RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 COMPP49747 757 aaPredicted RBP15.32■□□□□ 0.04
PDLIM2-204ENST00000397760 GCSAMLQ5JQS6 135 aa15.32■□□□□ 0.04
PDLIM2-204ENST00000397760 TEX29Q8N6K0 151 aa15.32■□□□□ 0.04
PDLIM2-204ENST00000397760 Q8N9W7 124 aa15.32■□□□□ 0.04
PDLIM2-204ENST00000397760 OR10W1Q8NGF6 305 aa15.32■□□□□ 0.04
PDLIM2-204ENST00000397760 OR5R1Q8NH85 324 aa15.32■□□□□ 0.04
PDLIM2-204ENST00000397760 PACRGQ96M98 296 aaPredicted RBP15.32■□□□□ 0.04
PDLIM2-204ENST00000397760 A0A1W2PN81 502 aa15.31■□□□□ 0.04
PDLIM2-204ENST00000397760 H3BUX3 64 aa15.31■□□□□ 0.04
PDLIM2-204ENST00000397760 CHRNA7P36544 502 aa15.31■□□□□ 0.04
PDLIM2-204ENST00000397760 ATP5G3P48201 142 aa15.31■□□□□ 0.04
PDLIM2-204ENST00000397760 MIC13Q5XKP0 118 aa15.31■□□□□ 0.04
PDLIM2-204ENST00000397760 NECAP1Q8NC96 275 aa15.31■□□□□ 0.04
PDLIM2-204ENST00000397760 YAE1D1Q9NRH1 226 aa15.31■□□□□ 0.04
PDLIM2-204ENST00000397760 LY96Q9Y6Y9 160 aa15.31■□□□□ 0.04
PDLIM2-204ENST00000397760 A0A1W2PPQ1 181 aa15.31■□□□□ 0.04
PDLIM2-204ENST00000397760 NDUFB4O95168 129 aa15.31■□□□□ 0.04
PDLIM2-204ENST00000397760 SSBP2P81877 361 aaPredicted RBP15.31■□□□□ 0.04
PDLIM2-204ENST00000397760 ARSJQ5FYB0 599 aaPredicted RBP15.31■□□□□ 0.04
PDLIM2-204ENST00000397760 TMEM144Q7Z5S9 345 aa15.31■□□□□ 0.04
PDLIM2-204ENST00000397760 TMEM219Q86XT9 240 aa15.31■□□□□ 0.04
PDLIM2-204ENST00000397760 RBM14Q96PK6 669 aaKnown RBP15.31■□□□□ 0.04
PDLIM2-204ENST00000397760 NOTCH2Q04721 2471 aa15.31■□□□□ 0.04
PDLIM2-204ENST00000397760 TRAV9-1A0A075B6T8 112 aa15.3■□□□□ 0.04
PDLIM2-204ENST00000397760 CNIH1O95406 144 aa15.3■□□□□ 0.04
PDLIM2-204ENST00000397760 AREGP15514 252 aa15.3■□□□□ 0.04
PDLIM2-204ENST00000397760 IL17RELQ6ZVW7 336 aa15.3■□□□□ 0.04
PDLIM2-204ENST00000397760 C11orf52Q96A22 123 aa15.3■□□□□ 0.04
PDLIM2-204ENST00000397760 RASL11BQ9BPW5 248 aa15.3■□□□□ 0.04
PDLIM2-204ENST00000397760 SLC25A33Q9BSK2 321 aa15.3■□□□□ 0.04
PDLIM2-204ENST00000397760 C19orf24Q9BVV8 132 aa15.3■□□□□ 0.04
PDLIM2-204ENST00000397760 ELOVL1Q9BW60 279 aa15.3■□□□□ 0.04
PDLIM2-204ENST00000397760 TNCP24821 2201 aa15.3■□□□□ 0.04
PDLIM2-204ENST00000397760 DEFA4P12838 97 aa15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 GCHFRP30047 84 aa15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 PRR20EP86478 221 aa15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 PRR20CP86479 221 aa15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 PRR20DP86480 221 aa15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 PRR20BP86481 221 aa15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 PRR20AP86496 221 aa15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 LY6EQ16553 131 aa15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 SRSF12Q8WXF0 261 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 PRDM13Q9H4Q3 707 aa15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 TET2Q6N021 2002 aaPredicted RBP15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 CSPG4Q6UVK1 2322 aa15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 A6NDX4 124 aa15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 INS-IGF2F8WCM5 200 aa15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 UBE2G2P60604 165 aa15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 ERHP84090 104 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 FXYD3Q14802 87 aa15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 ZNF562Q6V9R5 426 aa15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 STPG3Q8N7X2 389 aa15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 SFRP2Q96HF1 295 aa15.29■□□□□ 0.04
PDLIM2-204ENST00000397760 XKRY2A2RUG3 117 aa15.28■□□□□ 0.04
PDLIM2-204ENST00000397760 CX3CL1P78423 397 aa15.28■□□□□ 0.04
PDLIM2-204ENST00000397760 WT1-ASQ06250 92 aa15.28■□□□□ 0.04
PDLIM2-204ENST00000397760 JOSD1Q15040 202 aaPredicted RBP15.28■□□□□ 0.04
PDLIM2-204ENST00000397760 PDZD11Q5EBL8 140 aa15.28■□□□□ 0.04
PDLIM2-204ENST00000397760 SLC35E1Q96K37 410 aa15.28■□□□□ 0.04
PDLIM2-204ENST00000397760 MOB4Q9Y3A3 225 aa15.28■□□□□ 0.04
PDLIM2-204ENST00000397760 FLNAP21333 2647 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-204ENST00000397760 TEX15Q9BXT5 2789 aa15.28■□□□□ 0.04
PDLIM2-204ENST00000397760 C9JCJ5 164 aa15.27■□□□□ 0.04
PDLIM2-204ENST00000397760 C2orf83Q53S99 150 aa15.27■□□□□ 0.04
PDLIM2-204ENST00000397760 UHRF2Q96PU4 802 aa15.27■□□□□ 0.04
PDLIM2-204ENST00000397760 IGLC7A0M8Q6 106 aa15.27■□□□□ 0.03
PDLIM2-204ENST00000397760 TEX22C9J3V5 150 aa15.27■□□□□ 0.03
PDLIM2-204ENST00000397760 IGHV4-59P01825 116 aa15.27■□□□□ 0.03
PDLIM2-204ENST00000397760 HLA-DRB1P01911 266 aa15.27■□□□□ 0.03
PDLIM2-204ENST00000397760 IER3P46695 156 aa15.27■□□□□ 0.03
PDLIM2-204ENST00000397760 PKIAP61925 76 aa15.27■□□□□ 0.03
PDLIM2-204ENST00000397760 FAM209BQ5JX69 171 aa15.27■□□□□ 0.03
PDLIM2-204ENST00000397760 MRPL41Q8IXM3 137 aaKnown RBP15.27■□□□□ 0.03
PDLIM2-204ENST00000397760 C5orf56Q8N8D9 126 aa15.27■□□□□ 0.03
PDLIM2-204ENST00000397760 ZNF48Q96MX3 618 aaPredicted RBP15.27■□□□□ 0.03
PDLIM2-204ENST00000397760 GCGP01275 180 aa15.26■□□□□ 0.03
PDLIM2-204ENST00000397760 AMBPP02760 352 aa15.26■□□□□ 0.03
PDLIM2-204ENST00000397760 APELAP0DMC3 54 aa15.26■□□□□ 0.03
PDLIM2-204ENST00000397760 SSMEM1Q8WWF3 244 aa15.26■□□□□ 0.03
PDLIM2-204ENST00000397760 TMEM167BQ9NRX6 74 aa15.26■□□□□ 0.03
PDLIM2-204ENST00000397760 SLC45A2Q9UMX9 530 aa15.26■□□□□ 0.03
PDLIM2-204ENST00000397760 MYO9AB2RTY4 2548 aa15.25■□□□□ 0.03
PDLIM2-204ENST00000397760 IGHV7-81A0A0B4J1V7 117 aa15.25■□□□□ 0.03
PDLIM2-204ENST00000397760 REG1AP05451 166 aa15.25■□□□□ 0.03
PDLIM2-204ENST00000397760 RNASE2P10153 161 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-204ENST00000397760 RPL15P61313 204 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-204ENST00000397760 FAM78BQ5VT40 261 aa15.25■□□□□ 0.03
PDLIM2-204ENST00000397760 Q6YL49 198 aa15.25■□□□□ 0.03
PDLIM2-204ENST00000397760 ARPC1AQ92747 370 aa15.25■□□□□ 0.03
PDLIM2-204ENST00000397760 SMR3AQ99954 134 aa15.25■□□□□ 0.03
PDLIM2-204ENST00000397760 FUT9Q9Y231 359 aa15.25■□□□□ 0.03
PDLIM2-204ENST00000397760 LINC00869P0C866 280 aa15.24■□□□□ 0.03
PDLIM2-204ENST00000397760 HSPB9Q9BQS6 159 aa15.24■□□□□ 0.03
PDLIM2-204ENST00000397760 SRSF8Q9BRL6 282 aaKnown RBP15.24■□□□□ 0.03
PDLIM2-204ENST00000397760 FAM103A1Q9BTL3 118 aaKnown RBP15.24■□□□□ 0.03
PDLIM2-204ENST00000397760 DERL1Q9BUN8 251 aa15.24■□□□□ 0.03
PDLIM2-204ENST00000397760 SEPSECSQ9HD40 501 aaKnown RBP15.24■□□□□ 0.03
PDLIM2-204ENST00000397760 TRBV20OR9-2A0A075B6H5 130 aa15.24■□□□□ 0.03
PDLIM2-204ENST00000397760 SH2D7A6NKC9 451 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-204ENST00000397760 TSTD3H0UI37 97 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms