RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 ZNF320A2RRD8 509 aa13.42□□□□□ -0.26
GAPDH-201ENST00000229239 PGPEP1LA6NFU8 196 aa13.42□□□□□ -0.26
GAPDH-201ENST00000229239 CNIH1O95406 144 aa13.42□□□□□ -0.26
GAPDH-201ENST00000229239 COX19Q49B96 90 aa13.42□□□□□ -0.26
GAPDH-201ENST00000229239 CENPWQ5EE01 88 aa13.42□□□□□ -0.26
GAPDH-201ENST00000229239 LINC00305Q7Z4B0 112 aa13.42□□□□□ -0.26
GAPDH-201ENST00000229239 TMEM183AQ8IXX5 376 aa13.42□□□□□ -0.26
GAPDH-201ENST00000229239 ABCA4P78363 2273 aa13.41□□□□□ -0.26
GAPDH-201ENST00000229239 ISLRO14498 428 aa13.41□□□□□ -0.26
GAPDH-201ENST00000229239 GCGP01275 180 aa13.41□□□□□ -0.26
GAPDH-201ENST00000229239 CNN1P51911 297 aaKnown RBP13.41□□□□□ -0.26
GAPDH-201ENST00000229239 MORN5Q5VZ52 161 aa13.41□□□□□ -0.26
GAPDH-201ENST00000229239 AURKAIP1Q9NWT8 199 aaPredicted RBP13.41□□□□□ -0.26
GAPDH-201ENST00000229239 TRAV5A0A0B4J249 113 aa13.4□□□□□ -0.26
GAPDH-201ENST00000229239 A0A1W2PPR1 153 aa13.4□□□□□ -0.26
GAPDH-201ENST00000229239 K7EN84 100 aa13.4□□□□□ -0.26
GAPDH-201ENST00000229239 PDLIM4P50479 330 aa13.4□□□□□ -0.26
GAPDH-201ENST00000229239 S100A7AQ86SG5 101 aa13.4□□□□□ -0.26
GAPDH-201ENST00000229239 SMIM12Q96EX1 92 aa13.4□□□□□ -0.26
GAPDH-201ENST00000229239 TRBV9A0A0B4J1U6 114 aa13.4□□□□□ -0.26
GAPDH-201ENST00000229239 I3L2K1 104 aa13.4□□□□□ -0.26
GAPDH-201ENST00000229239 FCN1O00602 326 aa13.4□□□□□ -0.26
GAPDH-201ENST00000229239 IGHV3-48P01763 117 aa13.4□□□□□ -0.26
GAPDH-201ENST00000229239 ERVFC1-1P60608 527 aa13.4□□□□□ -0.26
GAPDH-201ENST00000229239 YPEL3P61236 119 aaPredicted RBP13.4□□□□□ -0.26
GAPDH-201ENST00000229239 FXYD5Q96DB9 178 aa13.4□□□□□ -0.26
GAPDH-201ENST00000229239 UBTD1Q9HAC8 227 aa13.4□□□□□ -0.26
GAPDH-201ENST00000229239 HILPDAQ9Y5L2 63 aa13.4□□□□□ -0.26
GAPDH-201ENST00000229239 CELSR1Q9NYQ6 3014 aa13.39□□□□□ -0.27
GAPDH-201ENST00000229239 IFITM10A6NMD0 228 aa13.39□□□□□ -0.27
GAPDH-201ENST00000229239 CDKN1AP38936 164 aa13.39□□□□□ -0.27
GAPDH-201ENST00000229239 RPL15P61313 204 aaKnown RBP13.39□□□□□ -0.27
GAPDH-201ENST00000229239 EBI3Q14213 229 aa13.39□□□□□ -0.27
GAPDH-201ENST00000229239 RPEL1Q2QD12 228 aa13.39□□□□□ -0.27
GAPDH-201ENST00000229239 VMO1Q7Z5L0 202 aa13.39□□□□□ -0.27
GAPDH-201ENST00000229239 WNT10AQ9GZT5 417 aa13.39□□□□□ -0.27
GAPDH-201ENST00000229239 RNF24Q9Y225 148 aa13.39□□□□□ -0.27
GAPDH-201ENST00000229239 TBL2Q9Y4P3 447 aaKnown RBP13.39□□□□□ -0.27
GAPDH-201ENST00000229239 TRAPPC1Q9Y5R8 145 aa13.39□□□□□ -0.27
GAPDH-201ENST00000229239 HRNRQ86YZ3 2850 aaPredicted RBP13.39□□□□□ -0.27
GAPDH-201ENST00000229239 PCP4L1A6NKN8 68 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 ORM2P19652 201 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 LGALS4P56470 323 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 KLRD1Q13241 179 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 C5orf64Q2M2E5 130 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 OR1B1Q8NGR6 318 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 CHRDL1Q9BU40 450 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 NIT2Q9NQR4 276 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 DMRT1Q9Y5R6 373 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 TRAV30A0A087WSZ9 112 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 IGLC1P0CG04 106 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 ZNF562Q6V9R5 426 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 LHFPL4Q7Z7J7 247 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 ZNF329Q86UD4 541 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 IGF2BP2-AS1Q96M15 143 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 RASL11BQ9BPW5 248 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 GPR61Q9BZJ8 451 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 SIRPDQ9H106 197 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 TMEM14CQ9P0S9 112 aa13.38□□□□□ -0.27
GAPDH-201ENST00000229239 XKRY2A2RUG3 117 aa13.37□□□□□ -0.27
GAPDH-201ENST00000229239 PYYP10082 97 aa13.37□□□□□ -0.27
GAPDH-201ENST00000229239 HOXB4P17483 251 aaPredicted RBP13.37□□□□□ -0.27
GAPDH-201ENST00000229239 MYCNOSP40205 109 aa13.37□□□□□ -0.27
GAPDH-201ENST00000229239 FXYD3Q14802 87 aa13.37□□□□□ -0.27
GAPDH-201ENST00000229239 CLEC12BQ2HXU8 276 aa13.37□□□□□ -0.27
GAPDH-201ENST00000229239 NRGNQ92686 78 aa13.37□□□□□ -0.27
GAPDH-201ENST00000229239 HIGD1AQ9Y241 93 aa13.37□□□□□ -0.27
GAPDH-201ENST00000229239 V9GYV3 84 aa13.37□□□□□ -0.27
GAPDH-201ENST00000229239 TEP1Q99973 2627 aaKnown RBP13.37□□□□□ -0.27
GAPDH-201ENST00000229239 AKAP6Q13023 2319 aa13.36□□□□□ -0.27
GAPDH-201ENST00000229239 NAV3Q8IVL0 2385 aa13.36□□□□□ -0.27
GAPDH-201ENST00000229239 IGHV2-70DA0A0C4DH43 119 aa13.36□□□□□ -0.27
GAPDH-201ENST00000229239 NPIPB5A8MRT5 1133 aa13.36□□□□□ -0.27
GAPDH-201ENST00000229239 PEX7O00628 323 aa13.36□□□□□ -0.27
GAPDH-201ENST00000229239 HNF1AP20823 631 aa13.36□□□□□ -0.27
GAPDH-201ENST00000229239 FAM231DQ6ZW35 169 aa13.36□□□□□ -0.27
GAPDH-201ENST00000229239 Q8N6K4 173 aa13.36□□□□□ -0.27
GAPDH-201ENST00000229239 ZNF48Q96MX3 618 aaPredicted RBP13.36□□□□□ -0.27
GAPDH-201ENST00000229239 C1RLQ9NZP8 487 aa13.36□□□□□ -0.27
GAPDH-201ENST00000229239 NBEAP1P0C6P0 100 aa13.36□□□□□ -0.27
GAPDH-201ENST00000229239 APELAP0DMC3 54 aa13.36□□□□□ -0.27
GAPDH-201ENST00000229239 ZFP36P26651 326 aaKnown RBP13.36□□□□□ -0.27
GAPDH-201ENST00000229239 RUSC1-AS1Q66K80 236 aa13.36□□□□□ -0.27
GAPDH-201ENST00000229239 OR10D4PQ8NGN7 298 aa13.36□□□□□ -0.27
GAPDH-201ENST00000229239 SCGB2A1O75556 95 aa13.35□□□□□ -0.27
GAPDH-201ENST00000229239 IGLV2-8P01709 118 aa13.35□□□□□ -0.27
GAPDH-201ENST00000229239 MT-ND6P03923 174 aa13.35□□□□□ -0.27
GAPDH-201ENST00000229239 HES1Q14469 280 aa13.35□□□□□ -0.27
GAPDH-201ENST00000229239 TMEM183BQ1AE95 376 aa13.35□□□□□ -0.27
GAPDH-201ENST00000229239 WDR73Q6P4I2 378 aa13.35□□□□□ -0.27
GAPDH-201ENST00000229239 C19orf35Q6ZS72 473 aa13.35□□□□□ -0.27
GAPDH-201ENST00000229239 RBM14Q96PK6 669 aaKnown RBP13.35□□□□□ -0.27
GAPDH-201ENST00000229239 THYN1Q9P016 225 aa13.35□□□□□ -0.27
GAPDH-201ENST00000229239 K7EIM0 57 aa13.34□□□□□ -0.27
GAPDH-201ENST00000229239 OVOL3O00110 214 aa13.34□□□□□ -0.27
GAPDH-201ENST00000229239 RD3LP0DJH9 198 aa13.34□□□□□ -0.27
GAPDH-201ENST00000229239 UBE2E1P51965 193 aa13.34□□□□□ -0.27
GAPDH-201ENST00000229239 IBA57Q5T440 356 aaKnown RBP13.34□□□□□ -0.27
GAPDH-201ENST00000229239 TMEM68Q96MH6 324 aa13.34□□□□□ -0.27
GAPDH-201ENST00000229239 EPDR1Q9UM22 224 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms