RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 IFITM10A6NMD0 228 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 SHISA9B4DS77 424 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 KIAA1644Q3SXP7 199 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 OR10AG1Q8NH19 301 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 RNF114Q9Y508 228 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 USF3Q68DE3 2245 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 TRAV21A0A0B4J279 112 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 EMP1P54849 157 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 CR1LQ2VPA4 569 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 ZNF329Q86UD4 541 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 MIEN1Q9BRT3 115 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 GRIFINA4D1Z8 144 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 IGKV1-16P04430 117 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 LINC00205P59089 165 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 KLHL30-AS1Q8NEE0 82 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 HSPB9Q9BQS6 159 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 BEX4Q9NWD9 120 aaPredicted RBP11.29□□□□□ -0.6
RPL28-202ENST00000426763 GRNP28799 593 aaKnown RBP11.28□□□□□ -0.6
RPL28-202ENST00000426763 PSMG4Q5JS54 123 aa11.28□□□□□ -0.6
RPL28-202ENST00000426763 TP53BP1Q12888 1972 aaPredicted RBP11.28□□□□□ -0.6
RPL28-202ENST00000426763 E9PQ18 207 aa11.28□□□□□ -0.6
RPL28-202ENST00000426763 SLC17A3O00476 420 aa11.28□□□□□ -0.6
RPL28-202ENST00000426763 GCSAMLQ5JQS6 135 aa11.28□□□□□ -0.6
RPL28-202ENST00000426763 PSG8Q9UQ74 426 aa11.28□□□□□ -0.6
RPL28-202ENST00000426763 LHFPL4Q7Z7J7 247 aa11.28□□□□□ -0.6
RPL28-202ENST00000426763 IGKV1-6A0A0C4DH72 117 aa11.28□□□□□ -0.6
RPL28-202ENST00000426763 TMEM262E9PQX1 116 aa11.28□□□□□ -0.6
RPL28-202ENST00000426763 CD7P09564 240 aa11.28□□□□□ -0.6
RPL28-202ENST00000426763 J3QR89 54 aa11.27□□□□□ -0.6
RPL28-202ENST00000426763 PRB1P04280 392 aa11.27□□□□□ -0.6
RPL28-202ENST00000426763 ZNF562Q6V9R5 426 aa11.27□□□□□ -0.6
RPL28-202ENST00000426763 DKK4Q9UBT3 224 aa11.27□□□□□ -0.6
RPL28-202ENST00000426763 MUC21Q5SSG8 566 aa11.27□□□□□ -0.6
RPL28-202ENST00000426763 C1orf147Q96MC9 270 aaPredicted RBP11.27□□□□□ -0.6
RPL28-202ENST00000426763 SLC25A39Q9BZJ4 359 aaPredicted RBP11.27□□□□□ -0.6
RPL28-202ENST00000426763 CRXO43186 299 aaPredicted RBP11.27□□□□□ -0.61
RPL28-202ENST00000426763 CARHSP1Q9Y2V2 147 aaKnown RBP11.27□□□□□ -0.61
RPL28-202ENST00000426763 SOD3P08294 240 aa11.27□□□□□ -0.61
RPL28-202ENST00000426763 DUX4L9Q6RFH8 374 aaPredicted RBP11.27□□□□□ -0.61
RPL28-202ENST00000426763 LCNL1Q6ZST4 164 aa11.27□□□□□ -0.61
RPL28-202ENST00000426763 REC114Q7Z4M0 266 aa11.27□□□□□ -0.61
RPL28-202ENST00000426763 MBD3L1Q8WWY6 194 aa11.27□□□□□ -0.61
RPL28-202ENST00000426763 KLK15Q9H2R5 256 aa11.27□□□□□ -0.61
RPL28-202ENST00000426763 PSMB2P49721 201 aa11.27□□□□□ -0.61
RPL28-202ENST00000426763 RPL15P61313 204 aaKnown RBP11.27□□□□□ -0.61
RPL28-202ENST00000426763 KLF2Q9Y5W3 355 aaPredicted RBP11.27□□□□□ -0.61
RPL28-202ENST00000426763 HTN3P15516 51 aa11.26□□□□□ -0.61
RPL28-202ENST00000426763 NMUP48645 174 aa11.26□□□□□ -0.61
RPL28-202ENST00000426763 C17orf58Q2M2W7 97 aa11.26□□□□□ -0.61
RPL28-202ENST00000426763 KIR3DL3Q8N743 410 aa11.26□□□□□ -0.61
RPL28-202ENST00000426763 REG4Q9BYZ8 158 aa11.26□□□□□ -0.61
RPL28-202ENST00000426763 ZNRD1Q9P1U0 126 aa11.26□□□□□ -0.61
RPL28-202ENST00000426763 TRAV5A0A0B4J249 113 aa11.26□□□□□ -0.61
RPL28-202ENST00000426763 IGLV3-1P01715 115 aa11.26□□□□□ -0.61
RPL28-202ENST00000426763 PRELID3AQ96N28 172 aa11.26□□□□□ -0.61
RPL28-202ENST00000426763 KAAG1Q9UBP8 84 aa11.26□□□□□ -0.61
RPL28-202ENST00000426763 SMIM6P0DI80 62 aa11.26□□□□□ -0.61
RPL28-202ENST00000426763 ZNF833PQ6ZTB9 187 aa11.26□□□□□ -0.61
RPL28-202ENST00000426763 LINC00311Q8N616 119 aa11.26□□□□□ -0.61
RPL28-202ENST00000426763 MGST2Q99735 147 aa11.26□□□□□ -0.61
RPL28-202ENST00000426763 CBLN1P23435 193 aa11.26□□□□□ -0.61
RPL28-202ENST00000426763 TMEM101Q96IK0 257 aa11.26□□□□□ -0.61
RPL28-202ENST00000426763 PEF1Q9UBV8 284 aaKnown RBP11.26□□□□□ -0.61
RPL28-202ENST00000426763 RNASE2P10153 161 aaKnown RBP11.25□□□□□ -0.61
RPL28-202ENST00000426763 TMEM136Q6ZRR5 245 aa11.25□□□□□ -0.61
RPL28-202ENST00000426763 SCRT1Q9BWW7 348 aa11.25□□□□□ -0.61
RPL28-202ENST00000426763 TRAV9-1A0A075B6T8 112 aa11.25□□□□□ -0.61
RPL28-202ENST00000426763 PLA2G5P39877 138 aa11.25□□□□□ -0.61
RPL28-202ENST00000426763 C3orf56Q8N813 242 aa11.25□□□□□ -0.61
RPL28-202ENST00000426763 TRGV11A0A075B6L2 103 aa11.25□□□□□ -0.61
RPL28-202ENST00000426763 MUC21A0A0G2JKD1 596 aa11.25□□□□□ -0.61
RPL28-202ENST00000426763 MUC21A0A140T8X8 626 aa11.25□□□□□ -0.61
RPL28-202ENST00000426763 PMS2P5A8MQ11 134 aa11.25□□□□□ -0.61
RPL28-202ENST00000426763 STAG3L2P0CL84 134 aa11.25□□□□□ -0.61
RPL28-202ENST00000426763 STAG3L3P0CL85 134 aa11.25□□□□□ -0.61
RPL28-202ENST00000426763 VSIRQ9H7M9 311 aa11.25□□□□□ -0.61
RPL28-202ENST00000426763 EP400Q96L91 3159 aa11.25□□□□□ -0.61
RPL28-202ENST00000426763 RNF166Q96A37 237 aaPredicted RBP11.25□□□□□ -0.61
RPL28-202ENST00000426763 GEMIN7Q9H840 131 aaKnown RBP11.25□□□□□ -0.61
RPL28-202ENST00000426763 IGKV3OR2-268A0A0C4DH90 116 aa11.24□□□□□ -0.61
RPL28-202ENST00000426763 CD33P20138 364 aa11.24□□□□□ -0.61
RPL28-202ENST00000426763 PAM16Q9Y3D7 125 aa11.24□□□□□ -0.61
RPL28-202ENST00000426763 FOSL1P15407 271 aa11.24□□□□□ -0.61
RPL28-202ENST00000426763 C9orf139Q6ZV77 190 aa11.24□□□□□ -0.61
RPL28-202ENST00000426763 IZUMO1RA6ND01 250 aa11.24□□□□□ -0.61
RPL28-202ENST00000426763 FAM110DQ8TAY7 271 aaPredicted RBP11.24□□□□□ -0.61
RPL28-202ENST00000426763 ZNF98A6NK75 572 aa11.24□□□□□ -0.61
RPL28-202ENST00000426763 TOMM40O96008 361 aa11.24□□□□□ -0.61
RPL28-202ENST00000426763 RPL23P62829 140 aaKnown RBP11.24□□□□□ -0.61
RPL28-202ENST00000426763 OR5AN1Q8NGI8 311 aa11.24□□□□□ -0.61
RPL28-202ENST00000426763 OBSL1O75147 1896 aa11.24□□□□□ -0.61
RPL28-202ENST00000426763 C15orf62A8K5M9 175 aa11.24□□□□□ -0.61
RPL28-202ENST00000426763 FBLN7Q53RD9 439 aa11.24□□□□□ -0.61
RPL28-202ENST00000426763 A0A0G2JRQ6 117 aa11.23□□□□□ -0.61
RPL28-202ENST00000426763 ATP6V0E1O15342 81 aa11.23□□□□□ -0.61
RPL28-202ENST00000426763 FOXA3P55318 350 aaPredicted RBP11.23□□□□□ -0.61
RPL28-202ENST00000426763 FNDC10F2Z333 226 aa11.23□□□□□ -0.61
RPL28-202ENST00000426763 PMCHL1Q16048 86 aa11.23□□□□□ -0.61
RPL28-202ENST00000426763 ANAPC10Q9UM13 185 aa11.23□□□□□ -0.61
RPL28-202ENST00000426763 PCNX1Q96RV3 2341 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms