RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 BUB3O43684 328 aa14.07□□□□□ -0.16
SMARCB1-204ENST00000407422 EIF2B2P49770 351 aaKnown RBP14.07□□□□□ -0.16
SMARCB1-204ENST00000407422 ZNF90Q03938 601 aa14.07□□□□□ -0.16
SMARCB1-204ENST00000407422 ACTL10Q5JWF8 245 aa14.07□□□□□ -0.16
SMARCB1-204ENST00000407422 SRRQ9GZT4 340 aa14.07□□□□□ -0.16
SMARCB1-204ENST00000407422 SFT2D2O95562 160 aa14.06□□□□□ -0.16
SMARCB1-204ENST00000407422 GPX4P36969 197 aaPredicted RBP14.06□□□□□ -0.16
SMARCB1-204ENST00000407422 AP2S1P53680 142 aaPredicted RBP14.06□□□□□ -0.16
SMARCB1-204ENST00000407422 PSMG4Q5JS54 123 aa14.06□□□□□ -0.16
SMARCB1-204ENST00000407422 PHLDA1Q8WV24 401 aaPredicted RBP14.06□□□□□ -0.16
SMARCB1-204ENST00000407422 DEDD2Q8WXF8 326 aa14.06□□□□□ -0.16
SMARCB1-204ENST00000407422 BIRC6Q9NR09 4857 aa14.06□□□□□ -0.16
SMARCB1-204ENST00000407422 PIGBOS1A0A0B4J2F0 54 aa14.05□□□□□ -0.16
SMARCB1-204ENST00000407422 ZFP92A6NM28 416 aa14.05□□□□□ -0.16
SMARCB1-204ENST00000407422 C4BPBP20851 252 aa14.05□□□□□ -0.16
SMARCB1-204ENST00000407422 ATP5IP56385 69 aaPredicted RBP14.05□□□□□ -0.16
SMARCB1-204ENST00000407422 NANOS2P60321 138 aaKnown RBP14.05□□□□□ -0.16
SMARCB1-204ENST00000407422 SPANXN2Q5MJ10 180 aa14.05□□□□□ -0.16
SMARCB1-204ENST00000407422 CENPSQ8N2Z9 138 aa14.05□□□□□ -0.16
SMARCB1-204ENST00000407422 RNF125Q96EQ8 232 aa14.05□□□□□ -0.16
SMARCB1-204ENST00000407422 PBDC1Q9BVG4 233 aa14.05□□□□□ -0.16
SMARCB1-204ENST00000407422 C11orf68Q9H3H3 251 aaKnown RBP14.05□□□□□ -0.16
SMARCB1-204ENST00000407422 LY6G6CO95867 125 aa14.04□□□□□ -0.16
SMARCB1-204ENST00000407422 HOXB5P09067 269 aa14.04□□□□□ -0.16
SMARCB1-204ENST00000407422 SLC25A6P12236 298 aa14.04□□□□□ -0.16
SMARCB1-204ENST00000407422 BAK1Q16611 211 aa14.04□□□□□ -0.16
SMARCB1-204ENST00000407422 SIGLEC15Q6ZMC9 328 aa14.04□□□□□ -0.16
SMARCB1-204ENST00000407422 SLC35E1Q96K37 410 aa14.04□□□□□ -0.16
SMARCB1-204ENST00000407422 RAB40CQ96S21 281 aa14.04□□□□□ -0.16
SMARCB1-204ENST00000407422 MAGT1Q9H0U3 335 aa14.04□□□□□ -0.16
SMARCB1-204ENST00000407422 PAIP2BQ9ULR5 123 aaKnown RBP14.04□□□□□ -0.16
SMARCB1-204ENST00000407422 TMED3Q9Y3Q3 217 aa14.04□□□□□ -0.16
SMARCB1-204ENST00000407422 FRAS1Q86XX4 4008 aa14.04□□□□□ -0.16
SMARCB1-204ENST00000407422 FAM90A26D6RGX4 464 aa14.04□□□□□ -0.16
SMARCB1-204ENST00000407422 ZNF701M0R085 212 aaPredicted RBP14.04□□□□□ -0.16
SMARCB1-204ENST00000407422 C11orf45Q8TAV5 145 aa14.04□□□□□ -0.16
SMARCB1-204ENST00000407422 NRN1Q9NPD7 142 aa14.04□□□□□ -0.16
SMARCB1-204ENST00000407422 KLK5Q9Y337 293 aaPredicted RBP14.04□□□□□ -0.16
SMARCB1-204ENST00000407422 IGKV1OR2-108A0A075B7D4 117 aa14.02□□□□□ -0.16
SMARCB1-204ENST00000407422 SPP1P10451 314 aa14.02□□□□□ -0.16
SMARCB1-204ENST00000407422 RAB11AP62491 216 aa14.02□□□□□ -0.16
SMARCB1-204ENST00000407422 GGNBP1Q5YKI7 109 aa14.02□□□□□ -0.16
SMARCB1-204ENST00000407422 MORN3Q6PF18 240 aaPredicted RBP14.02□□□□□ -0.16
SMARCB1-204ENST00000407422 Q8NAQ8 132 aa14.02□□□□□ -0.16
SMARCB1-204ENST00000407422 CLEC5AQ9NY25 188 aa14.02□□□□□ -0.16
SMARCB1-204ENST00000407422 FBXL17Q9UF56 701 aa14.02□□□□□ -0.16
SMARCB1-204ENST00000407422 WRBO00258 174 aa14.01□□□□□ -0.17
SMARCB1-204ENST00000407422 MED6O75586 246 aa14.01□□□□□ -0.17
SMARCB1-204ENST00000407422 OR2F1Q13607 317 aa14.01□□□□□ -0.17
SMARCB1-204ENST00000407422 FLVCR2Q9UPI3 526 aa14.01□□□□□ -0.17
SMARCB1-204ENST00000407422 LINC00854A0A1B0GVQ3 168 aa14.01□□□□□ -0.17
SMARCB1-204ENST00000407422 SYNGR2O43760 224 aa14.01□□□□□ -0.17
SMARCB1-204ENST00000407422 LYZP61626 148 aa14.01□□□□□ -0.17
SMARCB1-204ENST00000407422 SNRPD3P62318 126 aaKnown RBP14.01□□□□□ -0.17
SMARCB1-204ENST00000407422 GSG1LQ6UXU4 331 aa14.01□□□□□ -0.17
SMARCB1-204ENST00000407422 SDHCQ99643 169 aaPredicted RBP14.01□□□□□ -0.17
SMARCB1-204ENST00000407422 C9orf170A2RU37 121 aa14□□□□□ -0.17
SMARCB1-204ENST00000407422 PRSS46E5RG02 174 aa14□□□□□ -0.17
SMARCB1-204ENST00000407422 ADAP1O75689 374 aa14□□□□□ -0.17
SMARCB1-204ENST00000407422 RBMY1A1P0DJD3 496 aaKnown RBP14□□□□□ -0.17
SMARCB1-204ENST00000407422 RBMY1CP0DJD4 496 aa14□□□□□ -0.17
SMARCB1-204ENST00000407422 INPP1P49441 399 aa14□□□□□ -0.17
SMARCB1-204ENST00000407422 RBMY1FQ15415 496 aaKnown RBP14□□□□□ -0.17
SMARCB1-204ENST00000407422 TMEM41BQ5BJD5 291 aa14□□□□□ -0.17
SMARCB1-204ENST00000407422 TRIQKQ629K1 86 aa14□□□□□ -0.17
SMARCB1-204ENST00000407422 OR8G2PQ6IF36 304 aa14□□□□□ -0.17
SMARCB1-204ENST00000407422 CSNK1G2-AS1Q8NCQ2 148 aa14□□□□□ -0.17
SMARCB1-204ENST00000407422 TRGV9Q99603 122 aa14□□□□□ -0.17
SMARCB1-204ENST00000407422 WDR12Q9GZL7 423 aaKnown RBP14□□□□□ -0.17
SMARCB1-204ENST00000407422 VPS13DQ5THJ4 4388 aa14□□□□□ -0.17
SMARCB1-204ENST00000407422 IGHV4-28A0A0C4DH34 117 aa13.99□□□□□ -0.17
SMARCB1-204ENST00000407422 SNRPGP15A8MWD9 76 aa13.99□□□□□ -0.17
SMARCB1-204ENST00000407422 NDUFB6O95139 128 aa13.99□□□□□ -0.17
SMARCB1-204ENST00000407422 UBE2MP61081 183 aaKnown RBP13.99□□□□□ -0.17
SMARCB1-204ENST00000407422 THAP8Q8NA92 274 aa13.99□□□□□ -0.17
SMARCB1-204ENST00000407422 CIB3Q96Q77 187 aaPredicted RBP13.99□□□□□ -0.17
SMARCB1-204ENST00000407422 MFFQ9GZY8 342 aa13.99□□□□□ -0.17
SMARCB1-204ENST00000407422 SEPSECSQ9HD40 501 aaKnown RBP13.99□□□□□ -0.17
SMARCB1-204ENST00000407422 X6R8D5 127 aa13.99□□□□□ -0.17
SMARCB1-204ENST00000407422 ZNF705EA8MWA4 302 aaPredicted RBP13.98□□□□□ -0.17
SMARCB1-204ENST00000407422 H3BP45 60 aa13.98□□□□□ -0.17
SMARCB1-204ENST00000407422 DEFB1P60022 68 aa13.98□□□□□ -0.17
SMARCB1-204ENST00000407422 SPANXN5Q5MJ07 72 aa13.98□□□□□ -0.17
SMARCB1-204ENST00000407422 NAP1L6A6NFF2 107 aa13.97□□□□□ -0.17
SMARCB1-204ENST00000407422 H3BMM0 161 aa13.97□□□□□ -0.17
SMARCB1-204ENST00000407422 FABP1P07148 127 aa13.97□□□□□ -0.17
SMARCB1-204ENST00000407422 NUP62P37198 522 aaPredicted RBP13.97□□□□□ -0.17
SMARCB1-204ENST00000407422 RPP30P78346 268 aaKnown RBP13.97□□□□□ -0.17
SMARCB1-204ENST00000407422 PFDN2Q9UHV9 154 aa13.97□□□□□ -0.17
SMARCB1-204ENST00000407422 BTCP35070 178 aa13.97□□□□□ -0.17
SMARCB1-204ENST00000407422 GDF5OSQ5U4N7 250 aa13.97□□□□□ -0.17
SMARCB1-204ENST00000407422 OR4E1P0C645 316 aa13.96□□□□□ -0.17
SMARCB1-204ENST00000407422 MIFP14174 115 aa13.96□□□□□ -0.17
SMARCB1-204ENST00000407422 ANXA7P20073 488 aaKnown RBP13.96□□□□□ -0.17
SMARCB1-204ENST00000407422 POLR2GP62487 172 aaKnown RBP eCLIP13.96□□□□□ -0.17
SMARCB1-204ENST00000407422 ID3Q02535 119 aa13.96□□□□□ -0.17
SMARCB1-204ENST00000407422 C1orf194Q5T5A4 169 aa13.96□□□□□ -0.17
SMARCB1-204ENST00000407422 TMEM182Q6ZP80 229 aaPredicted RBP13.96□□□□□ -0.17
SMARCB1-204ENST00000407422 LINC00052Q96N35 136 aa13.96□□□□□ -0.17
SMARCB1-204ENST00000407422 XCL2Q9UBD3 114 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms