RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 SMIM3Q9BZL3 60 aa9.63□□□□□ -0.87
SMN1-202ENST00000380707 PEMTQ9UBM1 199 aa9.63□□□□□ -0.87
SMN1-202ENST00000380707 UBE2L5PA0A1B0GUS4 154 aa9.62□□□□□ -0.87
SMN1-202ENST00000380707 RNF222A6NCQ9 220 aa9.62□□□□□ -0.87
SMN1-202ENST00000380707 C2orf70A6NJV1 201 aa9.62□□□□□ -0.87
SMN1-202ENST00000380707 SAP30O75446 220 aa9.62□□□□□ -0.87
SMN1-202ENST00000380707 GATA2P23769 480 aaPredicted RBP9.62□□□□□ -0.87
SMN1-202ENST00000380707 NUP62P37198 522 aaPredicted RBP9.62□□□□□ -0.87
SMN1-202ENST00000380707 OR2F1Q13607 317 aa9.62□□□□□ -0.87
SMN1-202ENST00000380707 TCTE3Q8IZS6 198 aa9.62□□□□□ -0.87
SMN1-202ENST00000380707 MGST2Q99735 147 aa9.62□□□□□ -0.87
SMN1-202ENST00000380707 ELOVL1Q9BW60 279 aa9.62□□□□□ -0.87
SMN1-202ENST00000380707 WFDC1Q9HC57 220 aa9.62□□□□□ -0.87
SMN1-202ENST00000380707 DAZ1Q9NQZ3 744 aaKnown RBP9.62□□□□□ -0.87
SMN1-202ENST00000380707 WDR83OSQ9Y284 106 aa9.62□□□□□ -0.87
SMN1-202ENST00000380707 UFC1Q9Y3C8 167 aa9.62□□□□□ -0.87
SMN1-202ENST00000380707 K7EMT4 169 aa9.61□□□□□ -0.87
SMN1-202ENST00000380707 AGPAT2O15120 278 aa9.61□□□□□ -0.87
SMN1-202ENST00000380707 ARPC5O15511 151 aa9.61□□□□□ -0.87
SMN1-202ENST00000380707 IL4P05112 153 aa9.61□□□□□ -0.87
SMN1-202ENST00000380707 FOLR2P14207 255 aa9.61□□□□□ -0.87
SMN1-202ENST00000380707 CBLN1P23435 193 aa9.61□□□□□ -0.87
SMN1-202ENST00000380707 AP2S1P53680 142 aaPredicted RBP9.61□□□□□ -0.87
SMN1-202ENST00000380707 ELLP55199 621 aaPredicted RBP9.61□□□□□ -0.87
SMN1-202ENST00000380707 OXLD1Q5BKU9 147 aa9.61□□□□□ -0.87
SMN1-202ENST00000380707 BTNL8Q6UX41 500 aa9.61□□□□□ -0.87
SMN1-202ENST00000380707 CYP2G1PQ6ZSU1 146 aa9.61□□□□□ -0.87
SMN1-202ENST00000380707 OR51G1Q8NGK1 321 aa9.61□□□□□ -0.87
SMN1-202ENST00000380707 ATP5SQ99766 215 aa9.61□□□□□ -0.87
SMN1-202ENST00000380707 MCRIP2Q9BUT9 160 aaKnown RBP9.61□□□□□ -0.87
SMN1-202ENST00000380707 MEGF8Q7Z7M0 2845 aa9.61□□□□□ -0.87
SMN1-202ENST00000380707 WI2-2373I1.2A0A1W2PRP0 233 aa9.61□□□□□ -0.87
SMN1-202ENST00000380707 FABP1P07148 127 aa9.61□□□□□ -0.87
SMN1-202ENST00000380707 USF2Q15853 346 aaPredicted RBP9.61□□□□□ -0.87
SMN1-202ENST00000380707 RNF125Q96EQ8 232 aa9.61□□□□□ -0.87
SMN1-202ENST00000380707 FBXL17Q9UF56 701 aa9.61□□□□□ -0.87
SMN1-202ENST00000380707 SLC45A2Q9UMX9 530 aa9.61□□□□□ -0.87
SMN1-202ENST00000380707 IGHV3-49A0A0A0MS15 119 aa9.6□□□□□ -0.87
SMN1-202ENST00000380707 HMSDA8MTL9 139 aa9.6□□□□□ -0.87
SMN1-202ENST00000380707 G3V4G9 280 aa9.6□□□□□ -0.87
SMN1-202ENST00000380707 APOHP02749 345 aaPredicted RBP9.6□□□□□ -0.87
SMN1-202ENST00000380707 C8orf88P0DMB2 117 aa9.6□□□□□ -0.87
SMN1-202ENST00000380707 FGF7P21781 194 aa9.6□□□□□ -0.87
SMN1-202ENST00000380707 CAMLGP49069 296 aa9.6□□□□□ -0.87
SMN1-202ENST00000380707 C9orf66Q5T8R8 295 aa9.6□□□□□ -0.87
SMN1-202ENST00000380707 BPIFCQ8NFQ6 507 aa9.6□□□□□ -0.87
SMN1-202ENST00000380707 NEURL2Q9BR09 285 aa9.6□□□□□ -0.87
SMN1-202ENST00000380707 GINS3Q9BRX5 216 aa9.6□□□□□ -0.87
SMN1-202ENST00000380707 PBDC1Q9BVG4 233 aa9.6□□□□□ -0.87
SMN1-202ENST00000380707 SIGLEC8Q9NYZ4 499 aa9.6□□□□□ -0.87
SMN1-202ENST00000380707 SELENOKQ9Y6D0 94 aa9.6□□□□□ -0.87
SMN1-202ENST00000380707 IGHV3OR16-13A0A075B7E8 117 aa9.59□□□□□ -0.87
SMN1-202ENST00000380707 IGHV3-74A0A0B4J1X5 117 aa9.59□□□□□ -0.87
SMN1-202ENST00000380707 IGHV7-4-1A0A0J9YVY3 117 aa9.59□□□□□ -0.87
SMN1-202ENST00000380707 DFFBO76075 338 aa9.59□□□□□ -0.87
SMN1-202ENST00000380707 NPPCP23582 126 aa9.59□□□□□ -0.87
SMN1-202ENST00000380707 CRYBB3P26998 211 aa9.59□□□□□ -0.87
SMN1-202ENST00000380707 INSL3P51460 131 aa9.59□□□□□ -0.87
SMN1-202ENST00000380707 LYZP61626 148 aa9.59□□□□□ -0.87
SMN1-202ENST00000380707 SELENOTP62341 195 aa9.59□□□□□ -0.87
SMN1-202ENST00000380707 RAB31Q13636 194 aa9.59□□□□□ -0.87
SMN1-202ENST00000380707 GGTLC1Q9BX51 225 aa9.59□□□□□ -0.87
SMN1-202ENST00000380707 NPCDR1Q9BY65 106 aa9.59□□□□□ -0.87
SMN1-202ENST00000380707 WDR61Q9GZS3 305 aaKnown RBP9.59□□□□□ -0.87
SMN1-202ENST00000380707 MFFQ9GZY8 342 aa9.59□□□□□ -0.87
SMN1-202ENST00000380707 MRPL27Q9P0M9 148 aaKnown RBP9.59□□□□□ -0.87
SMN1-202ENST00000380707 MLXQ9UH92 298 aa9.59□□□□□ -0.87
SMN1-202ENST00000380707 WIPF1O43516 503 aa9.58□□□□□ -0.88
SMN1-202ENST00000380707 MPDU1O75352 247 aa9.58□□□□□ -0.88
SMN1-202ENST00000380707 IGLV1-51P01701 117 aa9.58□□□□□ -0.88
SMN1-202ENST00000380707 C1QBP02746 253 aa9.58□□□□□ -0.88
SMN1-202ENST00000380707 LINC00869P0C866 280 aa9.58□□□□□ -0.88
SMN1-202ENST00000380707 SAMD5Q5TGI4 173 aa9.58□□□□□ -0.88
SMN1-202ENST00000380707 MARC2Q969Z3 335 aa9.58□□□□□ -0.88
SMN1-202ENST00000380707 METTL26Q96S19 204 aa9.58□□□□□ -0.88
SMN1-202ENST00000380707 SMPXQ9UHP9 88 aa9.58□□□□□ -0.88
SMN1-202ENST00000380707 IGHV3-66A0A0C4DH42 116 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 CHEK1O14757 476 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 CFDP00746 253 aaPredicted RBP9.57□□□□□ -0.88
SMN1-202ENST00000380707 IFNA5P01569 189 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 ORM2P19652 201 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 CXCL2P19875 107 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 PRR20EP86478 221 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 PRR20CP86479 221 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 PRR20DP86480 221 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 PRR20BP86481 221 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 PRR20AP86496 221 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 OPCMLQ14982 345 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 DEFB114Q30KQ6 69 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 MIC13Q5XKP0 118 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 STPG3Q8N7X2 389 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 ST8SIA2Q92186 375 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 RHPN1-AS1Q9BWJ2 59 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 DOK5Q9P104 306 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 RABAC1Q9UI14 185 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 U3KQE9 123 aa9.57□□□□□ -0.88
SMN1-202ENST00000380707 HNRNPCP07910 306 aaKnown RBP eCLIP9.56□□□□□ -0.88
SMN1-202ENST00000380707 RPL29P47914 159 aaKnown RBP9.56□□□□□ -0.88
SMN1-202ENST00000380707 PLP1P60201 277 aa9.56□□□□□ -0.88
SMN1-202ENST00000380707 ZNF345Q14585 488 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms