RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 UBE2L5PA0A1B0GUS4 154 aa12.63□□□□□ -0.39
CHCHD3-201ENST00000262570 SAP30O75446 220 aa12.63□□□□□ -0.39
CHCHD3-201ENST00000262570 IL4P05112 153 aa12.63□□□□□ -0.39
CHCHD3-201ENST00000262570 EDN2P20800 178 aa12.63□□□□□ -0.39
CHCHD3-201ENST00000262570 CBLN1P23435 193 aa12.63□□□□□ -0.39
CHCHD3-201ENST00000262570 INSL3P51460 131 aa12.63□□□□□ -0.39
CHCHD3-201ENST00000262570 C9orf66Q5T8R8 295 aa12.63□□□□□ -0.39
CHCHD3-201ENST00000262570 CYP2G1PQ6ZSU1 146 aa12.63□□□□□ -0.39
CHCHD3-201ENST00000262570 AKAP14Q86UN6 197 aa12.63□□□□□ -0.39
CHCHD3-201ENST00000262570 GINS3Q9BRX5 216 aa12.63□□□□□ -0.39
CHCHD3-201ENST00000262570 WI2-2373I1.2A0A1W2PRP0 233 aa12.62□□□□□ -0.39
CHCHD3-201ENST00000262570 AGPAT2O15120 278 aa12.62□□□□□ -0.39
CHCHD3-201ENST00000262570 WIPF1O43516 503 aa12.62□□□□□ -0.39
CHCHD3-201ENST00000262570 ZNF207O43670 478 aaKnown RBP12.62□□□□□ -0.39
CHCHD3-201ENST00000262570 C8orf88P0DMB2 117 aa12.62□□□□□ -0.39
CHCHD3-201ENST00000262570 FOLR2P14207 255 aa12.62□□□□□ -0.39
CHCHD3-201ENST00000262570 GATA2P23769 480 aaPredicted RBP12.62□□□□□ -0.39
CHCHD3-201ENST00000262570 SELENOTP62341 195 aa12.62□□□□□ -0.39
CHCHD3-201ENST00000262570 OR2F1Q13607 317 aa12.62□□□□□ -0.39
CHCHD3-201ENST00000262570 OXLD1Q5BKU9 147 aa12.62□□□□□ -0.39
CHCHD3-201ENST00000262570 BTNL8Q6UX41 500 aa12.62□□□□□ -0.39
CHCHD3-201ENST00000262570 MARC2Q969Z3 335 aa12.62□□□□□ -0.39
CHCHD3-201ENST00000262570 MGST2Q99735 147 aa12.62□□□□□ -0.39
CHCHD3-201ENST00000262570 ATP5SQ99766 215 aa12.62□□□□□ -0.39
CHCHD3-201ENST00000262570 SMIM3Q9BZL3 60 aa12.62□□□□□ -0.39
CHCHD3-201ENST00000262570 MRPL27Q9P0M9 148 aaKnown RBP12.62□□□□□ -0.39
CHCHD3-201ENST00000262570 HMSDA8MTL9 139 aa12.61□□□□□ -0.39
CHCHD3-201ENST00000262570 ARPC5O15511 151 aa12.61□□□□□ -0.39
CHCHD3-201ENST00000262570 DFFBO76075 338 aa12.61□□□□□ -0.39
CHCHD3-201ENST00000262570 CFDP00746 253 aaPredicted RBP12.61□□□□□ -0.39
CHCHD3-201ENST00000262570 RNF125Q96EQ8 232 aa12.61□□□□□ -0.39
CHCHD3-201ENST00000262570 FBXL17Q9UF56 701 aa12.61□□□□□ -0.39
CHCHD3-201ENST00000262570 MPDU1O75352 247 aa12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 FGF7P21781 194 aa12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 CAMLGP49069 296 aa12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 RAB31Q13636 194 aa12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 USF2Q15853 346 aaPredicted RBP12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 BPIFCQ8NFQ6 507 aa12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 GPR61Q9BZJ8 451 aa12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 WFDC1Q9HC57 220 aa12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 SLC45A2Q9UMX9 530 aa12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 IGHV7-4-1A0A0J9YVY3 117 aa12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 NPPCP23582 126 aa12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 CRYBB3P26998 211 aa12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 AP2S1P53680 142 aaPredicted RBP12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 CD300CQ08708 224 aa12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 SAMD5Q5TGI4 173 aa12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 METTL26Q96S19 204 aa12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 WDR61Q9GZS3 305 aaKnown RBP12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 MFFQ9GZY8 342 aa12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 SMPXQ9UHP9 88 aa12.6□□□□□ -0.39
CHCHD3-201ENST00000262570 G3V4G9 280 aa12.59□□□□□ -0.39
CHCHD3-201ENST00000262570 IGLV1-51P01701 117 aa12.59□□□□□ -0.39
CHCHD3-201ENST00000262570 LYZP61626 148 aa12.59□□□□□ -0.39
CHCHD3-201ENST00000262570 NEURL2Q9BR09 285 aa12.59□□□□□ -0.39
CHCHD3-201ENST00000262570 PBDC1Q9BVG4 233 aa12.59□□□□□ -0.39
CHCHD3-201ENST00000262570 GGTLC1Q9BX51 225 aa12.59□□□□□ -0.39
CHCHD3-201ENST00000262570 NPCDR1Q9BY65 106 aa12.59□□□□□ -0.39
CHCHD3-201ENST00000262570 NBEAL1Q6ZS30 2694 aa12.58□□□□□ -0.4
CHCHD3-201ENST00000262570 C1QBP02746 253 aa12.58□□□□□ -0.4
CHCHD3-201ENST00000262570 APOHP02749 345 aaPredicted RBP12.58□□□□□ -0.4
CHCHD3-201ENST00000262570 LINC00869P0C866 280 aa12.58□□□□□ -0.4
CHCHD3-201ENST00000262570 RPL29P47914 159 aaKnown RBP12.58□□□□□ -0.4
CHCHD3-201ENST00000262570 PLP1P60201 277 aa12.58□□□□□ -0.4
CHCHD3-201ENST00000262570 ZNF345Q14585 488 aa12.58□□□□□ -0.4
CHCHD3-201ENST00000262570 RHPN1-AS1Q9BWJ2 59 aa12.58□□□□□ -0.4
CHCHD3-201ENST00000262570 PARD6GQ9BYG4 376 aaPredicted RBP12.58□□□□□ -0.4
CHCHD3-201ENST00000262570 TECRQ9NZ01 308 aaKnown RBP12.58□□□□□ -0.4
CHCHD3-201ENST00000262570 MLXQ9UH92 298 aa12.58□□□□□ -0.4
CHCHD3-201ENST00000262570 U3KQE9 123 aa12.58□□□□□ -0.4
CHCHD3-201ENST00000262570 IGHV3-49A0A0A0MS15 119 aa12.57□□□□□ -0.4
CHCHD3-201ENST00000262570 CHEK1O14757 476 aa12.57□□□□□ -0.4
CHCHD3-201ENST00000262570 IFNA5P01569 189 aa12.57□□□□□ -0.4
CHCHD3-201ENST00000262570 HNRNPCP07910 306 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHCHD3-201ENST00000262570 PRR20EP86478 221 aa12.57□□□□□ -0.4
CHCHD3-201ENST00000262570 PRR20CP86479 221 aa12.57□□□□□ -0.4
CHCHD3-201ENST00000262570 PRR20DP86480 221 aa12.57□□□□□ -0.4
CHCHD3-201ENST00000262570 PRR20BP86481 221 aa12.57□□□□□ -0.4
CHCHD3-201ENST00000262570 PRR20AP86496 221 aa12.57□□□□□ -0.4
CHCHD3-201ENST00000262570 ZNF266Q14584 549 aa12.57□□□□□ -0.4
CHCHD3-201ENST00000262570 OPCMLQ14982 345 aa12.57□□□□□ -0.4
CHCHD3-201ENST00000262570 DEFB114Q30KQ6 69 aa12.57□□□□□ -0.4
CHCHD3-201ENST00000262570 VSIRQ9H7M9 311 aa12.57□□□□□ -0.4
CHCHD3-201ENST00000262570 RABAC1Q9UI14 185 aa12.57□□□□□ -0.4
CHCHD3-201ENST00000262570 IGHV3OR16-13A0A075B7E8 117 aa12.56□□□□□ -0.4
CHCHD3-201ENST00000262570 IGHV3-74A0A0B4J1X5 117 aa12.56□□□□□ -0.4
CHCHD3-201ENST00000262570 ORM2P19652 201 aa12.56□□□□□ -0.4
CHCHD3-201ENST00000262570 EIF2B2P49770 351 aaKnown RBP12.56□□□□□ -0.4
CHCHD3-201ENST00000262570 MIC13Q5XKP0 118 aa12.56□□□□□ -0.4
CHCHD3-201ENST00000262570 STPG3Q8N7X2 389 aa12.56□□□□□ -0.4
CHCHD3-201ENST00000262570 SCGB1C1Q8TD33 95 aa12.56□□□□□ -0.4
CHCHD3-201ENST00000262570 DYNLRB2Q8TF09 96 aa12.56□□□□□ -0.4
CHCHD3-201ENST00000262570 NOTCH1P46531 2555 aa12.56□□□□□ -0.4
CHCHD3-201ENST00000262570 A0A1W2PS18 150 aa12.56□□□□□ -0.4
CHCHD3-201ENST00000262570 CXCL2P19875 107 aa12.56□□□□□ -0.4
CHCHD3-201ENST00000262570 CD300EQ496F6 205 aaPredicted RBP12.56□□□□□ -0.4
CHCHD3-201ENST00000262570 PXDC1Q5TGL8 231 aa12.56□□□□□ -0.4
CHCHD3-201ENST00000262570 KCNRGQ8N5I3 272 aa12.56□□□□□ -0.4
CHCHD3-201ENST00000262570 OR1B1Q8NGR6 318 aa12.56□□□□□ -0.4
CHCHD3-201ENST00000262570 ST8SIA2Q92186 375 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms