RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 RCHY1Q96PM5 261 aa12.58□□□□□ -0.4
SCARF1-203ENST00000434376 NRN1Q9NPD7 142 aa12.58□□□□□ -0.4
SCARF1-203ENST00000434376 TMEM14BQ9NUH8 114 aa12.58□□□□□ -0.4
SCARF1-203ENST00000434376 SELENOKQ9Y6D0 94 aa12.58□□□□□ -0.4
SCARF1-203ENST00000434376 SH2D7A6NKC9 451 aaPredicted RBP12.58□□□□□ -0.4
SCARF1-203ENST00000434376 APOBEC3AP31941 199 aaPredicted RBP12.58□□□□□ -0.4
SCARF1-203ENST00000434376 FOXL1Q12952 345 aa12.58□□□□□ -0.4
SCARF1-203ENST00000434376 TMEM144Q7Z5S9 345 aa12.58□□□□□ -0.4
SCARF1-203ENST00000434376 CENPVQ7Z7K6 275 aaPredicted RBP12.58□□□□□ -0.4
SCARF1-203ENST00000434376 FNDC4Q9H6D8 234 aaPredicted RBP12.58□□□□□ -0.4
SCARF1-203ENST00000434376 NCBP2LA6PVI3 153 aaKnown RBP12.57□□□□□ -0.4
SCARF1-203ENST00000434376 COX7A2P2O60397 106 aa12.57□□□□□ -0.4
SCARF1-203ENST00000434376 RBP4P02753 201 aa12.57□□□□□ -0.4
SCARF1-203ENST00000434376 OR1L8Q8NGR8 309 aa12.57□□□□□ -0.4
SCARF1-203ENST00000434376 BORCS7Q96B45 105 aa12.57□□□□□ -0.4
SCARF1-203ENST00000434376 MTORP42345 2549 aa12.57□□□□□ -0.4
SCARF1-203ENST00000434376 K7EN84 100 aa12.57□□□□□ -0.4
SCARF1-203ENST00000434376 GNG4P50150 75 aa12.57□□□□□ -0.4
SCARF1-203ENST00000434376 Q56UQ5 140 aa12.57□□□□□ -0.4
SCARF1-203ENST00000434376 FAM169BQ8N8A8 192 aa12.57□□□□□ -0.4
SCARF1-203ENST00000434376 RAB9BQ9NP90 201 aa12.57□□□□□ -0.4
SCARF1-203ENST00000434376 SSUH2Q9Y2M2 353 aa12.57□□□□□ -0.4
SCARF1-203ENST00000434376 LINC00310P59036 64 aa12.57□□□□□ -0.4
SCARF1-203ENST00000434376 ZNF672Q499Z4 452 aaPredicted RBP12.57□□□□□ -0.4
SCARF1-203ENST00000434376 UBTD1Q9HAC8 227 aa12.57□□□□□ -0.4
SCARF1-203ENST00000434376 IGHV1-8P0DP01 117 aa12.56□□□□□ -0.4
SCARF1-203ENST00000434376 UQCRFS1P47985 274 aa12.56□□□□□ -0.4
SCARF1-203ENST00000434376 OR4C13Q8NGP0 309 aa12.56□□□□□ -0.4
SCARF1-203ENST00000434376 SLC25A33Q9BSK2 321 aa12.56□□□□□ -0.4
SCARF1-203ENST00000434376 IL36BQ9NZH7 164 aa12.56□□□□□ -0.4
SCARF1-203ENST00000434376 CXorf1O96002 111 aa12.56□□□□□ -0.4
SCARF1-203ENST00000434376 TCTEX1D1Q8N7M0 179 aa12.56□□□□□ -0.4
SCARF1-203ENST00000434376 FAM222BQ8WU58 562 aa12.56□□□□□ -0.4
SCARF1-203ENST00000434376 CENPWQ5EE01 88 aa12.55□□□□□ -0.4
SCARF1-203ENST00000434376 C1orf174Q8IYL3 243 aa12.55□□□□□ -0.4
SCARF1-203ENST00000434376 NUP37Q8NFH4 326 aa12.55□□□□□ -0.4
SCARF1-203ENST00000434376 ADTRPQ96IZ2 230 aa12.55□□□□□ -0.4
SCARF1-203ENST00000434376 RNASE2P10153 161 aaKnown RBP12.55□□□□□ -0.4
SCARF1-203ENST00000434376 KIR2DS2P43631 304 aa12.55□□□□□ -0.4
SCARF1-203ENST00000434376 PPOXP50336 477 aa12.55□□□□□ -0.4
SCARF1-203ENST00000434376 LYZP61626 148 aa12.55□□□□□ -0.4
SCARF1-203ENST00000434376 PRCDQ00LT1 54 aa12.55□□□□□ -0.4
SCARF1-203ENST00000434376 TEX43Q6ZNM6 134 aa12.55□□□□□ -0.4
SCARF1-203ENST00000434376 EAF1Q96JC9 268 aaPredicted RBP12.55□□□□□ -0.4
SCARF1-203ENST00000434376 C20orf144Q9BQM9 153 aa12.55□□□□□ -0.4
SCARF1-203ENST00000434376 TP73-AS1Q9UF72 201 aa12.55□□□□□ -0.4
SCARF1-203ENST00000434376 A0A1W2PPI3 338 aa12.55□□□□□ -0.4
SCARF1-203ENST00000434376 STAG3L2P0CL84 134 aa12.55□□□□□ -0.4
SCARF1-203ENST00000434376 STAG3L3P0CL85 134 aa12.55□□□□□ -0.4
SCARF1-203ENST00000434376 CAMPP49913 170 aa12.55□□□□□ -0.4
SCARF1-203ENST00000434376 TMPRSS3P57727 454 aa12.55□□□□□ -0.4
SCARF1-203ENST00000434376 IGF2-ASQ6U949 168 aa12.55□□□□□ -0.4
SCARF1-203ENST00000434376 ACANP16112 2415 aa12.54□□□□□ -0.4
SCARF1-203ENST00000434376 S100A7P31151 101 aa12.54□□□□□ -0.4
SCARF1-203ENST00000434376 ZNF355PQ9NSJ1 428 aa12.54□□□□□ -0.4
SCARF1-203ENST00000434376 FOXA2Q9Y261 457 aaPredicted RBP12.54□□□□□ -0.4
SCARF1-203ENST00000434376 LAMTOR2Q9Y2Q5 125 aa12.54□□□□□ -0.4
SCARF1-203ENST00000434376 WASHC3Q9Y3C0 194 aa12.54□□□□□ -0.4
SCARF1-203ENST00000434376 HELTA6NFD8 242 aa12.54□□□□□ -0.4
SCARF1-203ENST00000434376 NHLH1Q02575 133 aa12.54□□□□□ -0.4
SCARF1-203ENST00000434376 VAMP3Q15836 100 aa12.54□□□□□ -0.4
SCARF1-203ENST00000434376 RNASE8Q8TDE3 154 aaKnown RBP12.54□□□□□ -0.4
SCARF1-203ENST00000434376 MT-CO2P00403 227 aa12.54□□□□□ -0.4
SCARF1-203ENST00000434376 VMA21Q3ZAQ7 101 aa12.54□□□□□ -0.4
SCARF1-203ENST00000434376 TIGITQ495A1 244 aa12.54□□□□□ -0.4
SCARF1-203ENST00000434376 RNASEKQ6P5S7 137 aaKnown RBP12.54□□□□□ -0.4
SCARF1-203ENST00000434376 OR4B1Q8NGF8 309 aa12.54□□□□□ -0.4
SCARF1-203ENST00000434376 IGHV3OR16-13A0A075B7E8 117 aa12.53□□□□□ -0.4
SCARF1-203ENST00000434376 IGHV2-26A0A0B4J1V2 119 aa12.53□□□□□ -0.4
SCARF1-203ENST00000434376 IGHV3-74A0A0B4J1X5 117 aa12.53□□□□□ -0.4
SCARF1-203ENST00000434376 CBY3A6NI87 242 aa12.53□□□□□ -0.4
SCARF1-203ENST00000434376 GPX1P07203 203 aa12.53□□□□□ -0.4
SCARF1-203ENST00000434376 GPR6P46095 362 aaPredicted RBP12.53□□□□□ -0.4
SCARF1-203ENST00000434376 TEX36Q5VZQ5 186 aa12.53□□□□□ -0.4
SCARF1-203ENST00000434376 VKORC1Q9BQB6 163 aa12.53□□□□□ -0.4
SCARF1-203ENST00000434376 ZFP30Q9Y2G7 519 aa12.53□□□□□ -0.4
SCARF1-203ENST00000434376 CD99P14209 185 aa12.53□□□□□ -0.4
SCARF1-203ENST00000434376 RNF2Q99496 336 aa12.53□□□□□ -0.4
SCARF1-203ENST00000434376 TMEM133Q9H2Q1 129 aa12.53□□□□□ -0.4
SCARF1-203ENST00000434376 ZNF835Q9Y2P0 537 aa12.53□□□□□ -0.4
SCARF1-203ENST00000434376 C22orf46C9J442 243 aa12.52□□□□□ -0.4
SCARF1-203ENST00000434376 HSBP1O75506 76 aa12.52□□□□□ -0.4
SCARF1-203ENST00000434376 UQCR10Q9UDW1 63 aa12.52□□□□□ -0.4
SCARF1-203ENST00000434376 TIMM23O14925 209 aa12.52□□□□□ -0.41
SCARF1-203ENST00000434376 C3orf79P0CE67 100 aa12.52□□□□□ -0.41
SCARF1-203ENST00000434376 TPPP3Q9BW30 176 aa12.52□□□□□ -0.41
SCARF1-203ENST00000434376 HYPMO75409 117 aa12.52□□□□□ -0.41
SCARF1-203ENST00000434376 LINC00614P0C842 121 aa12.52□□□□□ -0.41
SCARF1-203ENST00000434376 RPL27AP46776 148 aaKnown RBP12.52□□□□□ -0.41
SCARF1-203ENST00000434376 YPEL3P61236 119 aaPredicted RBP12.52□□□□□ -0.41
SCARF1-203ENST00000434376 PARD6GQ9BYG4 376 aaPredicted RBP12.52□□□□□ -0.41
SCARF1-203ENST00000434376 PRSS46E5RG02 174 aa12.51□□□□□ -0.41
SCARF1-203ENST00000434376 CD69Q07108 199 aa12.51□□□□□ -0.41
SCARF1-203ENST00000434376 OR4C5Q8NGB2 326 aa12.51□□□□□ -0.41
SCARF1-203ENST00000434376 SSBP4Q9BWG4 385 aaPredicted RBP12.51□□□□□ -0.41
SCARF1-203ENST00000434376 ZNF331Q9NQX6 463 aaPredicted RBP12.51□□□□□ -0.41
SCARF1-203ENST00000434376 CCL25O15444 150 aa12.51□□□□□ -0.41
SCARF1-203ENST00000434376 USF1P22415 310 aaPredicted RBP12.51□□□□□ -0.41
SCARF1-203ENST00000434376 RPL19P84098 196 aaKnown RBP12.51□□□□□ -0.41
SCARF1-203ENST00000434376 LINC00305Q7Z4B0 112 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms