RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 MIR17HGQ75NE6 70 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 HSPB9Q9BQS6 159 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 MINOS1-NBL1R4GNA1 71 aa11.85□□□□□ -0.51
MKS1-202ENST00000393119 INS-IGF2F8WCM5 200 aa11.84□□□□□ -0.51
MKS1-202ENST00000393119 MSMBP08118 114 aa11.84□□□□□ -0.51
MKS1-202ENST00000393119 POLR3KQ9Y2Y1 108 aaPredicted RBP11.84□□□□□ -0.51
MKS1-202ENST00000393119 TRAV5A0A0B4J249 113 aa11.84□□□□□ -0.51
MKS1-202ENST00000393119 KIR2DL5BA0A0G2JN68 375 aa11.84□□□□□ -0.51
MKS1-202ENST00000393119 KIR2DL5BA0A0G2JPC4 375 aa11.84□□□□□ -0.51
MKS1-202ENST00000393119 MT-CO2P00403 227 aa11.84□□□□□ -0.51
MKS1-202ENST00000393119 RAB4AP20338 218 aa11.84□□□□□ -0.51
MKS1-202ENST00000393119 KIR2DL5AQ8N109 375 aa11.84□□□□□ -0.51
MKS1-202ENST00000393119 Q8N9W7 124 aa11.84□□□□□ -0.51
MKS1-202ENST00000393119 OR51G1Q8NGK1 321 aa11.84□□□□□ -0.51
MKS1-202ENST00000393119 TMEM37Q8WXS4 190 aa11.84□□□□□ -0.51
MKS1-202ENST00000393119 CUBNO60494 3623 aa11.84□□□□□ -0.51
MKS1-202ENST00000393119 A0A096LNT2 108 aa11.83□□□□□ -0.52
MKS1-202ENST00000393119 MDFIC2A0A1B0GVS7 189 aa11.83□□□□□ -0.52
MKS1-202ENST00000393119 A0A1W2PPV4 95 aa11.83□□□□□ -0.52
MKS1-202ENST00000393119 PAGE4O60829 102 aa11.83□□□□□ -0.52
MKS1-202ENST00000393119 MPDU1O75352 247 aa11.83□□□□□ -0.52
MKS1-202ENST00000393119 ARL14EPLP0DKL9 152 aa11.83□□□□□ -0.52
MKS1-202ENST00000393119 CCDC144NLQ6NUI1 221 aa11.83□□□□□ -0.52
MKS1-202ENST00000393119 OR5T1Q8NG75 326 aa11.83□□□□□ -0.52
MKS1-202ENST00000393119 UHRF2Q96PU4 802 aa11.83□□□□□ -0.52
MKS1-202ENST00000393119 ATG101Q9BSB4 218 aa11.83□□□□□ -0.52
MKS1-202ENST00000393119 F11RQ9Y624 299 aaKnown RBP11.83□□□□□ -0.52
MKS1-202ENST00000393119 TEX15Q9BXT5 2789 aa11.83□□□□□ -0.52
MKS1-202ENST00000393119 GCN1Q92616 2671 aaKnown RBP11.83□□□□□ -0.52
MKS1-202ENST00000393119 EGR2P11161 476 aaPredicted RBP11.83□□□□□ -0.52
MKS1-202ENST00000393119 FAM78BQ5VT40 261 aa11.83□□□□□ -0.52
MKS1-202ENST00000393119 CYP2G1PQ6ZSU1 146 aa11.83□□□□□ -0.52
MKS1-202ENST00000393119 SLC35E1Q96K37 410 aa11.83□□□□□ -0.52
MKS1-202ENST00000393119 RNF5Q99942 180 aa11.83□□□□□ -0.52
MKS1-202ENST00000393119 CCDC168Q8NDH2 2452 aa11.82□□□□□ -0.52
MKS1-202ENST00000393119 IGHV1-69DA0A0B4J2H0 117 aa11.82□□□□□ -0.52
MKS1-202ENST00000393119 XKRY2A2RUG3 117 aa11.82□□□□□ -0.52
MKS1-202ENST00000393119 IGHV1-69P01742 117 aa11.82□□□□□ -0.52
MKS1-202ENST00000393119 IGHV3-23P01764 117 aa11.82□□□□□ -0.52
MKS1-202ENST00000393119 MBP02144 154 aa11.82□□□□□ -0.52
MKS1-202ENST00000393119 RPL29P47914 159 aaKnown RBP11.82□□□□□ -0.52
MKS1-202ENST00000393119 PIFOQ8TCI5 191 aa11.82□□□□□ -0.52
MKS1-202ENST00000393119 LINC00527Q9UJ94 153 aa11.82□□□□□ -0.52
MKS1-202ENST00000393119 TBL2Q9Y4P3 447 aaKnown RBP11.82□□□□□ -0.52
MKS1-202ENST00000393119 PRRC2AP48634 2157 aaKnown RBP11.82□□□□□ -0.52
MKS1-202ENST00000393119 IGHV7-81A0A0B4J1V7 117 aa11.82□□□□□ -0.52
MKS1-202ENST00000393119 TYMSP04818 313 aa11.82□□□□□ -0.52
MKS1-202ENST00000393119 SUB1P53999 127 aaKnown RBP eCLIP11.82□□□□□ -0.52
MKS1-202ENST00000393119 ERVFC1-1P60608 527 aa11.82□□□□□ -0.52
MKS1-202ENST00000393119 LY6EQ16553 131 aa11.82□□□□□ -0.52
MKS1-202ENST00000393119 ACTL10Q5JWF8 245 aa11.82□□□□□ -0.52
MKS1-202ENST00000393119 TEX38Q6PEX7 206 aa11.82□□□□□ -0.52
MKS1-202ENST00000393119 ATP5G3P48201 142 aa11.81□□□□□ -0.52
MKS1-202ENST00000393119 EBI3Q14213 229 aa11.81□□□□□ -0.52
MKS1-202ENST00000393119 C1orf194Q5T5A4 169 aa11.81□□□□□ -0.52
MKS1-202ENST00000393119 C16orf82Q7Z2V1 217 aa11.81□□□□□ -0.52
MKS1-202ENST00000393119 MRPL52Q86TS9 123 aaKnown RBP11.81□□□□□ -0.52
MKS1-202ENST00000393119 NAT8Q9UHE5 227 aa11.81□□□□□ -0.52
MKS1-202ENST00000393119 MXRA5Q9NR99 2828 aa11.81□□□□□ -0.52
MKS1-202ENST00000393119 FAM106CPP0CH98 169 aa11.81□□□□□ -0.52
MKS1-202ENST00000393119 FAM3BP58499 235 aaPredicted RBP11.81□□□□□ -0.52
MKS1-202ENST00000393119 PATE2Q6UY27 113 aa11.81□□□□□ -0.52
MKS1-202ENST00000393119 ITPR2Q14571 2701 aa11.8□□□□□ -0.52
MKS1-202ENST00000393119 OR10J4P0C629 311 aa11.8□□□□□ -0.52
MKS1-202ENST00000393119 GAGE1Q13065 139 aa11.8□□□□□ -0.52
MKS1-202ENST00000393119 RAB31Q13636 194 aa11.8□□□□□ -0.52
MKS1-202ENST00000393119 BCL6BQ8N143 479 aaPredicted RBP11.8□□□□□ -0.52
MKS1-202ENST00000393119 CACNG8Q8WXS5 425 aa11.8□□□□□ -0.52
MKS1-202ENST00000393119 ARPC1AQ92747 370 aa11.8□□□□□ -0.52
MKS1-202ENST00000393119 AKAP9Q99996 3911 aa11.8□□□□□ -0.52
MKS1-202ENST00000393119 PPP5D1E7EU14 171 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 I3L2K1 104 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 M0R143 59 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 GGCTO75223 188 aaKnown RBP11.79□□□□□ -0.52
MKS1-202ENST00000393119 CRYGCP07315 174 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 NPPCP23582 126 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 IQCJQ1A5X6 159 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 PVRIGQ6DKI7 326 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 ZNF562Q6V9R5 426 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 ZNF503Q96F45 646 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 ZNF705GA8MUZ8 300 aaPredicted RBP11.79□□□□□ -0.52
MKS1-202ENST00000393119 OOSP1A8MZH6 123 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 G3V318 75 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 J3QKU1 62 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 TGFAP01135 160 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 STAG3L2P0CL84 134 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 STAG3L3P0CL85 134 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 CST9LP1Q5W188 147 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 GBGT1Q8N5D6 347 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 ZNF114Q8NC26 417 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 OR4F5Q8NH21 305 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 TMEM18Q96B42 140 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 OR4F4Q96R69 305 aa11.79□□□□□ -0.52
MKS1-202ENST00000393119 B4DSR2 109 aa11.78□□□□□ -0.52
MKS1-202ENST00000393119 FNDC10F2Z333 226 aa11.78□□□□□ -0.52
MKS1-202ENST00000393119 K7EIM0 57 aa11.78□□□□□ -0.52
MKS1-202ENST00000393119 PRB4P10163 310 aaPredicted RBP11.78□□□□□ -0.52
MKS1-202ENST00000393119 ORM2P19652 201 aa11.78□□□□□ -0.52
MKS1-202ENST00000393119 RPL23P62829 140 aaKnown RBP11.78□□□□□ -0.52
MKS1-202ENST00000393119 DEFB113Q30KQ7 82 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms