RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 LYZP61626 148 aa16.71■□□□□ 0.27
ATG4D-201ENST00000309469 LINC01551Q86U37 167 aa16.71■□□□□ 0.27
ATG4D-201ENST00000309469 LINC01356Q8N9X3 169 aa16.71■□□□□ 0.27
ATG4D-201ENST00000309469 FXYD5Q96DB9 178 aa16.71■□□□□ 0.27
ATG4D-201ENST00000309469 S4R3C0 116 aa16.71■□□□□ 0.27
ATG4D-201ENST00000309469 TRAV30A0A087WSZ9 112 aa16.7■□□□□ 0.26
ATG4D-201ENST00000309469 ATP6V0E1O15342 81 aa16.7■□□□□ 0.26
ATG4D-201ENST00000309469 NDUFB8O95169 186 aa16.7■□□□□ 0.26
ATG4D-201ENST00000309469 SUMO1P63165 101 aaKnown RBP16.7■□□□□ 0.26
ATG4D-201ENST00000309469 TMEM219Q86XT9 240 aa16.7■□□□□ 0.26
ATG4D-201ENST00000309469 ANAPC16Q96DE5 110 aa16.7■□□□□ 0.26
ATG4D-201ENST00000309469 ZNF48Q96MX3 618 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-201ENST00000309469 TMUB1Q9BVT8 246 aa16.7■□□□□ 0.26
ATG4D-201ENST00000309469 HIGD1AQ9Y241 93 aa16.7■□□□□ 0.26
ATG4D-201ENST00000309469 CRYBG3Q68DQ2 2970 aa16.7■□□□□ 0.26
ATG4D-201ENST00000309469 TRBV20OR9-2A0A075B6H5 130 aa16.7■□□□□ 0.26
ATG4D-201ENST00000309469 H7BYZ3 331 aa16.7■□□□□ 0.26
ATG4D-201ENST00000309469 OR2J3O76001 311 aa16.7■□□□□ 0.26
ATG4D-201ENST00000309469 UNQ5815/PRO19632Q6UWF5 114 aa16.7■□□□□ 0.26
ATG4D-201ENST00000309469 FAM110DQ8TAY7 271 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-201ENST00000309469 MOB4Q9Y3A3 225 aa16.7■□□□□ 0.26
ATG4D-201ENST00000309469 SOX21Q9Y651 276 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-201ENST00000309469 LRRK2Q5S007 2527 aa16.7■□□□□ 0.26
ATG4D-201ENST00000309469 FAM208BQ5VWN6 2430 aa16.69■□□□□ 0.26
ATG4D-201ENST00000309469 SH2D7A6NKC9 451 aaPredicted RBP16.69■□□□□ 0.26
ATG4D-201ENST00000309469 GNG7O60262 68 aa16.69■□□□□ 0.26
ATG4D-201ENST00000309469 AVPP01185 164 aa16.69■□□□□ 0.26
ATG4D-201ENST00000309469 S100A6P06703 90 aa16.69■□□□□ 0.26
ATG4D-201ENST00000309469 CRYBB3P26998 211 aa16.69■□□□□ 0.26
ATG4D-201ENST00000309469 BEX4Q9NWD9 120 aaPredicted RBP16.69■□□□□ 0.26
ATG4D-201ENST00000309469 C21orf62Q9NYP8 219 aa16.69■□□□□ 0.26
ATG4D-201ENST00000309469 FBN2P35556 2912 aa16.69■□□□□ 0.26
ATG4D-201ENST00000309469 TOMM40O96008 361 aa16.68■□□□□ 0.26
ATG4D-201ENST00000309469 HIST1H1BP16401 226 aaKnown RBP16.68■□□□□ 0.26
ATG4D-201ENST00000309469 ECSCRQ19T08 205 aa16.68■□□□□ 0.26
ATG4D-201ENST00000309469 FAM210BQ96KR6 192 aa16.68■□□□□ 0.26
ATG4D-201ENST00000309469 MRPL27Q9P0M9 148 aaKnown RBP16.68■□□□□ 0.26
ATG4D-201ENST00000309469 LINC01548A6NM66 108 aa16.68■□□□□ 0.26
ATG4D-201ENST00000309469 F8W735 103 aaPredicted RBP16.68■□□□□ 0.26
ATG4D-201ENST00000309469 YPEL3P61236 119 aaPredicted RBP16.68■□□□□ 0.26
ATG4D-201ENST00000309469 TMEM68Q96MH6 324 aa16.68■□□□□ 0.26
ATG4D-201ENST00000309469 AURKAIP1Q9NWT8 199 aaPredicted RBP16.68■□□□□ 0.26
ATG4D-201ENST00000309469 FBXL7Q9UJT9 491 aa16.68■□□□□ 0.26
ATG4D-201ENST00000309469 TRBV24-1A0A075B6N3 115 aa16.67■□□□□ 0.26
ATG4D-201ENST00000309469 PGPEP1LA6NFU8 196 aa16.67■□□□□ 0.26
ATG4D-201ENST00000309469 RPL35P42766 123 aaKnown RBP16.67■□□□□ 0.26
ATG4D-201ENST00000309469 KLK9Q2XQG4 91 aa16.67■□□□□ 0.26
ATG4D-201ENST00000309469 DEFB113Q30KQ7 82 aa16.67■□□□□ 0.26
ATG4D-201ENST00000309469 Q56UQ5 140 aa16.67■□□□□ 0.26
ATG4D-201ENST00000309469 OR5B12Q96R08 314 aa16.67■□□□□ 0.26
ATG4D-201ENST00000309469 KLK9Q9UKQ9 250 aa16.67■□□□□ 0.26
ATG4D-201ENST00000309469 S100PP25815 95 aa16.66■□□□□ 0.26
ATG4D-201ENST00000309469 GALR1P47211 349 aa16.66■□□□□ 0.26
ATG4D-201ENST00000309469 SNRPEP62304 92 aaKnown RBP16.66■□□□□ 0.26
ATG4D-201ENST00000309469 ELOVL1Q9BW60 279 aa16.66■□□□□ 0.26
ATG4D-201ENST00000309469 SLC25A39Q9BZJ4 359 aaPredicted RBP16.66■□□□□ 0.26
ATG4D-201ENST00000309469 VPS13CQ709C8 3753 aa16.66■□□□□ 0.26
ATG4D-201ENST00000309469 HELTA6NFD8 242 aa16.66■□□□□ 0.26
ATG4D-201ENST00000309469 C9JCJ5 164 aa16.66■□□□□ 0.26
ATG4D-201ENST00000309469 AMY1AP04745 511 aa16.66■□□□□ 0.26
ATG4D-201ENST00000309469 LOXL1Q08397 574 aaPredicted RBP16.66■□□□□ 0.26
ATG4D-201ENST00000309469 LEMD1Q68G75 181 aa16.66■□□□□ 0.26
ATG4D-201ENST00000309469 ZNF491Q8N8L2 437 aa16.66■□□□□ 0.26
ATG4D-201ENST00000309469 NECAP1Q8NC96 275 aa16.66■□□□□ 0.26
ATG4D-201ENST00000309469 OCC1Q8TAD7 63 aa16.66■□□□□ 0.26
ATG4D-201ENST00000309469 PFN1P07737 140 aaKnown RBP16.65■□□□□ 0.26
ATG4D-201ENST00000309469 CD99P14209 185 aa16.65■□□□□ 0.26
ATG4D-201ENST00000309469 GP9P14770 177 aa16.65■□□□□ 0.26
ATG4D-201ENST00000309469 LRRC75A-AS1Q8N1F1 130 aa16.65■□□□□ 0.26
ATG4D-201ENST00000309469 WI2-2373I1.2A0A1W2PRP0 233 aa16.64■□□□□ 0.26
ATG4D-201ENST00000309469 C5orf52A6NGY3 159 aa16.64■□□□□ 0.26
ATG4D-201ENST00000309469 G3V318 75 aa16.64■□□□□ 0.26
ATG4D-201ENST00000309469 IGHV3-23P01764 117 aa16.64■□□□□ 0.26
ATG4D-201ENST00000309469 SNRPCP09234 159 aaKnown RBP16.64■□□□□ 0.26
ATG4D-201ENST00000309469 NBEAP1P0C6P0 100 aa16.64■□□□□ 0.26
ATG4D-201ENST00000309469 VN1R17PQ8TDU5 208 aa16.64■□□□□ 0.26
ATG4D-201ENST00000309469 RNF125Q96EQ8 232 aa16.64■□□□□ 0.26
ATG4D-201ENST00000309469 TXN2Q99757 166 aa16.64■□□□□ 0.26
ATG4D-201ENST00000309469 LY96Q9Y6Y9 160 aa16.64■□□□□ 0.26
ATG4D-201ENST00000309469 RNF223E7ERA6 249 aa16.64■□□□□ 0.25
ATG4D-201ENST00000309469 IL4P05112 153 aa16.64■□□□□ 0.25
ATG4D-201ENST00000309469 ZNF329Q86UD4 541 aa16.64■□□□□ 0.25
ATG4D-201ENST00000309469 MAPK1IP1LQ8NDC0 245 aa16.64■□□□□ 0.25
ATG4D-201ENST00000309469 SVEP1Q4LDE5 3571 aa16.63■□□□□ 0.25
ATG4D-201ENST00000309469 A6NDX4 124 aa16.63■□□□□ 0.25
ATG4D-201ENST00000309469 H3BUX3 64 aa16.63■□□□□ 0.25
ATG4D-201ENST00000309469 J3QLI3 93 aa16.63■□□□□ 0.25
ATG4D-201ENST00000309469 TGOLN2O43493 480 aa16.63■□□□□ 0.25
ATG4D-201ENST00000309469 FCGR2BP31994 310 aaPredicted RBP16.63■□□□□ 0.25
ATG4D-201ENST00000309469 BLNKQ8WV28 456 aa16.63■□□□□ 0.25
ATG4D-201ENST00000309469 TMEM14CQ9P0S9 112 aa16.63■□□□□ 0.25
ATG4D-201ENST00000309469 TRBV9A0A0B4J1U6 114 aa16.62■□□□□ 0.25
ATG4D-201ENST00000309469 ZNF98A6NK75 572 aa16.62■□□□□ 0.25
ATG4D-201ENST00000309469 PPP1R2P9O14990 202 aa16.62■□□□□ 0.25
ATG4D-201ENST00000309469 TGFAP01135 160 aa16.62■□□□□ 0.25
ATG4D-201ENST00000309469 MYCNOSP40205 109 aa16.62■□□□□ 0.25
ATG4D-201ENST00000309469 AKR1D1P51857 326 aa16.62■□□□□ 0.25
ATG4D-201ENST00000309469 RANP62826 216 aaKnown RBP16.62■□□□□ 0.25
ATG4D-201ENST00000309469 LY6EQ16553 131 aa16.62■□□□□ 0.25
ATG4D-201ENST00000309469 SHANK2-AS3Q9BTD1 123 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms