RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 VWC2Q2TAL6 325 aa23.19■■□□□ 1.3
CSNK1E-206ENST00000413574 LSM4Q9Y4Z0 139 aaKnown RBP23.19■■□□□ 1.3
CSNK1E-206ENST00000413574 K7EMT4 169 aa23.18■■□□□ 1.3
CSNK1E-206ENST00000413574 SMIM3Q9BZL3 60 aa23.18■■□□□ 1.3
CSNK1E-206ENST00000413574 SIGLEC8Q9NYZ4 499 aa23.18■■□□□ 1.3
CSNK1E-206ENST00000413574 DNAH3Q8TD57 4116 aa23.18■■□□□ 1.3
CSNK1E-206ENST00000413574 IGHV3OR16-13A0A075B7E8 117 aa23.17■■□□□ 1.3
CSNK1E-206ENST00000413574 IGHV3-74A0A0B4J1X5 117 aa23.17■■□□□ 1.3
CSNK1E-206ENST00000413574 INSL3P51460 131 aa23.17■■□□□ 1.3
CSNK1E-206ENST00000413574 USF2Q15853 346 aaPredicted RBP23.17■■□□□ 1.3
CSNK1E-206ENST00000413574 ATP6V1FQ16864 119 aa23.17■■□□□ 1.3
CSNK1E-206ENST00000413574 OR51G1Q8NGK1 321 aa23.17■■□□□ 1.3
CSNK1E-206ENST00000413574 GINS3Q9BRX5 216 aa23.17■■□□□ 1.3
CSNK1E-206ENST00000413574 MLXQ9UH92 298 aa23.17■■□□□ 1.3
CSNK1E-206ENST00000413574 APOHP02749 345 aaPredicted RBP23.16■■□□□ 1.3
CSNK1E-206ENST00000413574 C8orf88P0DMB2 117 aa23.16■■□□□ 1.3
CSNK1E-206ENST00000413574 CYP2G1PQ6ZSU1 146 aa23.16■■□□□ 1.3
CSNK1E-206ENST00000413574 MRPL27Q9P0M9 148 aaKnown RBP23.16■■□□□ 1.3
CSNK1E-206ENST00000413574 WIPF1O43516 503 aa23.15■■□□□ 1.3
CSNK1E-206ENST00000413574 ZNF546Q86UE3 836 aa23.15■■□□□ 1.3
CSNK1E-206ENST00000413574 ST6GAL2Q96JF0 529 aa23.15■■□□□ 1.3
CSNK1E-206ENST00000413574 MGST2Q99735 147 aa23.15■■□□□ 1.3
CSNK1E-206ENST00000413574 GPR61Q9BZJ8 451 aa23.15■■□□□ 1.3
CSNK1E-206ENST00000413574 WDR83OSQ9Y284 106 aa23.15■■□□□ 1.3
CSNK1E-206ENST00000413574 WI2-2373I1.2A0A1W2PRP0 233 aa23.15■■□□□ 1.3
CSNK1E-206ENST00000413574 IGLV1-51P01701 117 aa23.15■■□□□ 1.3
CSNK1E-206ENST00000413574 FABP1P07148 127 aa23.15■■□□□ 1.3
CSNK1E-206ENST00000413574 DYNLRB2Q8TF09 96 aa23.15■■□□□ 1.3
CSNK1E-206ENST00000413574 RNF125Q96EQ8 232 aa23.15■■□□□ 1.3
CSNK1E-206ENST00000413574 PBDC1Q9BVG4 233 aa23.15■■□□□ 1.3
CSNK1E-206ENST00000413574 IGHV3-66A0A0C4DH42 116 aa23.14■■□□□ 1.29
CSNK1E-206ENST00000413574 IGHV7-4-1A0A0J9YVY3 117 aa23.14■■□□□ 1.29
CSNK1E-206ENST00000413574 AGPAT2O15120 278 aa23.14■■□□□ 1.29
CSNK1E-206ENST00000413574 BTNL8Q6UX41 500 aa23.14■■□□□ 1.29
CSNK1E-206ENST00000413574 MARC2Q969Z3 335 aa23.14■■□□□ 1.29
CSNK1E-206ENST00000413574 AQP10Q96PS8 301 aa23.14■■□□□ 1.29
CSNK1E-206ENST00000413574 SMPXQ9UHP9 88 aa23.14■■□□□ 1.29
CSNK1E-206ENST00000413574 KRTAP10-11P60412 298 aa23.13■■□□□ 1.29
CSNK1E-206ENST00000413574 LYZP61626 148 aa23.13■■□□□ 1.29
CSNK1E-206ENST00000413574 BEAN1Q3B7T3 259 aa23.13■■□□□ 1.29
CSNK1E-206ENST00000413574 TNFSF18Q9UNG2 199 aa23.13■■□□□ 1.29
CSNK1E-206ENST00000413574 DEFB114Q30KQ6 69 aa23.12■■□□□ 1.29
CSNK1E-206ENST00000413574 METTL26Q96S19 204 aa23.12■■□□□ 1.29
CSNK1E-206ENST00000413574 WFDC1Q9HC57 220 aa23.12■■□□□ 1.29
CSNK1E-206ENST00000413574 IZUMO1RA6ND01 250 aa23.11■■□□□ 1.29
CSNK1E-206ENST00000413574 NPPCP23582 126 aa23.11■■□□□ 1.29
CSNK1E-206ENST00000413574 NUP62P37198 522 aaPredicted RBP23.11■■□□□ 1.29
CSNK1E-206ENST00000413574 CD300EQ496F6 205 aaPredicted RBP23.11■■□□□ 1.29
CSNK1E-206ENST00000413574 BPIFCQ8NFQ6 507 aa23.11■■□□□ 1.29
CSNK1E-206ENST00000413574 RHPN1-AS1Q9BWJ2 59 aa23.11■■□□□ 1.29
CSNK1E-206ENST00000413574 RNF222A6NCQ9 220 aa23.11■■□□□ 1.29
CSNK1E-206ENST00000413574 FGF7P21781 194 aa23.11■■□□□ 1.29
CSNK1E-206ENST00000413574 INO80EQ8NBZ0 244 aaPredicted RBP23.11■■□□□ 1.29
CSNK1E-206ENST00000413574 OR11H4Q8NGC9 324 aa23.11■■□□□ 1.29
CSNK1E-206ENST00000413574 ST8SIA2Q92186 375 aa23.11■■□□□ 1.29
CSNK1E-206ENST00000413574 ATP5SQ99766 215 aa23.11■■□□□ 1.29
CSNK1E-206ENST00000413574 SLC45A2Q9UMX9 530 aa23.11■■□□□ 1.29
CSNK1E-206ENST00000413574 CHEK1O14757 476 aa23.1■■□□□ 1.29
CSNK1E-206ENST00000413574 CRYBB3P26998 211 aa23.1■■□□□ 1.29
CSNK1E-206ENST00000413574 CAMLGP49069 296 aa23.1■■□□□ 1.29
CSNK1E-206ENST00000413574 AP2S1P53680 142 aaPredicted RBP23.1■■□□□ 1.29
CSNK1E-206ENST00000413574 FBXL17Q9UF56 701 aa23.1■■□□□ 1.29
CSNK1E-206ENST00000413574 ARPC5O15511 151 aa23.09■■□□□ 1.29
CSNK1E-206ENST00000413574 EGFEM1PQ0D2K5 195 aa23.09■■□□□ 1.29
CSNK1E-206ENST00000413574 GGTLC1Q9BX51 225 aa23.09■■□□□ 1.29
CSNK1E-206ENST00000413574 RABAC1Q9UI14 185 aa23.09■■□□□ 1.29
CSNK1E-206ENST00000413574 LINC00869P0C866 280 aa23.08■■□□□ 1.29
CSNK1E-206ENST00000413574 ORM2P19652 201 aa23.08■■□□□ 1.29
CSNK1E-206ENST00000413574 SELENOTP62341 195 aa23.08■■□□□ 1.29
CSNK1E-206ENST00000413574 RNF2Q99496 336 aa23.08■■□□□ 1.29
CSNK1E-206ENST00000413574 TECRQ9NZ01 308 aaKnown RBP23.08■■□□□ 1.29
CSNK1E-206ENST00000413574 HNRNPCP07910 306 aaKnown RBP eCLIP23.08■■□□□ 1.28
CSNK1E-206ENST00000413574 KPRPQ5T749 579 aaPredicted RBP23.08■■□□□ 1.28
CSNK1E-206ENST00000413574 STPG3Q8N7X2 389 aa23.08■■□□□ 1.28
CSNK1E-206ENST00000413574 DOK5Q9P104 306 aa23.08■■□□□ 1.28
CSNK1E-206ENST00000413574 SORL1Q92673 2214 aa23.07■■□□□ 1.28
CSNK1E-206ENST00000413574 PRB2P02812 416 aaPredicted RBP23.07■■□□□ 1.28
CSNK1E-206ENST00000413574 RAB31Q13636 194 aa23.07■■□□□ 1.28
CSNK1E-206ENST00000413574 MIC13Q5XKP0 118 aa23.07■■□□□ 1.28
CSNK1E-206ENST00000413574 OR1B1Q8NGR6 318 aa23.07■■□□□ 1.28
CSNK1E-206ENST00000413574 WDR61Q9GZS3 305 aaKnown RBP23.07■■□□□ 1.28
CSNK1E-206ENST00000413574 VSIRQ9H7M9 311 aa23.07■■□□□ 1.28
CSNK1E-206ENST00000413574 U3KQE9 123 aa23.07■■□□□ 1.28
CSNK1E-206ENST00000413574 DFFBO76075 338 aa23.06■■□□□ 1.28
CSNK1E-206ENST00000413574 CD300CQ08708 224 aa23.06■■□□□ 1.28
CSNK1E-206ENST00000413574 AKAP14Q86UN6 197 aa23.06■■□□□ 1.28
CSNK1E-206ENST00000413574 TMEM61Q8N0U2 210 aa23.06■■□□□ 1.28
CSNK1E-206ENST00000413574 NPCDR1Q9BY65 106 aa23.06■■□□□ 1.28
CSNK1E-206ENST00000413574 CFDP00746 253 aaPredicted RBP23.05■■□□□ 1.28
CSNK1E-206ENST00000413574 EIF2B2P49770 351 aaKnown RBP23.04■■□□□ 1.28
CSNK1E-206ENST00000413574 TCTE3Q8IZS6 198 aa23.04■■□□□ 1.28
CSNK1E-206ENST00000413574 ARL6Q9H0F7 186 aa23.04■■□□□ 1.28
CSNK1E-206ENST00000413574 MPDU1O75352 247 aa23.04■■□□□ 1.28
CSNK1E-206ENST00000413574 OPCMLQ14982 345 aa23.04■■□□□ 1.28
CSNK1E-206ENST00000413574 PRR20EP86478 221 aa23.03■■□□□ 1.28
CSNK1E-206ENST00000413574 PRR20CP86479 221 aa23.03■■□□□ 1.28
CSNK1E-206ENST00000413574 PRR20DP86480 221 aa23.03■■□□□ 1.28
CSNK1E-206ENST00000413574 PRR20BP86481 221 aa23.03■■□□□ 1.28
CSNK1E-206ENST00000413574 PRR20AP86496 221 aa23.03■■□□□ 1.28
CSNK1E-206ENST00000413574 MFFQ9GZY8 342 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms