RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 TRAV8-1A0A0A6YYK1 113 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 IGHV1-69-2A0A0G2JMI3 117 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 A0A1W2PPI3 338 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 MT-ND6P03923 174 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 NPSP0C0P6 89 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 PPOXP50336 477 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 CR1LQ2VPA4 569 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 NUDT10Q8NFP7 164 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 FAM222BQ8WU58 562 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 NUDT11Q96G61 164 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 FBXL7Q9UJT9 491 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 TCRBV4S1A1TA0A5B7 111 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 M0QZ24 198 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 P01737 135 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 MMDQ15546 238 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 PMCHL1Q16048 86 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 TBR1Q16650 682 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 RNF2Q99496 336 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 GNB1LQ9BYB4 327 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 TMSB15BA0A087X1C1 80 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 PRSS47A8MTI9 375 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 HIST1H1EP10412 219 aaKnown RBP8.52□□□□□ -1.05
ACTN1-203ENST00000394419 COL8A1P27658 744 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 HNRNPA3P51991 378 aaKnown RBP8.52□□□□□ -1.05
ACTN1-203ENST00000394419 ARF6P62330 175 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 MEF2CQ06413 473 aaPredicted RBP8.52□□□□□ -1.05
ACTN1-203ENST00000394419 TMEM249Q2WGJ8 235 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 TMEM177Q53S58 311 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 C2orf88Q9BSF0 95 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 C19orf24Q9BVV8 132 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 SLC25A2Q9BXI2 301 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 MRPL32Q9BYC8 188 aaKnown RBP8.52□□□□□ -1.05
ACTN1-203ENST00000394419 ARL2-SNX15V9GYD0 113 aa8.52□□□□□ -1.05
ACTN1-203ENST00000394419 IGHV3-35A0A0C4DH35 117 aa8.51□□□□□ -1.05
ACTN1-203ENST00000394419 ITGB1BP1O14713 200 aa8.51□□□□□ -1.05
ACTN1-203ENST00000394419 CD3EP07766 207 aa8.51□□□□□ -1.05
ACTN1-203ENST00000394419 PRRX1P54821 245 aa8.51□□□□□ -1.05
ACTN1-203ENST00000394419 SELENOTP62341 195 aa8.51□□□□□ -1.05
ACTN1-203ENST00000394419 C11orf52Q96A22 123 aa8.51□□□□□ -1.05
ACTN1-203ENST00000394419 NCBP2LA6PVI3 153 aaKnown RBP8.51□□□□□ -1.05
ACTN1-203ENST00000394419 GPX1P07203 203 aa8.51□□□□□ -1.05
ACTN1-203ENST00000394419 MC5RP33032 325 aa8.51□□□□□ -1.05
ACTN1-203ENST00000394419 RBPJQ06330 500 aa8.51□□□□□ -1.05
ACTN1-203ENST00000394419 SLAQ13239 276 aa8.51□□□□□ -1.05
ACTN1-203ENST00000394419 GOLT1AQ6ZVE7 132 aa8.51□□□□□ -1.05
ACTN1-203ENST00000394419 CTSZQ9UBR2 303 aa8.51□□□□□ -1.05
ACTN1-203ENST00000394419 IGHV3OR16-8A0A075B7F1 116 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 BMPR1BO00238 502 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 AARDQ4LEZ3 155 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 DNLZQ5SXM8 178 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 TMEM136Q6ZRR5 245 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 PNKDQ8N490 385 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 OR5AN1Q8NGI8 311 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 RASL11BQ9BPW5 248 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 TP53TG3Q9ULZ0 132 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 SPENQ96T58 3664 aaKnown RBP8.5□□□□□ -1.05
ACTN1-203ENST00000394419 CEACAM8P31997 349 aaPredicted RBP8.5□□□□□ -1.05
ACTN1-203ENST00000394419 ZNF833PQ6ZTB9 187 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 NUP35Q8NFH5 326 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 TMEM167AQ8TBQ9 72 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 ST6GALNAC6Q969X2 333 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 MUC21A0A0G2JKD1 596 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 MUC21A0A140T8X8 626 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 A0A1W2PS18 150 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 IZUMO1RA6ND01 250 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 ZNF324O75467 553 aaPredicted RBP8.5□□□□□ -1.05
ACTN1-203ENST00000394419 RPLP1P05386 114 aaKnown RBP8.5□□□□□ -1.05
ACTN1-203ENST00000394419 IGHV1-8P0DP01 117 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 POU2AF1Q16633 256 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 LBHQ53QV2 105 aaPredicted RBP8.5□□□□□ -1.05
ACTN1-203ENST00000394419 KLF17Q5JT82 389 aaPredicted RBP8.5□□□□□ -1.05
ACTN1-203ENST00000394419 MUC21Q5SSG8 566 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 EXOC3-AS1Q8N2X6 119 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 BEND2Q8NDZ0 799 aa8.5□□□□□ -1.05
ACTN1-203ENST00000394419 TRBV9A0A0B4J1U6 114 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 PPIAL4CA0A0B4J2A2 164 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.49□□□□□ -1.05
ACTN1-203ENST00000394419 SERTM2A0A1B0GWG4 89 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 PPIAL4GP0DN37 164 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 TMEM11P17152 192 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 TCTAP57738 103 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 PATE2Q6UY27 113 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 KCNS1Q96KK3 526 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 TMEM133Q9H2Q1 129 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 EPDR1Q9UM22 224 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 RELNP78509 3460 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 HINT1P49773 126 aaPredicted RBP8.49□□□□□ -1.05
ACTN1-203ENST00000394419 RNF151Q2KHN1 245 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 MIEN1Q9BRT3 115 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 CLEC5AQ9NY25 188 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 HIGD1AQ9Y241 93 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 TRAV9-1A0A075B6T8 112 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 SH2D7A6NKC9 451 aaPredicted RBP8.49□□□□□ -1.05
ACTN1-203ENST00000394419 E7EQL1 145 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 IGHV3-23P01764 117 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 C3orf79P0CE67 100 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 RAB4AP20338 218 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 LOXP28300 417 aaPredicted RBP8.49□□□□□ -1.05
ACTN1-203ENST00000394419 TEX36Q5VZQ5 186 aa8.49□□□□□ -1.05
ACTN1-203ENST00000394419 ZNF329Q86UD4 541 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms