RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 TMEM42Q69YG0 159 aa17.31■□□□□ 0.36
SMURF1-201ENST00000361125 COPS9Q8WXC6 57 aa17.31■□□□□ 0.36
SMURF1-201ENST00000361125 ASCL2Q99929 193 aa17.3■□□□□ 0.36
SMURF1-201ENST00000361125 C15orf32Q32M92 178 aa17.3■□□□□ 0.36
SMURF1-201ENST00000361125 SLC25A48Q6ZT89 311 aaKnown RBP17.3■□□□□ 0.36
SMURF1-201ENST00000361125 SDK2Q58EX2 2172 aa17.3■□□□□ 0.36
SMURF1-201ENST00000361125 C19orf67A6NJJ6 358 aa17.3■□□□□ 0.36
SMURF1-201ENST00000361125 CA1P00915 261 aaPredicted RBP17.3■□□□□ 0.36
SMURF1-201ENST00000361125 OR5AN1Q8NGI8 311 aa17.3■□□□□ 0.36
SMURF1-201ENST00000361125 COQ2Q96H96 371 aa17.3■□□□□ 0.36
SMURF1-201ENST00000361125 TCF20Q9UGU0 1960 aaKnown RBP17.3■□□□□ 0.36
SMURF1-201ENST00000361125 LINC00473A8K010 186 aa17.3■□□□□ 0.36
SMURF1-201ENST00000361125 ST6GALNAC3Q8NDV1 305 aa17.3■□□□□ 0.36
SMURF1-201ENST00000361125 ATP5LO75964 103 aa17.29■□□□□ 0.36
SMURF1-201ENST00000361125 ZNF257Q9Y2Q1 563 aa17.29■□□□□ 0.36
SMURF1-201ENST00000361125 IGKV2-40A0A087WW87 121 aaPredicted RBP17.29■□□□□ 0.36
SMURF1-201ENST00000361125 A0A1W2PRE2 83 aa17.29■□□□□ 0.36
SMURF1-201ENST00000361125 IGKV2D-40P01614 121 aaPredicted RBP17.29■□□□□ 0.36
SMURF1-201ENST00000361125 AMBPP02760 352 aa17.29■□□□□ 0.36
SMURF1-201ENST00000361125 MST1LQ2TV78 715 aa17.29■□□□□ 0.36
SMURF1-201ENST00000361125 FAM186AA6NE01 2351 aa17.29■□□□□ 0.36
SMURF1-201ENST00000361125 H0YJW9 148 aa17.29■□□□□ 0.36
SMURF1-201ENST00000361125 GGTLC1Q9BX51 225 aa17.29■□□□□ 0.36
SMURF1-201ENST00000361125 IGKV3D-20A0A0C4DH25 116 aa17.28■□□□□ 0.36
SMURF1-201ENST00000361125 DSCR9P59020 149 aa17.28■□□□□ 0.36
SMURF1-201ENST00000361125 KLF17Q5JT82 389 aaPredicted RBP17.28■□□□□ 0.36
SMURF1-201ENST00000361125 APC2O95996 2303 aa17.28■□□□□ 0.36
SMURF1-201ENST00000361125 SMIM13P0DJ93 91 aa17.28■□□□□ 0.36
SMURF1-201ENST00000361125 TEX38Q6PEX7 206 aa17.28■□□□□ 0.36
SMURF1-201ENST00000361125 MGST2Q99735 147 aa17.28■□□□□ 0.36
SMURF1-201ENST00000361125 TICRRQ7Z2Z1 1910 aa17.28■□□□□ 0.36
SMURF1-201ENST00000361125 EVI2AP22794 236 aa17.28■□□□□ 0.36
SMURF1-201ENST00000361125 CRIM1Q9NZV1 1036 aa17.28■□□□□ 0.36
SMURF1-201ENST00000361125 TOMM7Q9P0U1 55 aa17.28■□□□□ 0.36
SMURF1-201ENST00000361125 LY6G6EA0A0G2JKS1 128 aa17.28■□□□□ 0.36
SMURF1-201ENST00000361125 PSMG4Q5JS54 123 aa17.28■□□□□ 0.36
SMURF1-201ENST00000361125 PRR31Q5SQ13 230 aa17.28■□□□□ 0.36
SMURF1-201ENST00000361125 SCRT1Q9BWW7 348 aa17.28■□□□□ 0.36
SMURF1-201ENST00000361125 U3KQA8 63 aa17.28■□□□□ 0.36
SMURF1-201ENST00000361125 C3orf36Q3SXR2 165 aa17.28■□□□□ 0.36
SMURF1-201ENST00000361125 PSG1P11464 419 aa17.27■□□□□ 0.36
SMURF1-201ENST00000361125 PCP4P48539 62 aa17.27■□□□□ 0.36
SMURF1-201ENST00000361125 SAMD13Q5VXD3 122 aa17.27■□□□□ 0.36
SMURF1-201ENST00000361125 C20orf204Q6ZNR8 217 aa17.27■□□□□ 0.36
SMURF1-201ENST00000361125 BUB1B-PAK6H3BSN5 160 aa17.27■□□□□ 0.35
SMURF1-201ENST00000361125 CACNA1EQ15878 2313 aa17.27■□□□□ 0.35
SMURF1-201ENST00000361125 TRAV21A0A0B4J279 112 aa17.27■□□□□ 0.35
SMURF1-201ENST00000361125 OSTCQ9NRP0 149 aa17.27■□□□□ 0.35
SMURF1-201ENST00000361125 PMS2P5A8MQ11 134 aa17.26■□□□□ 0.35
SMURF1-201ENST00000361125 EXOC3-AS1Q8N2X6 119 aa17.26■□□□□ 0.35
SMURF1-201ENST00000361125 GZMBP10144 247 aa17.26■□□□□ 0.35
SMURF1-201ENST00000361125 RPP25LQ8N5L8 163 aaKnown RBP17.26■□□□□ 0.35
SMURF1-201ENST00000361125 JMJD8Q96S16 334 aa17.26■□□□□ 0.35
SMURF1-201ENST00000361125 ST20Q9HBF5 79 aa17.26■□□□□ 0.35
SMURF1-201ENST00000361125 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.26■□□□□ 0.35
SMURF1-201ENST00000361125 H3BUX3 64 aa17.26■□□□□ 0.35
SMURF1-201ENST00000361125 FOXL2NBQ6ZUU3 175 aa17.26■□□□□ 0.35
SMURF1-201ENST00000361125 PEF1Q9UBV8 284 aaKnown RBP17.26■□□□□ 0.35
SMURF1-201ENST00000361125 WISP1O95388 367 aa17.25■□□□□ 0.35
SMURF1-201ENST00000361125 RPRMLQ8N4K4 120 aa17.25■□□□□ 0.35
SMURF1-201ENST00000361125 PRDM13Q9H4Q3 707 aa17.25■□□□□ 0.35
SMURF1-201ENST00000361125 ASXL3Q9C0F0 2248 aa17.25■□□□□ 0.35
SMURF1-201ENST00000361125 GNB1LQ9BYB4 327 aa17.25■□□□□ 0.35
SMURF1-201ENST00000361125 DUSP14O95147 198 aaKnown RBP17.25■□□□□ 0.35
SMURF1-201ENST00000361125 HS3ST6Q96QI5 342 aa17.25■□□□□ 0.35
SMURF1-201ENST00000361125 NPIPB5A8MRT5 1133 aa17.24■□□□□ 0.35
SMURF1-201ENST00000361125 NDPQ00604 133 aa17.24■□□□□ 0.35
SMURF1-201ENST00000361125 SLC25A39Q9BZJ4 359 aaPredicted RBP17.24■□□□□ 0.35
SMURF1-201ENST00000361125 JKAMPQ9P055 326 aa17.24■□□□□ 0.35
SMURF1-201ENST00000361125 E7EQL1 145 aa17.24■□□□□ 0.35
SMURF1-201ENST00000361125 SEPSECSQ9HD40 501 aaKnown RBP17.24■□□□□ 0.35
SMURF1-201ENST00000361125 CLDN16Q9Y5I7 305 aa17.24■□□□□ 0.35
SMURF1-201ENST00000361125 LAMTOR2Q9Y2Q5 125 aa17.24■□□□□ 0.35
SMURF1-201ENST00000361125 C9JQL5 133 aa17.24■□□□□ 0.35
SMURF1-201ENST00000361125 MRPL16Q9NX20 251 aaKnown RBP17.24■□□□□ 0.35
SMURF1-201ENST00000361125 TMEM14EPQ6UXP3 125 aa17.23■□□□□ 0.35
SMURF1-201ENST00000361125 SCGB1A1P11684 91 aa17.23■□□□□ 0.35
SMURF1-201ENST00000361125 MINOS1Q5TGZ0 78 aa17.23■□□□□ 0.35
SMURF1-201ENST00000361125 MINOS1-NBL1R4GNA1 71 aa17.23■□□□□ 0.35
SMURF1-201ENST00000361125 MRPS16Q9Y3D3 137 aaKnown RBP17.23■□□□□ 0.35
SMURF1-201ENST00000361125 TDGF1P13385 188 aa17.22■□□□□ 0.35
SMURF1-201ENST00000361125 ZNRD1Q9P1U0 126 aa17.22■□□□□ 0.35
SMURF1-201ENST00000361125 B4DSR2 109 aa17.22■□□□□ 0.35
SMURF1-201ENST00000361125 H3BRM9 83 aa17.22■□□□□ 0.35
SMURF1-201ENST00000361125 STAG3L3P0CL85 134 aa17.22■□□□□ 0.35
SMURF1-201ENST00000361125 MSRB2Q9Y3D2 182 aa17.22■□□□□ 0.35
SMURF1-201ENST00000361125 PYY3Q5JQD4 70 aa17.22■□□□□ 0.35
SMURF1-201ENST00000361125 DERL1Q9BUN8 251 aa17.22■□□□□ 0.35
SMURF1-201ENST00000361125 NUDT10Q8NFP7 164 aa17.22■□□□□ 0.35
SMURF1-201ENST00000361125 NUDT11Q96G61 164 aa17.22■□□□□ 0.35
SMURF1-201ENST00000361125 BPESC1Q9GZL8 116 aa17.22■□□□□ 0.35
SMURF1-201ENST00000361125 M0R1W7 72 aa17.21■□□□□ 0.35
SMURF1-201ENST00000361125 SAP30O75446 220 aa17.21■□□□□ 0.35
SMURF1-201ENST00000361125 LINC01551Q86U37 167 aa17.21■□□□□ 0.35
SMURF1-201ENST00000361125 TRBV6-6A0A0A6YYG2 114 aa17.21■□□□□ 0.35
SMURF1-201ENST00000361125 A0A0G2JRQ6 117 aa17.21■□□□□ 0.35
SMURF1-201ENST00000361125 AGMATQ9BSE5 352 aa17.21■□□□□ 0.35
SMURF1-201ENST00000361125 A0A1B0GWJ7 208 aa17.21■□□□□ 0.35
SMURF1-201ENST00000361125 PLXNA4Q9HCM2 1894 aa17.21■□□□□ 0.35
SMURF1-201ENST00000361125 ACTL10Q5JWF8 245 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms