RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 VN1R17PQ8TDU5 208 aa13.71□□□□□ -0.22
SSBP3-203ENST00000371319 TXNDC17Q9BRA2 123 aa13.71□□□□□ -0.22
SSBP3-203ENST00000371319 NIPSNAP3BQ9BS92 247 aa13.71□□□□□ -0.22
SSBP3-203ENST00000371319 ARL2-SNX15V9GYD0 113 aa13.71□□□□□ -0.22
SSBP3-203ENST00000371319 CENPEQ02224 2701 aa13.7□□□□□ -0.22
SSBP3-203ENST00000371319 TRAV30A0A087WSZ9 112 aa13.7□□□□□ -0.22
SSBP3-203ENST00000371319 TRAV41A0A0B4J266 112 aa13.7□□□□□ -0.22
SSBP3-203ENST00000371319 GNG7O60262 68 aa13.7□□□□□ -0.22
SSBP3-203ENST00000371319 IGHV3-23P01764 117 aa13.7□□□□□ -0.22
SSBP3-203ENST00000371319 IGHV4-59P01825 116 aa13.7□□□□□ -0.22
SSBP3-203ENST00000371319 FABP1P07148 127 aa13.7□□□□□ -0.22
SSBP3-203ENST00000371319 RD3LP0DJH9 198 aa13.7□□□□□ -0.22
SSBP3-203ENST00000371319 FCGR2BP31994 310 aaPredicted RBP13.7□□□□□ -0.22
SSBP3-203ENST00000371319 Q56UQ5 140 aa13.7□□□□□ -0.22
SSBP3-203ENST00000371319 C9orf152Q5JTZ5 239 aa13.7□□□□□ -0.22
SSBP3-203ENST00000371319 TMEM88Q6PEY1 159 aa13.7□□□□□ -0.22
SSBP3-203ENST00000371319 CBLN2Q8IUK8 224 aa13.7□□□□□ -0.22
SSBP3-203ENST00000371319 TVP23CQ96ET8 276 aa13.7□□□□□ -0.22
SSBP3-203ENST00000371319 ABCA12Q86UK0 2595 aa13.7□□□□□ -0.22
SSBP3-203ENST00000371319 F6UZH7 168 aa13.69□□□□□ -0.22
SSBP3-203ENST00000371319 PDE6DO43924 150 aa13.69□□□□□ -0.22
SSBP3-203ENST00000371319 IGHG2P01859 326 aa13.69□□□□□ -0.22
SSBP3-203ENST00000371319 IGF1P05019 195 aa13.69□□□□□ -0.22
SSBP3-203ENST00000371319 OR10J4P0C629 311 aa13.69□□□□□ -0.22
SSBP3-203ENST00000371319 AKR1C3P42330 323 aa13.69□□□□□ -0.22
SSBP3-203ENST00000371319 IER3P46695 156 aa13.69□□□□□ -0.22
SSBP3-203ENST00000371319 YPEL3P61236 119 aaPredicted RBP13.69□□□□□ -0.22
SSBP3-203ENST00000371319 LYZP61626 148 aa13.69□□□□□ -0.22
SSBP3-203ENST00000371319 RHOGP84095 191 aa13.69□□□□□ -0.22
SSBP3-203ENST00000371319 RHEBQ15382 184 aa13.69□□□□□ -0.22
SSBP3-203ENST00000371319 TXN2Q99757 166 aa13.69□□□□□ -0.22
SSBP3-203ENST00000371319 RPS10P5Q9NQ39 176 aa13.69□□□□□ -0.22
SSBP3-203ENST00000371319 MRPL27Q9P0M9 148 aaKnown RBP13.69□□□□□ -0.22
SSBP3-203ENST00000371319 NAV2Q8IVL1 2488 aa13.68□□□□□ -0.22
SSBP3-203ENST00000371319 WI2-2373I1.2A0A1W2PRP0 233 aa13.68□□□□□ -0.22
SSBP3-203ENST00000371319 ZNF727A8MUV8 499 aa13.68□□□□□ -0.22
SSBP3-203ENST00000371319 BLCAPP62952 87 aa13.68□□□□□ -0.22
SSBP3-203ENST00000371319 OR51G1Q8NGK1 321 aa13.68□□□□□ -0.22
SSBP3-203ENST00000371319 ZNF502Q8TBZ5 544 aa13.68□□□□□ -0.22
SSBP3-203ENST00000371319 RPUSD4Q96CM3 377 aaKnown RBP13.68□□□□□ -0.22
SSBP3-203ENST00000371319 FOXC2Q99958 501 aa13.68□□□□□ -0.22
SSBP3-203ENST00000371319 PAXXQ9BUH6 204 aa13.68□□□□□ -0.22
SSBP3-203ENST00000371319 PARLQ9H300 379 aa13.68□□□□□ -0.22
SSBP3-203ENST00000371319 SDF2L1Q9HCN8 221 aa13.68□□□□□ -0.22
SSBP3-203ENST00000371319 HIGD1AQ9Y241 93 aa13.68□□□□□ -0.22
SSBP3-203ENST00000371319 CELSR1Q9NYQ6 3014 aa13.68□□□□□ -0.22
SSBP3-203ENST00000371319 PYYP10082 97 aa13.67□□□□□ -0.22
SSBP3-203ENST00000371319 ZNF674Q2M3X9 581 aa13.67□□□□□ -0.22
SSBP3-203ENST00000371319 C15orf32Q32M92 178 aa13.67□□□□□ -0.22
SSBP3-203ENST00000371319 Q6ZS46 218 aa13.67□□□□□ -0.22
SSBP3-203ENST00000371319 ZNF491Q8N8L2 437 aa13.67□□□□□ -0.22
SSBP3-203ENST00000371319 FXYD5Q96DB9 178 aa13.67□□□□□ -0.22
SSBP3-203ENST00000371319 SMIM7Q9BQ49 75 aa13.67□□□□□ -0.22
SSBP3-203ENST00000371319 OR51M1Q9H341 326 aa13.67□□□□□ -0.22
SSBP3-203ENST00000371319 LINC00527Q9UJ94 153 aa13.67□□□□□ -0.22
SSBP3-203ENST00000371319 SVEP1Q4LDE5 3571 aa13.67□□□□□ -0.22
SSBP3-203ENST00000371319 UBE2L3P68036 154 aaKnown RBP13.66□□□□□ -0.22
SSBP3-203ENST00000371319 NECAP1Q8NC96 275 aa13.66□□□□□ -0.22
SSBP3-203ENST00000371319 ZNF414Q96IQ9 312 aa13.66□□□□□ -0.22
SSBP3-203ENST00000371319 NBPF19A0A087WUL8 3843 aa13.66□□□□□ -0.22
SSBP3-203ENST00000371319 SCO2A0A1W2PP80 73 aa13.66□□□□□ -0.22
SSBP3-203ENST00000371319 OR2T8A6NH00 312 aa13.66□□□□□ -0.22
SSBP3-203ENST00000371319 SMAD7O15105 426 aaKnown RBP13.66□□□□□ -0.22
SSBP3-203ENST00000371319 CTSGP08311 255 aa13.66□□□□□ -0.22
SSBP3-203ENST00000371319 Q6YL49 198 aa13.66□□□□□ -0.22
SSBP3-203ENST00000371319 MS4A10Q96PG2 267 aa13.66□□□□□ -0.22
SSBP3-203ENST00000371319 SLC25A39Q9BZJ4 359 aaPredicted RBP13.66□□□□□ -0.22
SSBP3-203ENST00000371319 NAT8Q9UHE5 227 aa13.66□□□□□ -0.22
SSBP3-203ENST00000371319 A0A1W2PRE2 83 aa13.65□□□□□ -0.22
SSBP3-203ENST00000371319 OR2C1O95371 312 aa13.65□□□□□ -0.22
SSBP3-203ENST00000371319 GP9P14770 177 aa13.65□□□□□ -0.22
SSBP3-203ENST00000371319 OR5R1Q8NH85 324 aa13.65□□□□□ -0.22
SSBP3-203ENST00000371319 C11orf52Q96A22 123 aa13.65□□□□□ -0.22
SSBP3-203ENST00000371319 RNF125Q96EQ8 232 aa13.65□□□□□ -0.22
SSBP3-203ENST00000371319 CHRDL1Q9BU40 450 aa13.65□□□□□ -0.22
SSBP3-203ENST00000371319 PRDM13Q9H4Q3 707 aa13.65□□□□□ -0.22
SSBP3-203ENST00000371319 H3BRN7 92 aa13.64□□□□□ -0.23
SSBP3-203ENST00000371319 NDUFB4O95168 129 aa13.64□□□□□ -0.23
SSBP3-203ENST00000371319 IL4P05112 153 aa13.64□□□□□ -0.23
SSBP3-203ENST00000371319 PPIFP30405 207 aaKnown RBP13.64□□□□□ -0.23
SSBP3-203ENST00000371319 ADMP35318 185 aa13.64□□□□□ -0.23
SSBP3-203ENST00000371319 PNRC1Q12796 327 aaPredicted RBP13.64□□□□□ -0.23
SSBP3-203ENST00000371319 TMEM241Q24JQ0 296 aa13.64□□□□□ -0.23
SSBP3-203ENST00000371319 STXBP6Q8NFX7 210 aa13.64□□□□□ -0.23
SSBP3-203ENST00000371319 Q8WTZ3 238 aa13.64□□□□□ -0.23
SSBP3-203ENST00000371319 CCDC140Q96MF4 163 aa13.64□□□□□ -0.23
SSBP3-203ENST00000371319 NOL4LQ96MY1 436 aaPredicted RBP13.64□□□□□ -0.23
SSBP3-203ENST00000371319 SMCO4Q9NRQ5 59 aa13.64□□□□□ -0.23
SSBP3-203ENST00000371319 PDZD2O15018 2839 aa13.64□□□□□ -0.23
SSBP3-203ENST00000371319 CSMD1Q96PZ7 3565 aa13.64□□□□□ -0.23
SSBP3-203ENST00000371319 GGTLC3B5MD39 225 aa13.63□□□□□ -0.23
SSBP3-203ENST00000371319 BRI3O95415 125 aa13.63□□□□□ -0.23
SSBP3-203ENST00000371319 LEMD1Q68G75 181 aa13.63□□□□□ -0.23
SSBP3-203ENST00000371319 ZNF343Q6P1L6 599 aa13.63□□□□□ -0.23
SSBP3-203ENST00000371319 EEF1AKMT3Q96AZ1 226 aa13.63□□□□□ -0.23
SSBP3-203ENST00000371319 SHANK2-AS3Q9BTD1 123 aa13.63□□□□□ -0.23
SSBP3-203ENST00000371319 DERL1Q9BUN8 251 aa13.63□□□□□ -0.23
SSBP3-203ENST00000371319 TMA7Q9Y2S6 64 aaKnown RBP13.63□□□□□ -0.23
SSBP3-203ENST00000371319 HELZ2Q9BYK8 2649 aaKnown RBP13.63□□□□□ -0.23
SSBP3-203ENST00000371319 A0A087WWC5 75 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms