RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 CELSR3Q9NYQ7 3312 aa6.28□□□□□ -1.4
CXCR4-201ENST00000241393 HELTA6NFD8 242 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 K7EN84 100 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 ISLRO14498 428 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 FCN3O75636 299 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 MT-ND6P03923 174 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 ESDP10768 282 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 SRD5A1P18405 259 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 LOXP28300 417 aaPredicted RBP6.27□□□□□ -1.41
CXCR4-201ENST00000241393 CHRNB4P30926 498 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 GNG4P50150 75 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 TAS2R60P59551 318 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 PAX2Q02962 417 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 CLEC12BQ2HXU8 276 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 TIGITQ495A1 244 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 ETFRF1Q6IPR1 90 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 TGIF2LXQ8IUE1 241 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 ZNF430Q9H8G1 570 aaPredicted RBP6.27□□□□□ -1.41
CXCR4-201ENST00000241393 DNAJC4Q9NNZ3 241 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 GVINP1Q7Z2Y8 2422 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 TNCP24821 2201 aa6.27□□□□□ -1.41
CXCR4-201ENST00000241393 PRRC2CQ9Y520 2896 aaKnown RBP6.27□□□□□ -1.41
CXCR4-201ENST00000241393 TCRBV4S1A1TA0A5B7 111 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 SHISA9B4DS77 424 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 OR7C2O60412 319 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 IGLV2-23P01705 113 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 RBP4P02753 201 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 DDTP30046 118 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 PPOXP50336 477 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 BPIFB3P59826 476 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 IQCJQ1A5X6 159 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 RPEL1Q2QD12 228 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 CENPWQ5EE01 88 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 WDR73Q6P4I2 378 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 STXBP6Q8NFX7 210 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 IGFBPL1Q8WX77 278 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 TMEM190Q8WZ59 177 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 H1FXQ92522 213 aaKnown RBP6.26□□□□□ -1.41
CXCR4-201ENST00000241393 CCL17Q92583 94 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 FAM167A-AS1Q96KT0 104 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 GNB1LQ9BYB4 327 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 DYNLRB1Q9NP97 96 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 ZNRD1Q9P1U0 126 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 V9GYV3 84 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 FRYQ5TBA9 3013 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 ZFHX2Q9C0A1 2572 aaPredicted RBP6.26□□□□□ -1.41
CXCR4-201ENST00000241393 CEP250Q9BV73 2442 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 ICE1Q9Y2F5 2266 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 GGTLC3B5MD39 225 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 CRYGCP07315 174 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 IGHV1-8P0DP01 117 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 TMEM11P17152 192 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 CRYBB3P26998 211 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 COMPP49747 757 aaPredicted RBP6.26□□□□□ -1.41
CXCR4-201ENST00000241393 ERVFC1-1P60608 527 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 PAFAH1B2P68402 229 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 WT1-ASQ06250 92 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 LBHQ53QV2 105 aaPredicted RBP6.26□□□□□ -1.41
CXCR4-201ENST00000241393 C9orf152Q5JTZ5 239 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 MOB3BQ86TA1 216 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 MMD2Q8IY49 270 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 OR10W1Q8NGF6 305 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 WFIKKN1Q96NZ8 548 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 TMEM133Q9H2Q1 129 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 CTSZQ9UBR2 303 aa6.26□□□□□ -1.41
CXCR4-201ENST00000241393 ZMAT5Q9UDW3 170 aaKnown RBP6.26□□□□□ -1.41
CXCR4-201ENST00000241393 IGHV1-69-2A0A0G2JMI3 117 aa6.25□□□□□ -1.41
CXCR4-201ENST00000241393 E7EQL1 145 aa6.25□□□□□ -1.41
CXCR4-201ENST00000241393 CORTO00230 105 aa6.25□□□□□ -1.41
CXCR4-201ENST00000241393 COX7A2P2O60397 106 aa6.25□□□□□ -1.41
CXCR4-201ENST00000241393 RANP62826 216 aaKnown RBP6.25□□□□□ -1.41
CXCR4-201ENST00000241393 UBE2L3P68036 154 aaKnown RBP6.25□□□□□ -1.41
CXCR4-201ENST00000241393 CX3CL1P78423 397 aa6.25□□□□□ -1.41
CXCR4-201ENST00000241393 Q0VG73 95 aa6.25□□□□□ -1.41
CXCR4-201ENST00000241393 FBXL19-AS1Q494R0 122 aa6.25□□□□□ -1.41
CXCR4-201ENST00000241393 LYPD2Q6UXB3 125 aa6.25□□□□□ -1.41
CXCR4-201ENST00000241393 FAM231DQ6ZW35 169 aa6.25□□□□□ -1.41
CXCR4-201ENST00000241393 ZCCHC24Q8N2G6 241 aaKnown RBP6.25□□□□□ -1.41
CXCR4-201ENST00000241393 FAM122AQ96E09 287 aa6.25□□□□□ -1.41
CXCR4-201ENST00000241393 SMIM12Q96EX1 92 aa6.25□□□□□ -1.41
CXCR4-201ENST00000241393 IGF2BP2-AS1Q96M15 143 aa6.25□□□□□ -1.41
CXCR4-201ENST00000241393 RNF5Q99942 180 aa6.25□□□□□ -1.41
CXCR4-201ENST00000241393 SLC25A2Q9BXI2 301 aa6.25□□□□□ -1.41
CXCR4-201ENST00000241393 NPFFR1Q9GZQ6 430 aa6.25□□□□□ -1.41
CXCR4-201ENST00000241393 YLPM1P49750 1951 aaKnown RBP6.25□□□□□ -1.41
CXCR4-201ENST00000241393 IGKV1D-37A0A075B6S9 117 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 K7ENP7 123 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 IGLV2-8P01709 118 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 CRYGBP07316 175 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 GATA2P23769 480 aaPredicted RBP6.24□□□□□ -1.41
CXCR4-201ENST00000241393 REG1BP48304 166 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 PRRX1P54821 245 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 ASPHD1Q5U4P2 390 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 C10orf113Q5VZT2 155 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 RASL11AQ6T310 242 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 C11orf42Q8N5U0 333 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 OR5AU1Q8NGC0 362 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 OR1L6Q8NGR2 347 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 OR2T6Q8NHC8 308 aa6.24□□□□□ -1.41
CXCR4-201ENST00000241393 CMTM2Q8TAZ6 248 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms