RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 RARRES2Q99969 163 aa9.84□□□□□ -0.83
VCX3A-202ENST00000398729 SRRQ9GZT4 340 aa9.84□□□□□ -0.83
VCX3A-202ENST00000398729 TMED3Q9Y3Q3 217 aa9.84□□□□□ -0.83
VCX3A-202ENST00000398729 ZFP92A6NM28 416 aa9.83□□□□□ -0.84
VCX3A-202ENST00000398729 FAM90A26D6RGX4 464 aa9.83□□□□□ -0.84
VCX3A-202ENST00000398729 ZNF688P0C7X2 276 aa9.83□□□□□ -0.84
VCX3A-202ENST00000398729 PSG1P11464 419 aa9.83□□□□□ -0.84
VCX3A-202ENST00000398729 RAB11AP62491 216 aa9.83□□□□□ -0.84
VCX3A-202ENST00000398729 EWSR1Q01844 656 aaKnown RBP eCLIP9.83□□□□□ -0.84
VCX3A-202ENST00000398729 DHRS2Q13268 280 aa9.83□□□□□ -0.84
VCX3A-202ENST00000398729 TRIQKQ629K1 86 aa9.83□□□□□ -0.84
VCX3A-202ENST00000398729 OR51G1Q8NGK1 321 aa9.83□□□□□ -0.84
VCX3A-202ENST00000398729 OR11H2Q8NH07 326 aa9.83□□□□□ -0.84
VCX3A-202ENST00000398729 GLMPQ8WWB7 406 aa9.83□□□□□ -0.84
VCX3A-202ENST00000398729 SLC35E1Q96K37 410 aa9.83□□□□□ -0.84
VCX3A-202ENST00000398729 NAP1L6A6NFF2 107 aa9.82□□□□□ -0.84
VCX3A-202ENST00000398729 BUB3O43684 328 aa9.82□□□□□ -0.84
VCX3A-202ENST00000398729 FABP1P07148 127 aa9.82□□□□□ -0.84
VCX3A-202ENST00000398729 IAPPP10997 89 aa9.82□□□□□ -0.84
VCX3A-202ENST00000398729 RPP30P78346 268 aaKnown RBP9.82□□□□□ -0.84
VCX3A-202ENST00000398729 GAMTQ14353 236 aa9.82□□□□□ -0.84
VCX3A-202ENST00000398729 RNF125Q96EQ8 232 aa9.82□□□□□ -0.84
VCX3A-202ENST00000398729 CIB3Q96Q77 187 aaPredicted RBP9.82□□□□□ -0.84
VCX3A-202ENST00000398729 PFDN2Q9UHV9 154 aa9.82□□□□□ -0.84
VCX3A-202ENST00000398729 PAIP2BQ9ULR5 123 aaKnown RBP9.82□□□□□ -0.84
VCX3A-202ENST00000398729 VPS13DQ5THJ4 4388 aa9.82□□□□□ -0.84
VCX3A-202ENST00000398729 HOXB5P09067 269 aa9.81□□□□□ -0.84
VCX3A-202ENST00000398729 NUP62P37198 522 aaPredicted RBP9.81□□□□□ -0.84
VCX3A-202ENST00000398729 UBE2MP61081 183 aaKnown RBP9.81□□□□□ -0.84
VCX3A-202ENST00000398729 TMEM41BQ5BJD5 291 aa9.81□□□□□ -0.84
VCX3A-202ENST00000398729 MORN3Q6PF18 240 aaPredicted RBP9.81□□□□□ -0.84
VCX3A-202ENST00000398729 CEMP1Q6PRD7 247 aaPredicted RBP9.81□□□□□ -0.84
VCX3A-202ENST00000398729 SIGLEC15Q6ZMC9 328 aa9.81□□□□□ -0.84
VCX3A-202ENST00000398729 TRPT1Q86TN4 253 aaKnown RBP9.81□□□□□ -0.84
VCX3A-202ENST00000398729 PBDC1Q9BVG4 233 aa9.81□□□□□ -0.84
VCX3A-202ENST00000398729 KNCNA6PVL3 124 aa9.8□□□□□ -0.84
VCX3A-202ENST00000398729 SYNGR2O43760 224 aa9.8□□□□□ -0.84
VCX3A-202ENST00000398729 SPP1P10451 314 aa9.8□□□□□ -0.84
VCX3A-202ENST00000398729 SNRPD3P62318 126 aaKnown RBP9.8□□□□□ -0.84
VCX3A-202ENST00000398729 ZNF90Q03938 601 aa9.8□□□□□ -0.84
VCX3A-202ENST00000398729 BAK1Q16611 211 aa9.8□□□□□ -0.84
VCX3A-202ENST00000398729 PSMG4Q5JS54 123 aa9.8□□□□□ -0.84
VCX3A-202ENST00000398729 ACTL10Q5JWF8 245 aa9.8□□□□□ -0.84
VCX3A-202ENST00000398729 GGNBP1Q5YKI7 109 aa9.8□□□□□ -0.84
VCX3A-202ENST00000398729 OR8G2PQ6IF36 304 aa9.8□□□□□ -0.84
VCX3A-202ENST00000398729 LINC00476Q8WZB0 136 aa9.8□□□□□ -0.84
VCX3A-202ENST00000398729 C11orf68Q9H3H3 251 aaKnown RBP9.8□□□□□ -0.84
VCX3A-202ENST00000398729 NRN1Q9NPD7 142 aa9.8□□□□□ -0.84
VCX3A-202ENST00000398729 KLK5Q9Y337 293 aaPredicted RBP9.8□□□□□ -0.84
VCX3A-202ENST00000398729 IGKV1D-37A0A075B6S9 117 aa9.79□□□□□ -0.84
VCX3A-202ENST00000398729 C9orf170A2RU37 121 aa9.79□□□□□ -0.84
VCX3A-202ENST00000398729 CENPXA8MT69 81 aa9.79□□□□□ -0.84
VCX3A-202ENST00000398729 SNRPGP15A8MWD9 76 aa9.79□□□□□ -0.84
VCX3A-202ENST00000398729 WRBO00258 174 aa9.79□□□□□ -0.84
VCX3A-202ENST00000398729 NDUFB6O95139 128 aa9.79□□□□□ -0.84
VCX3A-202ENST00000398729 RAB40CQ96S21 281 aa9.79□□□□□ -0.84
VCX3A-202ENST00000398729 TRGV9Q99603 122 aa9.79□□□□□ -0.84
VCX3A-202ENST00000398729 MAGT1Q9H0U3 335 aa9.79□□□□□ -0.84
VCX3A-202ENST00000398729 SEPSECSQ9HD40 501 aaKnown RBP9.79□□□□□ -0.84
VCX3A-202ENST00000398729 AGRNO00468 2067 aa9.78□□□□□ -0.84
VCX3A-202ENST00000398729 LINC00854A0A1B0GVQ3 168 aa9.78□□□□□ -0.84
VCX3A-202ENST00000398729 LYZP61626 148 aa9.78□□□□□ -0.84
VCX3A-202ENST00000398729 COQ8AQ8NI60 647 aa9.78□□□□□ -0.84
VCX3A-202ENST00000398729 PHLDA1Q8WV24 401 aaPredicted RBP9.78□□□□□ -0.84
VCX3A-202ENST00000398729 MFFQ9GZY8 342 aa9.78□□□□□ -0.84
VCX3A-202ENST00000398729 FLVCR2Q9UPI3 526 aa9.78□□□□□ -0.84
VCX3A-202ENST00000398729 ADAP1O75689 374 aa9.77□□□□□ -0.85
VCX3A-202ENST00000398729 IFNA21P01568 189 aa9.77□□□□□ -0.85
VCX3A-202ENST00000398729 GIG44P09565 113 aaPredicted RBP9.77□□□□□ -0.85
VCX3A-202ENST00000398729 OR2F1Q13607 317 aa9.77□□□□□ -0.85
VCX3A-202ENST00000398729 SPANXN5Q5MJ07 72 aa9.77□□□□□ -0.85
VCX3A-202ENST00000398729 C1orf194Q5T5A4 169 aa9.77□□□□□ -0.85
VCX3A-202ENST00000398729 THAP8Q8NA92 274 aa9.77□□□□□ -0.85
VCX3A-202ENST00000398729 C11orf45Q8TAV5 145 aa9.77□□□□□ -0.85
VCX3A-202ENST00000398729 PPP1R14BQ96C90 147 aa9.77□□□□□ -0.85
VCX3A-202ENST00000398729 SDHCQ99643 169 aaPredicted RBP9.77□□□□□ -0.85
VCX3A-202ENST00000398729 C7orf50Q9BRJ6 194 aaKnown RBP9.77□□□□□ -0.85
VCX3A-202ENST00000398729 FBXL17Q9UF56 701 aa9.77□□□□□ -0.85
VCX3A-202ENST00000398729 STRAPQ9Y3F4 350 aaKnown RBP9.77□□□□□ -0.85
VCX3A-202ENST00000398729 IGKV1OR2-108A0A075B7D4 117 aa9.76□□□□□ -0.85
VCX3A-202ENST00000398729 DEFB4AO15263 64 aa9.76□□□□□ -0.85
VCX3A-202ENST00000398729 LY6G6CO95867 125 aa9.76□□□□□ -0.85
VCX3A-202ENST00000398729 CFDP00746 253 aaPredicted RBP9.76□□□□□ -0.85
VCX3A-202ENST00000398729 OR4E1P0C645 316 aa9.76□□□□□ -0.85
VCX3A-202ENST00000398729 C4BPBP20851 252 aa9.76□□□□□ -0.85
VCX3A-202ENST00000398729 NUTF2P61970 127 aaKnown RBP9.76□□□□□ -0.85
VCX3A-202ENST00000398729 C4orf46Q504U0 113 aa9.76□□□□□ -0.85
VCX3A-202ENST00000398729 NDUFA13Q9P0J0 144 aa9.76□□□□□ -0.85
VCX3A-202ENST00000398729 PRSS46E5RG02 174 aa9.75□□□□□ -0.85
VCX3A-202ENST00000398729 H3BP45 60 aa9.75□□□□□ -0.85
VCX3A-202ENST00000398729 IL7P13232 177 aa9.75□□□□□ -0.85
VCX3A-202ENST00000398729 MIFP14174 115 aa9.75□□□□□ -0.85
VCX3A-202ENST00000398729 ANXA7P20073 488 aaKnown RBP9.75□□□□□ -0.85
VCX3A-202ENST00000398729 ID1P41134 155 aa9.75□□□□□ -0.85
VCX3A-202ENST00000398729 NKX2-1P43699 371 aaPredicted RBP9.75□□□□□ -0.85
VCX3A-202ENST00000398729 NANOS2P60321 138 aaKnown RBP9.75□□□□□ -0.85
VCX3A-202ENST00000398729 POLR2GP62487 172 aaKnown RBP eCLIP9.75□□□□□ -0.85
VCX3A-202ENST00000398729 ID3Q02535 119 aa9.75□□□□□ -0.85
VCX3A-202ENST00000398729 AKR1C1Q04828 323 aa9.75□□□□□ -0.85
VCX3A-202ENST00000398729 CNPY1Q3B7I2 92 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms