RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 TAS2R60P59551 318 aa6.71□□□□□ -1.33
CD44-208ENST00000428726 UBE2L3P68036 154 aaKnown RBP6.71□□□□□ -1.33
CD44-208ENST00000428726 TCF24Q7RTU0 167 aa6.71□□□□□ -1.33
CD44-208ENST00000428726 DYNAPQ8N1N2 210 aa6.71□□□□□ -1.33
CD44-208ENST00000428726 ZNF503Q96F45 646 aa6.71□□□□□ -1.33
CD44-208ENST00000428726 C17orf77Q96MU5 243 aa6.71□□□□□ -1.33
CD44-208ENST00000428726 TXNDC17Q9BRA2 123 aa6.71□□□□□ -1.33
CD44-208ENST00000428726 TPPP3Q9BW30 176 aa6.71□□□□□ -1.33
CD44-208ENST00000428726 WNT10AQ9GZT5 417 aa6.71□□□□□ -1.33
CD44-208ENST00000428726 NGBQ9NPG2 151 aa6.71□□□□□ -1.33
CD44-208ENST00000428726 ZNF355PQ9NSJ1 428 aa6.71□□□□□ -1.33
CD44-208ENST00000428726 POLR3KQ9Y2Y1 108 aaPredicted RBP6.71□□□□□ -1.33
CD44-208ENST00000428726 HECTD1Q9ULT8 2610 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 FNDC10F2Z333 226 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 CORTO00230 105 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 STAG3L2P0CL84 134 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 STAG3L3P0CL85 134 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 ATP5IP56385 69 aaPredicted RBP6.71□□□□□ -1.34
CD44-208ENST00000428726 ERHP84090 104 aaKnown RBP6.71□□□□□ -1.34
CD44-208ENST00000428726 ZNF124Q15973 351 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 ST6GALNAC3Q8NDV1 305 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 ANAPC16Q96DE5 110 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 SFRP2Q96HF1 295 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 DOPEY1Q5JWR5 2465 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 GGTLC3B5MD39 225 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 ZNF207O43670 478 aaKnown RBP6.71□□□□□ -1.34
CD44-208ENST00000428726 CXorf1O96002 111 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 GPR6P46095 362 aaPredicted RBP6.71□□□□□ -1.34
CD44-208ENST00000428726 PRCDQ00LT1 54 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 MAJINQ3KP22 176 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 KCNIP4Q6PIL6 250 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 ZNF833PQ6ZTB9 187 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 TMEM219Q86XT9 240 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 BTF3L4Q96K17 158 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 VKORC1Q9BQB6 163 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 TMEM133Q9H2Q1 129 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 MSRB2Q9Y3D2 182 aa6.71□□□□□ -1.34
CD44-208ENST00000428726 C2CD3Q4AC94 2353 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 IGKV3-7A0A075B6H7 116 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 SNURFLB1AK76 121 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 COX7A2P2O60397 106 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 ZFP36P26651 326 aaKnown RBP6.7□□□□□ -1.34
CD44-208ENST00000428726 CAMPP49913 170 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 CENPWQ5EE01 88 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 OR4C13Q8NGP0 309 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 OR1L8Q8NGR8 309 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 OSR1Q8TAX0 266 aaPredicted RBP6.7□□□□□ -1.34
CD44-208ENST00000428726 SSBP4Q9BWG4 385 aaPredicted RBP6.7□□□□□ -1.34
CD44-208ENST00000428726 BET1LQ9NYM9 111 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 H0Y8G0 127 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 TCTAP57738 103 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 RHOBP62745 196 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 ACTL10Q5JWF8 245 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 BRD3OSQ6XYD6 125 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 Q6ZWC4 215 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 LINC00305Q7Z4B0 112 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 EXOC3-AS1Q8N2X6 119 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 OR5B3Q8NH48 314 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 CMTM2Q8TAZ6 248 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 SLC35E1Q96K37 410 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 PYGO2Q9BRQ0 406 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 NAGKQ9UJ70 344 aa6.7□□□□□ -1.34
CD44-208ENST00000428726 PRRC2AP48634 2157 aaKnown RBP6.7□□□□□ -1.34
CD44-208ENST00000428726 TMSB15BA0A087X1C1 80 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 A0A1W2PN81 502 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 MT-CO2P00403 227 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 NPSP0C0P6 89 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 CA7P43166 264 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 PATE2Q6UY27 113 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 LCNL1Q6ZST4 164 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 GBGT1Q8N5D6 347 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 NDUFAF3Q9BU61 184 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 MCRIP2Q9BUT9 160 aaKnown RBP6.69□□□□□ -1.34
CD44-208ENST00000428726 WASHC3Q9Y3C0 194 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 JMJD1CQ15652 2540 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 IGHV1-3A0A0C4DH29 117 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 LINC01548A6NM66 108 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 M0QZ24 198 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 COL8A1P27658 744 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 IQCJQ1A5X6 159 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 TMEM155Q4W5P6 130 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 FAM120AOSQ5T036 256 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 LCN12Q6JVE5 192 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 OR1L6Q8NGR2 347 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 MRPL18Q9H0U6 180 aaKnown RBP6.69□□□□□ -1.34
CD44-208ENST00000428726 NAT8BQ9UHF3 227 aa6.69□□□□□ -1.34
CD44-208ENST00000428726 HELTA6NFD8 242 aa6.68□□□□□ -1.34
CD44-208ENST00000428726 TNFRSF13BO14836 293 aaPredicted RBP6.68□□□□□ -1.34
CD44-208ENST00000428726 IGLV2-23P01705 113 aa6.68□□□□□ -1.34
CD44-208ENST00000428726 CRISP2P16562 243 aa6.68□□□□□ -1.34
CD44-208ENST00000428726 ZNF137PP52743 207 aa6.68□□□□□ -1.34
CD44-208ENST00000428726 CD69Q07108 199 aa6.68□□□□□ -1.34
CD44-208ENST00000428726 C2orf83Q53S99 150 aa6.68□□□□□ -1.34
CD44-208ENST00000428726 FAM71F2Q6NXP2 309 aa6.68□□□□□ -1.34
CD44-208ENST00000428726 OR5AN1Q8NGI8 311 aa6.68□□□□□ -1.34
CD44-208ENST00000428726 OR10G8Q8NGN5 311 aa6.68□□□□□ -1.34
CD44-208ENST00000428726 TMEM186Q96B77 213 aa6.68□□□□□ -1.34
CD44-208ENST00000428726 RCHY1Q96PM5 261 aa6.68□□□□□ -1.34
CD44-208ENST00000428726 NDUFA4L2Q9NRX3 87 aa6.68□□□□□ -1.34
CD44-208ENST00000428726 B9A039 149 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms