RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 SRSF12Q8WXF0 261 aaKnown RBP13.67□□□□□ -0.22
UBE3D-203ENST00000369747 MISP3Q96FF7 219 aa13.67□□□□□ -0.22
UBE3D-203ENST00000369747 ZNF48Q96MX3 618 aaPredicted RBP13.67□□□□□ -0.22
UBE3D-203ENST00000369747 NF1P21359 2839 aa13.67□□□□□ -0.22
UBE3D-203ENST00000369747 MOSP00540 346 aa13.66□□□□□ -0.22
UBE3D-203ENST00000369747 SRP14P37108 136 aaKnown RBP13.66□□□□□ -0.22
UBE3D-203ENST00000369747 MMDQ15546 238 aa13.66□□□□□ -0.22
UBE3D-203ENST00000369747 C16orf82Q7Z2V1 217 aa13.66□□□□□ -0.22
UBE3D-203ENST00000369747 SLC25A33Q9BSK2 321 aa13.66□□□□□ -0.22
UBE3D-203ENST00000369747 DOK5Q9P104 306 aa13.66□□□□□ -0.22
UBE3D-203ENST00000369747 PRELID1Q9Y255 219 aa13.66□□□□□ -0.22
UBE3D-203ENST00000369747 SCO2A0A1W2PP80 73 aa13.66□□□□□ -0.22
UBE3D-203ENST00000369747 FAM106CPP0CH98 169 aa13.66□□□□□ -0.22
UBE3D-203ENST00000369747 EBI3Q14213 229 aa13.66□□□□□ -0.22
UBE3D-203ENST00000369747 PLGLAQ15195 96 aa13.66□□□□□ -0.22
UBE3D-203ENST00000369747 ETFRF1Q6IPR1 90 aa13.66□□□□□ -0.22
UBE3D-203ENST00000369747 OR2T10Q8NGZ9 312 aa13.66□□□□□ -0.22
UBE3D-203ENST00000369747 DMRT1Q9Y5R6 373 aa13.66□□□□□ -0.22
UBE3D-203ENST00000369747 F11RQ9Y624 299 aaKnown RBP13.66□□□□□ -0.22
UBE3D-203ENST00000369747 NIPBLQ6KC79 2804 aaeCLIP13.65□□□□□ -0.22
UBE3D-203ENST00000369747 H3BUX3 64 aa13.65□□□□□ -0.22
UBE3D-203ENST00000369747 NBR2O15453 112 aa13.65□□□□□ -0.22
UBE3D-203ENST00000369747 RPS10P46783 165 aaKnown RBP13.65□□□□□ -0.22
UBE3D-203ENST00000369747 PQLC2Q6ZP29 291 aa13.65□□□□□ -0.22
UBE3D-203ENST00000369747 TMEM219Q86XT9 240 aa13.65□□□□□ -0.22
UBE3D-203ENST00000369747 Q8N6K4 173 aa13.65□□□□□ -0.22
UBE3D-203ENST00000369747 NPBQ8NG41 125 aa13.65□□□□□ -0.22
UBE3D-203ENST00000369747 MRPL32Q9BYC8 188 aaKnown RBP13.65□□□□□ -0.22
UBE3D-203ENST00000369747 DNAJC4Q9NNZ3 241 aa13.65□□□□□ -0.22
UBE3D-203ENST00000369747 TMEM167BQ9NRX6 74 aa13.65□□□□□ -0.22
UBE3D-203ENST00000369747 ARL2-SNX15V9GYD0 113 aa13.65□□□□□ -0.22
UBE3D-203ENST00000369747 NDUFA3O95167 84 aa13.64□□□□□ -0.23
UBE3D-203ENST00000369747 C8orf88P0DMB2 117 aa13.64□□□□□ -0.23
UBE3D-203ENST00000369747 TMEM11P17152 192 aa13.64□□□□□ -0.23
UBE3D-203ENST00000369747 TAS2R45P59539 299 aa13.64□□□□□ -0.23
UBE3D-203ENST00000369747 MORN5Q5VZ52 161 aa13.64□□□□□ -0.23
UBE3D-203ENST00000369747 TEX29Q8N6K0 151 aa13.64□□□□□ -0.23
UBE3D-203ENST00000369747 IGHV4-59P01825 116 aa13.64□□□□□ -0.23
UBE3D-203ENST00000369747 SELENOTP62341 195 aa13.64□□□□□ -0.23
UBE3D-203ENST00000369747 PATE2Q6UY27 113 aa13.64□□□□□ -0.23
UBE3D-203ENST00000369747 LINC01551Q86U37 167 aa13.64□□□□□ -0.23
UBE3D-203ENST00000369747 TMEM116Q8NCL8 245 aa13.64□□□□□ -0.23
UBE3D-203ENST00000369747 FAM167A-AS1Q96KT0 104 aa13.64□□□□□ -0.23
UBE3D-203ENST00000369747 RNF2Q99496 336 aa13.64□□□□□ -0.23
UBE3D-203ENST00000369747 TMEM160Q9NX00 188 aa13.64□□□□□ -0.23
UBE3D-203ENST00000369747 TEP1Q99973 2627 aaKnown RBP13.64□□□□□ -0.23
UBE3D-203ENST00000369747 TRBV20OR9-2A0A075B6H5 130 aa13.63□□□□□ -0.23
UBE3D-203ENST00000369747 CORTO00230 105 aa13.63□□□□□ -0.23
UBE3D-203ENST00000369747 OR7C2O60412 319 aa13.63□□□□□ -0.23
UBE3D-203ENST00000369747 HNF1AP20823 631 aa13.63□□□□□ -0.23
UBE3D-203ENST00000369747 LY6EQ16553 131 aa13.63□□□□□ -0.23
UBE3D-203ENST00000369747 C11orf52Q96A22 123 aa13.63□□□□□ -0.23
UBE3D-203ENST00000369747 SRSF8Q9BRL6 282 aaKnown RBP13.63□□□□□ -0.23
UBE3D-203ENST00000369747 SLC25A2Q9BXI2 301 aa13.63□□□□□ -0.23
UBE3D-203ENST00000369747 IGHV3-21A0A0B4J1V1 117 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 TRAV5A0A0B4J249 113 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 NCBP2LA6PVI3 153 aaKnown RBP13.62□□□□□ -0.23
UBE3D-203ENST00000369747 COX7A2P2O60397 106 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 SNRPEP62304 92 aaKnown RBP13.62□□□□□ -0.23
UBE3D-203ENST00000369747 OR4X1Q8NH49 305 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 ANAPC16Q96DE5 110 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 PFDN5Q99471 154 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 TNFRSF19Q9NS68 423 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 FN1P02751 2386 aaKnown RBP13.62□□□□□ -0.23
UBE3D-203ENST00000369747 TRBV24-1A0A075B6N3 115 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 PGPEP1LA6NFU8 196 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 C5orf52A6NGY3 159 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 INAFM1C9JVW0 142 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 CNIH1O95406 144 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 PFN1P07737 140 aaKnown RBP13.62□□□□□ -0.23
UBE3D-203ENST00000369747 OR10J4P0C629 311 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 IER3P46695 156 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 C10orf113Q5VZT2 155 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 Q6YL49 198 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 OR5T1Q8NG75 326 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 OR1L4Q8NGR5 311 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 FAM210BQ96KR6 192 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 TRGV9Q99603 122 aa13.62□□□□□ -0.23
UBE3D-203ENST00000369747 AURKAIP1Q9NWT8 199 aaPredicted RBP13.62□□□□□ -0.23
UBE3D-203ENST00000369747 H7BYZ3 331 aa13.61□□□□□ -0.23
UBE3D-203ENST00000369747 TSPAN9O75954 239 aa13.61□□□□□ -0.23
UBE3D-203ENST00000369747 SIGLECL1Q8N7X8 197 aa13.61□□□□□ -0.23
UBE3D-203ENST00000369747 UHRF2Q96PU4 802 aa13.61□□□□□ -0.23
UBE3D-203ENST00000369747 C5orf64Q2M2E5 130 aa13.6□□□□□ -0.23
UBE3D-203ENST00000369747 OR5AU1Q8NGC0 362 aa13.6□□□□□ -0.23
UBE3D-203ENST00000369747 WNT10AQ9GZT5 417 aa13.6□□□□□ -0.23
UBE3D-203ENST00000369747 PRDM13Q9H4Q3 707 aa13.6□□□□□ -0.23
UBE3D-203ENST00000369747 ZNF355PQ9NSJ1 428 aa13.6□□□□□ -0.23
UBE3D-203ENST00000369747 I3L2K1 104 aa13.6□□□□□ -0.23
UBE3D-203ENST00000369747 HOXA3O43365 443 aaPredicted RBP13.6□□□□□ -0.23
UBE3D-203ENST00000369747 S100A6P06703 90 aa13.6□□□□□ -0.23
UBE3D-203ENST00000369747 GALR1P47211 349 aa13.6□□□□□ -0.23
UBE3D-203ENST00000369747 NECAP1Q8NC96 275 aa13.6□□□□□ -0.23
UBE3D-203ENST00000369747 ELOVL1Q9BW60 279 aa13.6□□□□□ -0.23
UBE3D-203ENST00000369747 CDC42EP3Q9UKI2 254 aa13.6□□□□□ -0.23
UBE3D-203ENST00000369747 A6NDX4 124 aa13.59□□□□□ -0.23
UBE3D-203ENST00000369747 GGTLC3B5MD39 225 aa13.59□□□□□ -0.23
UBE3D-203ENST00000369747 FXYD3Q14802 87 aa13.59□□□□□ -0.23
UBE3D-203ENST00000369747 Q8N9W7 124 aa13.59□□□□□ -0.23
UBE3D-203ENST00000369747 RBM14Q96PK6 669 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms