RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 SELENOTP62341 195 aa6.51□□□□□ -1.37
TRIM48-201ENST00000417545 CYP2G1PQ6ZSU1 146 aa6.51□□□□□ -1.37
TRIM48-201ENST00000417545 THAP8Q8NA92 274 aa6.51□□□□□ -1.37
TRIM48-201ENST00000417545 OR51G1Q8NGK1 321 aa6.51□□□□□ -1.37
TRIM48-201ENST00000417545 DYNLRB2Q8TF09 96 aa6.51□□□□□ -1.37
TRIM48-201ENST00000417545 TRGV9Q99603 122 aa6.51□□□□□ -1.37
TRIM48-201ENST00000417545 ARPC5LQ9BPX5 153 aa6.51□□□□□ -1.37
TRIM48-201ENST00000417545 ARL6Q9H0F7 186 aa6.51□□□□□ -1.37
TRIM48-201ENST00000417545 PUS1Q9Y606 427 aaKnown RBP eCLIP6.51□□□□□ -1.37
TRIM48-201ENST00000417545 IGHV3OR16-8A0A075B7F1 116 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 RNF222A6NCQ9 220 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 TAAR5O14804 337 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 AGPAT2O15120 278 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 ZNF207O43670 478 aaKnown RBP6.5□□□□□ -1.37
TRIM48-201ENST00000417545 CTSGP08311 255 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 LINC00869P0C866 280 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 YPEL3P61236 119 aaPredicted RBP6.5□□□□□ -1.37
TRIM48-201ENST00000417545 EIF5AP63241 154 aaKnown RBP6.5□□□□□ -1.37
TRIM48-201ENST00000417545 ZNF345Q14585 488 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 Q6ZRG5 221 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 GPHB5Q86YW7 130 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 HSD17B11Q8NBQ5 300 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 DLX4Q92988 240 aaPredicted RBP6.5□□□□□ -1.37
TRIM48-201ENST00000417545 METTL26Q96S19 204 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 ZNF471Q9BX82 626 aaPredicted RBP6.5□□□□□ -1.37
TRIM48-201ENST00000417545 RABAC1Q9UI14 185 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 WDR83OSQ9Y284 106 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 F8W735 103 aaPredicted RBP6.5□□□□□ -1.37
TRIM48-201ENST00000417545 G3V3Q6 166 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 COX7A2P2O60397 106 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 SAP30O75446 220 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 JTBO76095 146 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 OR5G3P0C626 314 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 PSG1P11464 419 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 ORM2P19652 201 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 NPPCP23582 126 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 ADMP35318 185 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 ZNF90Q03938 601 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 FHL3Q13643 280 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 VWC2Q2TAL6 325 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 OXLD1Q5BKU9 147 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 REC114Q7Z4M0 266 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 KCNRGQ8N5I3 272 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 OR1B1Q8NGR6 318 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 TMEM190Q8WZ59 177 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 RNF125Q96EQ8 232 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 GRAMD2BQ96HH9 432 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 MCRIP2Q9BUT9 160 aaKnown RBP6.5□□□□□ -1.37
TRIM48-201ENST00000417545 GPR61Q9BZJ8 451 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 WDR61Q9GZS3 305 aaKnown RBP6.5□□□□□ -1.37
TRIM48-201ENST00000417545 TMEM231Q9H6L2 316 aa6.5□□□□□ -1.37
TRIM48-201ENST00000417545 DAZ1Q9NQZ3 744 aaKnown RBP6.5□□□□□ -1.37
TRIM48-201ENST00000417545 FBN1P35555 2871 aaKnown RBP6.49□□□□□ -1.37
TRIM48-201ENST00000417545 A0A1W2PS18 150 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 SEC14L6B5MCN3 397 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 LGALS9O00182 355 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 BCL2L11O43521 198 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 IGKV1-17P01599 117 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 HNRNPCP07910 306 aaKnown RBP eCLIP6.49□□□□□ -1.37
TRIM48-201ENST00000417545 ELLP55199 621 aaPredicted RBP6.49□□□□□ -1.37
TRIM48-201ENST00000417545 B2MP61769 119 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 CD300CQ08708 224 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 KLF5Q13887 457 aaPredicted RBP6.49□□□□□ -1.37
TRIM48-201ENST00000417545 TOMM20LQ6UXN7 152 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 TMUB2Q71RG4 321 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 LINC00482Q8N8I6 264 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 OR11H4Q8NGC9 324 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 OR9G4Q8NGQ1 327 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 OR1L4Q8NGR5 311 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 GNPNAT1Q96EK6 184 aaPredicted RBP6.49□□□□□ -1.37
TRIM48-201ENST00000417545 RCC1LQ96I51 464 aaKnown RBP6.49□□□□□ -1.37
TRIM48-201ENST00000417545 PFDN5Q99471 154 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 MGST2Q99735 147 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 NEURL2Q9BR09 285 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 GGTLC1Q9BX51 225 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 NPCDR1Q9BY65 106 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 DOK5Q9P104 306 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 HIGD1AQ9Y241 93 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 PXMP4Q9Y6I8 212 aa6.49□□□□□ -1.37
TRIM48-201ENST00000417545 ATRQ13535 2644 aa6.48□□□□□ -1.37
TRIM48-201ENST00000417545 IGKV1D-37A0A075B6S9 117 aa6.48□□□□□ -1.37
TRIM48-201ENST00000417545 IGKV1OR2-108A0A075B7D4 117 aa6.48□□□□□ -1.37
TRIM48-201ENST00000417545 HYPMO75409 117 aa6.48□□□□□ -1.37
TRIM48-201ENST00000417545 TPT1P13693 172 aaKnown RBP6.48□□□□□ -1.37
TRIM48-201ENST00000417545 GATA2P23769 480 aaPredicted RBP6.48□□□□□ -1.37
TRIM48-201ENST00000417545 OPCMLQ14982 345 aa6.48□□□□□ -1.37
TRIM48-201ENST00000417545 FFAR4Q5NUL3 377 aa6.48□□□□□ -1.37
TRIM48-201ENST00000417545 PRR31Q5SQ13 230 aa6.48□□□□□ -1.37
TRIM48-201ENST00000417545 C9orf66Q5T8R8 295 aa6.48□□□□□ -1.37
TRIM48-201ENST00000417545 PXDC1Q5TGL8 231 aa6.48□□□□□ -1.37
TRIM48-201ENST00000417545 MIC13Q5XKP0 118 aa6.48□□□□□ -1.37
TRIM48-201ENST00000417545 RPL7L1Q6DKI1 246 aaKnown RBP6.48□□□□□ -1.37
TRIM48-201ENST00000417545 UNQ9165/PRO28630Q6UXU0 137 aa6.48□□□□□ -1.37
TRIM48-201ENST00000417545 STPG3Q8N7X2 389 aa6.48□□□□□ -1.37
TRIM48-201ENST00000417545 MARC2Q969Z3 335 aa6.48□□□□□ -1.37
TRIM48-201ENST00000417545 RSG1Q9BU20 258 aa6.48□□□□□ -1.37
TRIM48-201ENST00000417545 PARD6GQ9BYG4 376 aaPredicted RBP6.48□□□□□ -1.37
TRIM48-201ENST00000417545 RNF24Q9Y225 148 aa6.48□□□□□ -1.37
TRIM48-201ENST00000417545 IGHV3-49A0A0A0MS15 119 aa6.47□□□□□ -1.37
TRIM48-201ENST00000417545 C2orf70A6NJV1 201 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms