RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 ZNF430Q9H8G1 570 aaPredicted RBP3.18□□□□□ -1.9
PTPRK-210ENST00000415055 DAZ1Q9NQZ3 744 aaKnown RBP3.18□□□□□ -1.9
PTPRK-210ENST00000415055 CLEC5AQ9NY25 188 aa3.18□□□□□ -1.9
PTPRK-210ENST00000415055 CKLFQ9UBR5 152 aa3.18□□□□□ -1.9
PTPRK-210ENST00000415055 TBC1D24Q9ULP9 559 aa3.18□□□□□ -1.9
PTPRK-210ENST00000415055 RBM7Q9Y580 266 aaKnown RBP3.18□□□□□ -1.9
PTPRK-210ENST00000415055 DNAH5Q8TE73 4624 aa3.18□□□□□ -1.9
PTPRK-210ENST00000415055 IGHV3OR16-13A0A075B7E8 117 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 IGHV3-74A0A0B4J1X5 117 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 OR2T8A6NH00 312 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 H7C423 109 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 SC5DO75845 299 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 TMEM50AO95807 157 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 SMR3BP02814 79 aaPredicted RBP3.17□□□□□ -1.9
PTPRK-210ENST00000415055 RPL27AP46776 148 aaKnown RBP3.17□□□□□ -1.9
PTPRK-210ENST00000415055 PSMD7P51665 324 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 DEFB131AP59861 70 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 UBE2KP61086 200 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 HLA-DRB3P79483 266 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 MS4A2Q01362 244 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 TPBGQ13641 420 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 C2orf66Q6UXQ4 117 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 MOB1BQ7L9L4 216 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 C6orf201Q7Z4U5 140 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 SPATA24Q86W54 205 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 UBAC2Q8NBM4 344 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 CANT1Q8WVQ1 401 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 OR2A7Q96R45 310 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 RNF2Q99496 336 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 AGMATQ9BSE5 352 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 GEMIN7Q9H840 131 aaKnown RBP3.17□□□□□ -1.9
PTPRK-210ENST00000415055 TMEM14BQ9NUH8 114 aa3.17□□□□□ -1.9
PTPRK-210ENST00000415055 IGHV3-21A0A0B4J1V1 117 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 NBDYA0A0U1RRE5 68 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 ITGB1BP1O14713 200 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 BET1O15155 118 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 TGOLN2O43493 480 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 YIF1AO95070 293 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 EIF4EP06730 217 aaKnown RBP3.16□□□□□ -1.9
PTPRK-210ENST00000415055 SAA1P0DJI8 122 aaPredicted RBP3.16□□□□□ -1.9
PTPRK-210ENST00000415055 GATA1P15976 413 aaPredicted RBP3.16□□□□□ -1.9
PTPRK-210ENST00000415055 HIST1H1BP16401 226 aaKnown RBP3.16□□□□□ -1.9
PTPRK-210ENST00000415055 CRHBPP24387 322 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 PSMB6P28072 239 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 FUSP35637 526 aaKnown RBP eCLIP3.16□□□□□ -1.9
PTPRK-210ENST00000415055 GTF2A1P52655 376 aaPredicted RBP3.16□□□□□ -1.9
PTPRK-210ENST00000415055 OXA1LQ15070 435 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 CDK10Q15131 360 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 ATP6AP1Q15904 470 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 OR2B11Q5JQS5 317 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 OR2G6Q5TZ20 316 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 VKORC1L1Q8N0U8 176 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 LYPD1Q8N2G4 141 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 CCDC71LQ8N9Z2 235 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 C15orf53Q8NAA6 179 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.16□□□□□ -1.9
PTPRK-210ENST00000415055 UFD1Q92890 307 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 HDHD3Q9BSH5 251 aaPredicted RBP3.16□□□□□ -1.9
PTPRK-210ENST00000415055 RHPN1-AS1Q9BWJ2 59 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 YTHDF1Q9BYJ9 559 aaKnown RBP3.16□□□□□ -1.9
PTPRK-210ENST00000415055 ZNF436Q9C0F3 470 aaPredicted RBP3.16□□□□□ -1.9
PTPRK-210ENST00000415055 SLC2A9Q9NRM0 540 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 PLEKHJ1Q9NW61 149 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 SDHAF2Q9NX18 166 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 RABAC1Q9UI14 185 aa3.16□□□□□ -1.9
PTPRK-210ENST00000415055 TRAV8-7A0A075B6U6 113 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 KNCNA6PVL3 124 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 KRTAP9-6A8MVA2 160 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 ZNF705EA8MWA4 302 aaPredicted RBP3.15□□□□□ -1.91
PTPRK-210ENST00000415055 E7EUB6 86 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 G3V2T6 193 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 J3QRK9 145 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 FKBP6O75344 327 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 CD3GP09693 182 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 SPART-AS1P0CW21 52 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 POLR2IP36954 125 aaKnown RBP3.15□□□□□ -1.91
PTPRK-210ENST00000415055 LEPP41159 167 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 PRR4Q16378 134 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 Q56UQ5 140 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 OR10K2Q6IF99 312 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 UFSP1Q6NVU6 142 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 TCF24Q7RTU0 167 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 Q8N377 158 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 ZNF502Q8TBZ5 544 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 PTX4Q96A99 478 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 NRBF2Q96F24 287 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 ADTRPQ96IZ2 230 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 FAM210BQ96KR6 192 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 OR51E2Q9H255 320 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 SMPXQ9UHP9 88 aa3.15□□□□□ -1.91
PTPRK-210ENST00000415055 IGLV11-55A0A075B6I3 123 aa3.14□□□□□ -1.91
PTPRK-210ENST00000415055 IGHV3-66A0A0C4DH42 116 aa3.14□□□□□ -1.91
PTPRK-210ENST00000415055 IGHV7-4-1A0A0J9YVY3 117 aa3.14□□□□□ -1.91
PTPRK-210ENST00000415055 NDUFA4O00483 81 aa3.14□□□□□ -1.91
PTPRK-210ENST00000415055 NUPL2O15504 423 aaKnown RBP3.14□□□□□ -1.91
PTPRK-210ENST00000415055 CYB5BO43169 146 aa3.14□□□□□ -1.91
PTPRK-210ENST00000415055 DCTN3O75935 186 aa3.14□□□□□ -1.91
PTPRK-210ENST00000415055 NAPSAO96009 420 aa3.14□□□□□ -1.91
PTPRK-210ENST00000415055 IFNA5P01569 189 aa3.14□□□□□ -1.91
PTPRK-210ENST00000415055 GIG44P09565 113 aaPredicted RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms