RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 TMEM183BQ1AE95 376 aa7.82□□□□□ -1.16
COL6A3-204ENST00000392003 LYPD2Q6UXB3 125 aa7.82□□□□□ -1.16
COL6A3-204ENST00000392003 Q6ZWC4 215 aa7.82□□□□□ -1.16
COL6A3-204ENST00000392003 OR9G1Q8NH87 305 aa7.82□□□□□ -1.16
COL6A3-204ENST00000392003 IMMP2LQ96T52 175 aa7.82□□□□□ -1.16
COL6A3-204ENST00000392003 FAM110AQ9BQ89 295 aa7.82□□□□□ -1.16
COL6A3-204ENST00000392003 RNF114Q9Y508 228 aa7.82□□□□□ -1.16
COL6A3-204ENST00000392003 YTHDF2Q9Y5A9 579 aaKnown RBP7.82□□□□□ -1.16
COL6A3-204ENST00000392003 K7EQM0 130 aa7.82□□□□□ -1.16
COL6A3-204ENST00000392003 SNAI2O43623 268 aa7.82□□□□□ -1.16
COL6A3-204ENST00000392003 CCDC144NLQ6NUI1 221 aa7.82□□□□□ -1.16
COL6A3-204ENST00000392003 FER1L6-AS1Q8NA97 138 aa7.82□□□□□ -1.16
COL6A3-204ENST00000392003 SGMS2Q8NHU3 365 aa7.82□□□□□ -1.16
COL6A3-204ENST00000392003 GEMIN7Q9H840 131 aaKnown RBP7.82□□□□□ -1.16
COL6A3-204ENST00000392003 IGHV1-69-2A0A0G2JMI3 117 aa7.81□□□□□ -1.16
COL6A3-204ENST00000392003 E7EQL1 145 aa7.81□□□□□ -1.16
COL6A3-204ENST00000392003 HYPMO75409 117 aa7.81□□□□□ -1.16
COL6A3-204ENST00000392003 TYMSP04818 313 aa7.81□□□□□ -1.16
COL6A3-204ENST00000392003 LINC00869P0C866 280 aa7.81□□□□□ -1.16
COL6A3-204ENST00000392003 LINC00311Q8N616 119 aa7.81□□□□□ -1.16
COL6A3-204ENST00000392003 OR1B1Q8NGR6 318 aa7.81□□□□□ -1.16
COL6A3-204ENST00000392003 TMEM167AQ8TBQ9 72 aa7.81□□□□□ -1.16
COL6A3-204ENST00000392003 C1orf159Q96HA4 380 aa7.81□□□□□ -1.16
COL6A3-204ENST00000392003 TRAPPC1Q9Y5R8 145 aa7.81□□□□□ -1.16
COL6A3-204ENST00000392003 AKAP6Q13023 2319 aa7.81□□□□□ -1.16
COL6A3-204ENST00000392003 FOXH1O75593 365 aa7.81□□□□□ -1.16
COL6A3-204ENST00000392003 NDUFA4L2Q9NRX3 87 aa7.81□□□□□ -1.16
COL6A3-204ENST00000392003 ARL2-SNX15V9GYD0 113 aa7.81□□□□□ -1.16
COL6A3-204ENST00000392003 PPOXP50336 477 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 ZNF90Q03938 601 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 FOXL1Q12952 345 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 HLA-DRB5Q30154 266 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 MOB3BQ86TA1 216 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 C8orf31Q8N9H6 132 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 OCC1Q8TAD7 63 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 NAA38Q9BRA0 125 aaKnown RBP7.8□□□□□ -1.16
COL6A3-204ENST00000392003 SPXQ9BT56 116 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 ATMQ13315 3056 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 C8orf88P0DMB2 117 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 LOXP28300 417 aaPredicted RBP7.8□□□□□ -1.16
COL6A3-204ENST00000392003 COA6Q5JTJ3 125 aaKnown RBP7.8□□□□□ -1.16
COL6A3-204ENST00000392003 MUC15Q8N387 334 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 ZNF114Q8NC26 417 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 ZNF586Q9NXT0 402 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 PSG8Q9UQ74 426 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 AREGP15514 252 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 GATA2P23769 480 aaPredicted RBP7.8□□□□□ -1.16
COL6A3-204ENST00000392003 GNG4P50150 75 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 TIGITQ495A1 244 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 ACTL10Q5JWF8 245 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 C11orf52Q96A22 123 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 MRPL32Q9BYC8 188 aaKnown RBP7.8□□□□□ -1.16
COL6A3-204ENST00000392003 YAE1D1Q9NRH1 226 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 KAAG1Q9UBP8 84 aa7.8□□□□□ -1.16
COL6A3-204ENST00000392003 ZFHX4Q86UP3 3567 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 HELTA6NFD8 242 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 SHISA9B4DS77 424 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 COX7A2P2O60397 106 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 PLAUP00749 431 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 GRNP28799 593 aaKnown RBP7.79□□□□□ -1.16
COL6A3-204ENST00000392003 TMEM155Q4W5P6 130 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 SPATA45Q537H7 98 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 OR1L4Q8NGR5 311 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 CTSZQ9UBR2 303 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 TNCP24821 2201 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 C9JCJ5 164 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 ESDP10768 282 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 CNN1P51911 297 aaKnown RBP7.79□□□□□ -1.16
COL6A3-204ENST00000392003 MLANAQ16655 118 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 LY96Q9Y6Y9 160 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 TSPAN13O95857 204 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 IGHV1-8P0DP01 117 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 RANP62826 216 aaKnown RBP7.79□□□□□ -1.16
COL6A3-204ENST00000392003 PNKDQ8N490 385 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 TMEM133Q9H2Q1 129 aa7.79□□□□□ -1.16
COL6A3-204ENST00000392003 TRBV20OR9-2A0A075B6H5 130 aa7.78□□□□□ -1.16
COL6A3-204ENST00000392003 CRYBB3P26998 211 aa7.78□□□□□ -1.16
COL6A3-204ENST00000392003 OR2T6Q8NHC8 308 aa7.78□□□□□ -1.16
COL6A3-204ENST00000392003 EAF1Q96JC9 268 aaPredicted RBP7.78□□□□□ -1.16
COL6A3-204ENST00000392003 RALYQ9UKM9 306 aaKnown RBP7.78□□□□□ -1.16
COL6A3-204ENST00000392003 NBEAQ8NFP9 2946 aa7.78□□□□□ -1.16
COL6A3-204ENST00000392003 CACNA1BQ00975 2339 aa7.78□□□□□ -1.16
COL6A3-204ENST00000392003 TRAV9-1A0A075B6T8 112 aa7.78□□□□□ -1.16
COL6A3-204ENST00000392003 INS-IGF2F8WCM5 200 aa7.78□□□□□ -1.16
COL6A3-204ENST00000392003 LYNX1G3V0Z9 82 aa7.78□□□□□ -1.16
COL6A3-204ENST00000392003 TAX1BP3O14907 124 aa7.78□□□□□ -1.16
COL6A3-204ENST00000392003 OR10J4P0C629 311 aa7.78□□□□□ -1.16
COL6A3-204ENST00000392003 LYNX1P0DP58 116 aa7.78□□□□□ -1.16
COL6A3-204ENST00000392003 SUMO1P63165 101 aaKnown RBP7.78□□□□□ -1.16
COL6A3-204ENST00000392003 UBE2L3P68036 154 aaKnown RBP7.78□□□□□ -1.16
COL6A3-204ENST00000392003 IL36BQ9NZH7 164 aa7.78□□□□□ -1.16
COL6A3-204ENST00000392003 IGKV1OR2-108A0A075B7D4 117 aa7.77□□□□□ -1.16
COL6A3-204ENST00000392003 IGHV3-72A0A0B4J1Y9 119 aa7.77□□□□□ -1.16
COL6A3-204ENST00000392003 TRAV8-6A0A0B4J262 113 aa7.77□□□□□ -1.16
COL6A3-204ENST00000392003 TNFRSF13BO14836 293 aaPredicted RBP7.77□□□□□ -1.16
COL6A3-204ENST00000392003 IGLC2P0DOY2 106 aa7.77□□□□□ -1.16
COL6A3-204ENST00000392003 IGLC3P0DOY3 106 aa7.77□□□□□ -1.16
COL6A3-204ENST00000392003 DIAPH2-AS1Q14236 149 aa7.77□□□□□ -1.16
COL6A3-204ENST00000392003 RPEL1Q2QD12 228 aa7.77□□□□□ -1.16
COL6A3-204ENST00000392003 C10orf55Q5SWW7 151 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms