RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 ARPC5O15511 151 aa10.71□□□□□ -0.69
APOBEC3B-202ENST00000335760 IL4P05112 153 aa10.71□□□□□ -0.69
APOBEC3B-202ENST00000335760 FOLR2P14207 255 aa10.71□□□□□ -0.69
APOBEC3B-202ENST00000335760 GATA2P23769 480 aaPredicted RBP10.71□□□□□ -0.69
APOBEC3B-202ENST00000335760 AP2S1P53680 142 aaPredicted RBP10.71□□□□□ -0.69
APOBEC3B-202ENST00000335760 ELLP55199 621 aaPredicted RBP10.71□□□□□ -0.69
APOBEC3B-202ENST00000335760 C9orf66Q5T8R8 295 aa10.71□□□□□ -0.69
APOBEC3B-202ENST00000335760 BTNL8Q6UX41 500 aa10.71□□□□□ -0.69
APOBEC3B-202ENST00000335760 TMEM182Q6ZP80 229 aaPredicted RBP10.71□□□□□ -0.69
APOBEC3B-202ENST00000335760 OR11H4Q8NGC9 324 aa10.71□□□□□ -0.69
APOBEC3B-202ENST00000335760 ATP5SQ99766 215 aa10.71□□□□□ -0.69
APOBEC3B-202ENST00000335760 GINS3Q9BRX5 216 aa10.71□□□□□ -0.69
APOBEC3B-202ENST00000335760 DAZ1Q9NQZ3 744 aaKnown RBP10.71□□□□□ -0.69
APOBEC3B-202ENST00000335760 WI2-2373I1.2A0A1W2PRP0 233 aa10.7□□□□□ -0.7
APOBEC3B-202ENST00000335760 RNF222A6NCQ9 220 aa10.7□□□□□ -0.7
APOBEC3B-202ENST00000335760 AGPAT2O15120 278 aa10.7□□□□□ -0.7
APOBEC3B-202ENST00000335760 DFFBO76075 338 aa10.7□□□□□ -0.7
APOBEC3B-202ENST00000335760 FGF7P21781 194 aa10.7□□□□□ -0.7
APOBEC3B-202ENST00000335760 CBLN1P23435 193 aa10.7□□□□□ -0.7
APOBEC3B-202ENST00000335760 RAB31Q13636 194 aa10.7□□□□□ -0.7
APOBEC3B-202ENST00000335760 OXLD1Q5BKU9 147 aa10.7□□□□□ -0.7
APOBEC3B-202ENST00000335760 ADAMTSL5Q6ZMM2 481 aa10.7□□□□□ -0.7
APOBEC3B-202ENST00000335760 BPIFCQ8NFQ6 507 aa10.7□□□□□ -0.7
APOBEC3B-202ENST00000335760 MGST2Q99735 147 aa10.7□□□□□ -0.7
APOBEC3B-202ENST00000335760 WFDC1Q9HC57 220 aa10.7□□□□□ -0.7
APOBEC3B-202ENST00000335760 FBXL17Q9UF56 701 aa10.7□□□□□ -0.7
APOBEC3B-202ENST00000335760 IGHV3-49A0A0A0MS15 119 aa10.69□□□□□ -0.7
APOBEC3B-202ENST00000335760 CAMLGP49069 296 aa10.69□□□□□ -0.7
APOBEC3B-202ENST00000335760 LYZP61626 148 aa10.69□□□□□ -0.7
APOBEC3B-202ENST00000335760 SELENOTP62341 195 aa10.69□□□□□ -0.7
APOBEC3B-202ENST00000335760 USF2Q15853 346 aaPredicted RBP10.69□□□□□ -0.7
APOBEC3B-202ENST00000335760 MARC2Q969Z3 335 aa10.69□□□□□ -0.7
APOBEC3B-202ENST00000335760 RNF125Q96EQ8 232 aa10.69□□□□□ -0.7
APOBEC3B-202ENST00000335760 METTL26Q96S19 204 aa10.69□□□□□ -0.7
APOBEC3B-202ENST00000335760 PBDC1Q9BVG4 233 aa10.69□□□□□ -0.7
APOBEC3B-202ENST00000335760 GPR61Q9BZJ8 451 aa10.69□□□□□ -0.7
APOBEC3B-202ENST00000335760 MFFQ9GZY8 342 aa10.69□□□□□ -0.7
APOBEC3B-202ENST00000335760 SIGLEC8Q9NYZ4 499 aa10.69□□□□□ -0.7
APOBEC3B-202ENST00000335760 MRPL27Q9P0M9 148 aaKnown RBP10.69□□□□□ -0.7
APOBEC3B-202ENST00000335760 SLC45A2Q9UMX9 530 aa10.69□□□□□ -0.7
APOBEC3B-202ENST00000335760 IGHV7-4-1A0A0J9YVY3 117 aa10.68□□□□□ -0.7
APOBEC3B-202ENST00000335760 G3V4G9 280 aa10.68□□□□□ -0.7
APOBEC3B-202ENST00000335760 MPDU1O75352 247 aa10.68□□□□□ -0.7
APOBEC3B-202ENST00000335760 CFDP00746 253 aaPredicted RBP10.68□□□□□ -0.7
APOBEC3B-202ENST00000335760 IFNA5P01569 189 aa10.68□□□□□ -0.7
APOBEC3B-202ENST00000335760 C8orf88P0DMB2 117 aa10.68□□□□□ -0.7
APOBEC3B-202ENST00000335760 NPPCP23582 126 aa10.68□□□□□ -0.7
APOBEC3B-202ENST00000335760 INSL3P51460 131 aa10.68□□□□□ -0.7
APOBEC3B-202ENST00000335760 SCGB1C1Q8TD33 95 aa10.68□□□□□ -0.7
APOBEC3B-202ENST00000335760 DYNLRB2Q8TF09 96 aa10.68□□□□□ -0.7
APOBEC3B-202ENST00000335760 GGTLC1Q9BX51 225 aa10.68□□□□□ -0.7
APOBEC3B-202ENST00000335760 WDR61Q9GZS3 305 aaKnown RBP10.68□□□□□ -0.7
APOBEC3B-202ENST00000335760 SMPXQ9UHP9 88 aa10.68□□□□□ -0.7
APOBEC3B-202ENST00000335760 RABAC1Q9UI14 185 aa10.68□□□□□ -0.7
APOBEC3B-202ENST00000335760 SELENOKQ9Y6D0 94 aa10.68□□□□□ -0.7
APOBEC3B-202ENST00000335760 HMSDA8MTL9 139 aa10.67□□□□□ -0.7
APOBEC3B-202ENST00000335760 APOHP02749 345 aaPredicted RBP10.67□□□□□ -0.7
APOBEC3B-202ENST00000335760 ORM2P19652 201 aa10.67□□□□□ -0.7
APOBEC3B-202ENST00000335760 CD300CQ08708 224 aa10.67□□□□□ -0.7
APOBEC3B-202ENST00000335760 NPCDR1Q9BY65 106 aa10.67□□□□□ -0.7
APOBEC3B-202ENST00000335760 MLXQ9UH92 298 aa10.67□□□□□ -0.7
APOBEC3B-202ENST00000335760 PKD1L1Q8TDX9 2849 aa10.67□□□□□ -0.7
APOBEC3B-202ENST00000335760 IGHV3OR16-13A0A075B7E8 117 aa10.66□□□□□ -0.7
APOBEC3B-202ENST00000335760 IGHV3-74A0A0B4J1X5 117 aa10.66□□□□□ -0.7
APOBEC3B-202ENST00000335760 IGHV3-66A0A0C4DH42 116 aa10.66□□□□□ -0.7
APOBEC3B-202ENST00000335760 C1QBP02746 253 aa10.66□□□□□ -0.7
APOBEC3B-202ENST00000335760 HNRNPCP07910 306 aaKnown RBP eCLIP10.66□□□□□ -0.7
APOBEC3B-202ENST00000335760 LINC00869P0C866 280 aa10.66□□□□□ -0.7
APOBEC3B-202ENST00000335760 CRYBB3P26998 211 aa10.66□□□□□ -0.7
APOBEC3B-202ENST00000335760 OPCMLQ14982 345 aa10.66□□□□□ -0.7
APOBEC3B-202ENST00000335760 SAMD5Q5TGI4 173 aa10.66□□□□□ -0.7
APOBEC3B-202ENST00000335760 MIC13Q5XKP0 118 aa10.66□□□□□ -0.7
APOBEC3B-202ENST00000335760 STPG3Q8N7X2 389 aa10.66□□□□□ -0.7
APOBEC3B-202ENST00000335760 OR1B1Q8NGR6 318 aa10.66□□□□□ -0.7
APOBEC3B-202ENST00000335760 RHPN1-AS1Q9BWJ2 59 aa10.66□□□□□ -0.7
APOBEC3B-202ENST00000335760 TECRQ9NZ01 308 aaKnown RBP10.66□□□□□ -0.7
APOBEC3B-202ENST00000335760 DOK5Q9P104 306 aa10.66□□□□□ -0.7
APOBEC3B-202ENST00000335760 CHEK1O14757 476 aa10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 IGLV1-51P01701 117 aa10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 CXCL2P19875 107 aa10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 RPL29P47914 159 aaKnown RBP10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 EIF2B2P49770 351 aaKnown RBP10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 PRR20EP86478 221 aa10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 PRR20CP86479 221 aa10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 PRR20DP86480 221 aa10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 PRR20BP86481 221 aa10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 PRR20AP86496 221 aa10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 ZNF266Q14584 549 aa10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 DEFB114Q30KQ6 69 aa10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 KCNRGQ8N5I3 272 aa10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 ZNF709Q8N972 641 aa10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 ST8SIA2Q92186 375 aa10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 PPP1R14BQ96C90 147 aa10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 NARS2Q96I59 477 aaKnown RBP10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 NEURL2Q9BR09 285 aa10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 PARD6GQ9BYG4 376 aaPredicted RBP10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 ARL6Q9H0F7 186 aa10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 PXMP4Q9Y6I8 212 aa10.65□□□□□ -0.7
APOBEC3B-202ENST00000335760 A0A1W2PS18 150 aa10.65□□□□□ -0.71
APOBEC3B-202ENST00000335760 C17orf112F2Z3M2 114 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms