□□□□□ -1.25
HDAC6-209ENST00000440653 TOX4O94842 621 aa7.24□□□□□ -1.25
HDAC6-209ENST00000440653 HLA-DRB1P01911 266 aa7.24□□□□□ -1.25
HDAC6-209ENST00000440653 HIST1H2BJP06899 126 aa7.24□□□□□ -1.25
HDAC6-209ENST00000440653 IGLC1P0CG04 106 aa7.24□□□□□ -1.25
HDAC6-209ENST00000440653 HIST1H1BP16401 226 aaKnown RBP7.24□□□□□ -1.25
HDAC6-209ENST00000440653 TMEM11P17152 192 aa7.24□□□□□ -1.25
HDAC6-209ENST00000440653 HIST1H2BOP23527 126 aa7.24□□□□□ -1.25
HDAC6-209ENST00000440653 HIST1H2BBP33778 126 aa7.24□□□□□ -1.25
HDAC6-209ENST00000440653 MEOX2P50222 304 aa7.24□□□□□ -1.25
HDAC6-209ENST00000440653 MFAP2P55001 183 aa7.24□□□□□ -1.25
HDAC6-209ENST00000440653 HIST1H2BDP58876 126 aa7.24□□□□□ -1.25
HDAC6-209ENST00000440653 HIST1H2BCP62807 126 aa7.24□□□□□ -1.25
HDAC6-209ENST00000440653 SSBP2P81877 361 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms