RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TCF24Q7RTU0 167 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 C6orf201Q7Z4U5 140 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 DEFB128Q7Z7B8 93 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 ZNF525Q8N782 197 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR10G6Q8NH81 332 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 MRPL30Q8TCC3 161 aaKnown RBP2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 SLC37A2Q8TED4 501 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 TMEM54Q969K7 222 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 SLC35E1Q96K37 410 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 CIB3Q96Q77 187 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 TP53RKQ96S44 253 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 OR2J1Q9GZK6 312 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 WDR61Q9GZS3 305 aaKnown RBP2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 PARP12Q9H0J9 701 aaKnown RBP2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 PLEKHA3Q9HB20 300 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 FAM60AQ9NP50 221 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 TMEM9BQ9NQ34 198 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 KCNIP2Q9NS61 270 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 RPRMQ9NS64 109 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 UQCR10Q9UDW1 63 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 PSG8Q9UQ74 426 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 FUT9Q9Y231 359 aa2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 SNRNP200O75643 2136 aaKnown RBP2.78□□□□□ -1.96
HMGB3P23-201ENST00000414981 TMEM131Q92545 1883 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 MPDZO75970 2070 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGLV3-12A0A075B6K2 115 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGKV1D-8A0A087WSZ0 117 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 IGKV1D-43A0A0B4J1Z2 117 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 SPTY2D1-AS1A0A0U1RR47 76 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF816-ZNF321PA0A0X1KG74 233 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZFP92A6NM28 416 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 CEBPZOSA8MTT3 80 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 H3BSH0 61 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 M0R135 149 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 SSSCA1O60232 199 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 GYPAP02724 150 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 CRYGDP07320 174 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 SNRPCP09234 159 aaKnown RBP2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 MMP7P09237 267 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 SELEP16581 610 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 CRYGSP22914 178 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 PTGDSP41222 190 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 REG1BP48304 166 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 NDUFV3P56181 108 aaKnown RBP2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 GNB2P62879 340 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 DEFB103AP81534 67 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 RUNX1Q01196 453 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 EDDM3AQ14507 147 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 NSDHLQ15738 373 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 ADIRFQ15847 76 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 NNATQ16517 81 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 PRSS8Q16651 343 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 PLPPR5Q32ZL2 321 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 SP6Q3SY56 376 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 TPTE2P1Q5T6R2 138 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 PVRIGQ6DKI7 326 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF880Q6PDB4 577 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 WDR82Q6UXN9 313 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 TMEM14EPQ6UXP3 125 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 C12orf54Q6X4T0 127 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 Q6ZVH6 145 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 Q6ZVQ6 151 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 LINC01551Q86U37 167 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 C17orf82Q86X59 251 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 C11orf53Q8IXP5 236 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 C1orf174Q8IYL3 243 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 SUMF1Q8NBK3 374 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 CMTM2Q8TAZ6 248 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 DNAJA3Q96EY1 480 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 BORCS8Q96FH0 119 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF799Q96GE5 643 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 RCHY1Q96PM5 261 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 FAM173AQ9BQD7 235 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 FAAP24Q9BTP7 215 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 VAMP8Q9BV40 100 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 TMEM147Q9BVK8 224 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 GNB1LQ9BYB4 327 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 HES7Q9BYE0 225 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 OCR1Q9BZK8 76 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 LIME1Q9H400 295 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF586Q9NXT0 402 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 IDI2-AS1Q9NZ38 188 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 MRPL27Q9P0M9 148 aaKnown RBP2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 TAAR3PQ9P1P4 343 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR1A1Q9P1Q5 309 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 JPT1Q9UK76 154 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 TRAPPC1Q9Y5R8 145 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 YLPM1P49750 1951 aaKnown RBP2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 FREM3P0C091 2139 aa2.77□□□□□ -1.97
HMGB3P23-201ENST00000414981 TRAV30A0A087WSZ9 112 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 ZNF705FA8MVS1 300 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 C9JCJ5 164 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 FNDC10F2Z333 226 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 SMKR1H3BMG3 65 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 M0R1B8 84 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 RER1O15258 196 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 PGLYRP1O75594 196 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 CST7O76096 145 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR4A8P0C604 315 aa2.76□□□□□ -1.97
HMGB3P23-201ENST00000414981 OR5G3P0C626 314 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms