RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 WFDC11Q8NEX6 87 aa8.73□□□□□ -1.01
TCOF1-204ENST00000427724 GATAD1Q8WUU5 269 aa8.73□□□□□ -1.01
TCOF1-204ENST00000427724 SFRP2Q96HF1 295 aa8.73□□□□□ -1.01
TCOF1-204ENST00000427724 BBC3Q96PG8 261 aaPredicted RBP8.73□□□□□ -1.01
TCOF1-204ENST00000427724 NPVFQ9HCQ7 196 aa8.73□□□□□ -1.01
TCOF1-204ENST00000427724 MOB4Q9Y3A3 225 aa8.73□□□□□ -1.01
TCOF1-204ENST00000427724 SHISA9B4DS77 424 aa8.73□□□□□ -1.01
TCOF1-204ENST00000427724 DKK1O94907 266 aa8.73□□□□□ -1.01
TCOF1-204ENST00000427724 IL15RAQ13261 267 aa8.73□□□□□ -1.01
TCOF1-204ENST00000427724 SEM1Q6ZVN7 128 aa8.73□□□□□ -1.01
TCOF1-204ENST00000427724 RAMP3O60896 148 aa8.73□□□□□ -1.01
TCOF1-204ENST00000427724 NAPSAO96009 420 aa8.73□□□□□ -1.01
TCOF1-204ENST00000427724 ADMP35318 185 aa8.73□□□□□ -1.01
TCOF1-204ENST00000427724 TCF19Q9Y242 345 aa8.73□□□□□ -1.01
TCOF1-204ENST00000427724 HELTA6NFD8 242 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 CORTO00230 105 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 APCSP02743 223 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 MFAP2P55001 183 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 TMEM50AO95807 157 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 CXorf1O96002 111 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 PRTN3P24158 256 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 DAZAP2Q15038 168 aaPredicted RBP8.72□□□□□ -1.01
TCOF1-204ENST00000427724 C3orf36Q3SXR2 165 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 CD177Q8N6Q3 437 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 OR2D3Q8NGH3 330 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 OSR1Q8TAX0 266 aaPredicted RBP8.72□□□□□ -1.01
TCOF1-204ENST00000427724 RAX2Q96IS3 184 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 POLR3KQ9Y2Y1 108 aaPredicted RBP8.72□□□□□ -1.01
TCOF1-204ENST00000427724 SERTM2A0A1B0GWG4 89 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 ZNF503-AS2A6NEH8 195 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 GAGE10A6NGK3 116 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 IFITM10A6NMD0 228 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 ARL14EPLP0DKL9 152 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 ATP5G3P48201 142 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 EFNB3Q15768 340 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 DMDP11532 3685 aa8.72□□□□□ -1.01
TCOF1-204ENST00000427724 J3QR89 54 aa8.71□□□□□ -1.01
TCOF1-204ENST00000427724 HYPMO75409 117 aa8.71□□□□□ -1.01
TCOF1-204ENST00000427724 FAM90A2PQ658T7 463 aa8.71□□□□□ -1.01
TCOF1-204ENST00000427724 Q6ZRM9 215 aa8.71□□□□□ -1.01
TCOF1-204ENST00000427724 PDPNQ86YL7 162 aa8.71□□□□□ -1.01
TCOF1-204ENST00000427724 NPCDR1Q9BY65 106 aa8.71□□□□□ -1.01
TCOF1-204ENST00000427724 TMEM191AQ9H0A3 160 aa8.71□□□□□ -1.01
TCOF1-204ENST00000427724 TMEM242Q9NWH2 141 aa8.71□□□□□ -1.01
TCOF1-204ENST00000427724 PLA2G2EQ9NZK7 142 aa8.71□□□□□ -1.01
TCOF1-204ENST00000427724 ZFP30Q9Y2G7 519 aa8.71□□□□□ -1.01
TCOF1-204ENST00000427724 FOXL2NBQ6ZUU3 175 aa8.71□□□□□ -1.01
TCOF1-204ENST00000427724 STPG3Q8N7X2 389 aa8.71□□□□□ -1.01
TCOF1-204ENST00000427724 PEMTQ9UBM1 199 aa8.71□□□□□ -1.01
TCOF1-204ENST00000427724 SAA2-SAA4A0A096LPE2 208 aa8.71□□□□□ -1.02
TCOF1-204ENST00000427724 IGHV1-69DA0A0B4J2H0 117 aa8.71□□□□□ -1.02
TCOF1-204ENST00000427724 FAM181BA6NEQ2 426 aa8.71□□□□□ -1.02
TCOF1-204ENST00000427724 IGHV1-69P01742 117 aa8.71□□□□□ -1.02
TCOF1-204ENST00000427724 SAA2P0DJI9 122 aaPredicted RBP8.71□□□□□ -1.02
TCOF1-204ENST00000427724 MAST4O15021 2626 aa8.71□□□□□ -1.02
TCOF1-204ENST00000427724 A0A1B0GW64 132 aa8.71□□□□□ -1.02
TCOF1-204ENST00000427724 DNLZQ5SXM8 178 aa8.71□□□□□ -1.02
TCOF1-204ENST00000427724 SRSF12Q8WXF0 261 aaKnown RBP8.71□□□□□ -1.02
TCOF1-204ENST00000427724 TMEM167BQ9NRX6 74 aa8.71□□□□□ -1.02
TCOF1-204ENST00000427724 M0R1W7 72 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 RHOGP84095 191 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 C10orf113Q5VZT2 155 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 NPIPB3Q92617 1050 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 NEU1Q99519 415 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 NRN1Q9NPD7 142 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 C21orf62Q9NYP8 219 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 IGKV1-6A0A0C4DH72 117 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 HOXA3O43365 443 aaPredicted RBP8.7□□□□□ -1.02
TCOF1-204ENST00000427724 NUDT3O95989 172 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 CA2P00918 260 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 IGKV1-5P01602 117 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 MAJINQ3KP22 176 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 FBLN7Q53RD9 439 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 MINOS1Q5TGZ0 78 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 HIGD1AQ9Y241 93 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 MINOS1-NBL1R4GNA1 71 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 SETXQ7Z333 2677 aaKnown RBP8.7□□□□□ -1.02
TCOF1-204ENST00000427724 TRAV41A0A0B4J266 112 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 IL4P05112 153 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 SNRPD3P62318 126 aaKnown RBP8.7□□□□□ -1.02
TCOF1-204ENST00000427724 MORN2Q502X0 79 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 Q6ZR03 302 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 C1orf122Q6ZSJ8 110 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 GTSCR1Q86UQ5 136 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 GAFA1Q96PS6 74 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 DYSFO75923 2080 aa8.7□□□□□ -1.02
TCOF1-204ENST00000427724 VENTXO95231 258 aa8.69□□□□□ -1.02
TCOF1-204ENST00000427724 CGAP01215 116 aa8.69□□□□□ -1.02
TCOF1-204ENST00000427724 OR5AL1P0C617 328 aa8.69□□□□□ -1.02
TCOF1-204ENST00000427724 PMCHL1Q16048 86 aa8.69□□□□□ -1.02
TCOF1-204ENST00000427724 FAM162BQ5T6X4 162 aa8.69□□□□□ -1.02
TCOF1-204ENST00000427724 ASCL4Q6XD76 172 aa8.69□□□□□ -1.02
TCOF1-204ENST00000427724 LHFPL4Q7Z7J7 247 aa8.69□□□□□ -1.02
TCOF1-204ENST00000427724 RPP25LQ8N5L8 163 aaKnown RBP8.69□□□□□ -1.02
TCOF1-204ENST00000427724 NHLRC2Q8NBF2 726 aa8.69□□□□□ -1.02
TCOF1-204ENST00000427724 FOXA2Q9Y261 457 aaPredicted RBP8.69□□□□□ -1.02
TCOF1-204ENST00000427724 IGKV1D-17A0A075B6S4 117 aa8.69□□□□□ -1.02
TCOF1-204ENST00000427724 LINC00869P0C866 280 aa8.69□□□□□ -1.02
TCOF1-204ENST00000427724 COMPP49747 757 aaPredicted RBP8.69□□□□□ -1.02
TCOF1-204ENST00000427724 GCSAMLQ5JQS6 135 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms