RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 HRH4Q9H3N8 390 aa13.42□□□□□ -0.26
CLN6-220ENST00000637450 NAA60Q9H7X0 242 aa13.42□□□□□ -0.26
CLN6-220ENST00000637450 HEYLQ9NQ87 328 aaPredicted RBP13.42□□□□□ -0.26
CLN6-220ENST00000637450 C14orf166Q9Y224 244 aaKnown RBP13.42□□□□□ -0.26
CLN6-220ENST00000637450 HECTD4Q9Y4D8 3996 aa13.42□□□□□ -0.26
CLN6-220ENST00000637450 KNCNA6PVL3 124 aa13.41□□□□□ -0.26
CLN6-220ENST00000637450 RBMY1A1P0DJD3 496 aaKnown RBP13.41□□□□□ -0.26
CLN6-220ENST00000637450 RBMY1CP0DJD4 496 aa13.41□□□□□ -0.26
CLN6-220ENST00000637450 SPP1P10451 314 aa13.41□□□□□ -0.26
CLN6-220ENST00000637450 SLC25A4P12235 298 aa13.41□□□□□ -0.26
CLN6-220ENST00000637450 YPEL3P61236 119 aaPredicted RBP13.41□□□□□ -0.26
CLN6-220ENST00000637450 MRPS10P82664 201 aaKnown RBP13.41□□□□□ -0.26
CLN6-220ENST00000637450 RBMY1FQ15415 496 aaKnown RBP13.41□□□□□ -0.26
CLN6-220ENST00000637450 RNASEH2CQ8TDP1 164 aaKnown RBP13.41□□□□□ -0.26
CLN6-220ENST00000637450 Q8WTZ3 238 aa13.41□□□□□ -0.26
CLN6-220ENST00000637450 CACNG5Q9UF02 275 aa13.41□□□□□ -0.26
CLN6-220ENST00000637450 GPR132Q9UNW8 380 aa13.41□□□□□ -0.26
CLN6-220ENST00000637450 IGHV4-28A0A0C4DH34 117 aa13.4□□□□□ -0.26
CLN6-220ENST00000637450 ZNF705EA8MWA4 302 aaPredicted RBP13.4□□□□□ -0.26
CLN6-220ENST00000637450 DISC1C4P0D8 188 aa13.4□□□□□ -0.26
CLN6-220ENST00000637450 C11orf94C9JXX5 98 aa13.4□□□□□ -0.26
CLN6-220ENST00000637450 CTDSP2O14595 271 aa13.4□□□□□ -0.26
CLN6-220ENST00000637450 RGS5O15539 181 aa13.4□□□□□ -0.26
CLN6-220ENST00000637450 OR10J1P30954 320 aa13.4□□□□□ -0.26
CLN6-220ENST00000637450 RND2P52198 227 aa13.4□□□□□ -0.26
CLN6-220ENST00000637450 PRR20EP86478 221 aa13.4□□□□□ -0.26
CLN6-220ENST00000637450 PRR20CP86479 221 aa13.4□□□□□ -0.26
CLN6-220ENST00000637450 PRR20DP86480 221 aa13.4□□□□□ -0.26
CLN6-220ENST00000637450 PRR20BP86481 221 aa13.4□□□□□ -0.26
CLN6-220ENST00000637450 PRR20AP86496 221 aa13.4□□□□□ -0.26
CLN6-220ENST00000637450 C16orf54Q6UWD8 224 aa13.4□□□□□ -0.26
CLN6-220ENST00000637450 TMEM170AQ8WVE7 144 aa13.4□□□□□ -0.26
CLN6-220ENST00000637450 HELTA6NFD8 242 aa13.39□□□□□ -0.27
CLN6-220ENST00000637450 CRYM-AS1A6NIL9 109 aa13.39□□□□□ -0.27
CLN6-220ENST00000637450 CEBPZOSA8MTT3 80 aa13.39□□□□□ -0.27
CLN6-220ENST00000637450 HNRNPCP07910 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
CLN6-220ENST00000637450 MIFP14174 115 aa13.39□□□□□ -0.27
CLN6-220ENST00000637450 C4BPBP20851 252 aa13.39□□□□□ -0.27
CLN6-220ENST00000637450 EIF2B2P49770 351 aaKnown RBP13.39□□□□□ -0.27
CLN6-220ENST00000637450 AP2S1P53680 142 aaPredicted RBP13.39□□□□□ -0.27
CLN6-220ENST00000637450 DHRS2Q13268 280 aa13.39□□□□□ -0.27
CLN6-220ENST00000637450 ACTL10Q5JWF8 245 aa13.39□□□□□ -0.27
CLN6-220ENST00000637450 TMEM268Q5VZI3 342 aa13.39□□□□□ -0.27
CLN6-220ENST00000637450 SLC24A4Q8NFF2 622 aa13.39□□□□□ -0.27
CLN6-220ENST00000637450 SMIM4Q8WVI0 70 aa13.39□□□□□ -0.27
CLN6-220ENST00000637450 GLMPQ8WWB7 406 aa13.39□□□□□ -0.27
CLN6-220ENST00000637450 RAB40CQ96S21 281 aa13.39□□□□□ -0.27
CLN6-220ENST00000637450 APLNQ9ULZ1 77 aa13.39□□□□□ -0.27
CLN6-220ENST00000637450 TMEM56-RWDD3S4R434 201 aa13.39□□□□□ -0.27
CLN6-220ENST00000637450 X6R8D5 127 aa13.39□□□□□ -0.27
CLN6-220ENST00000637450 AGRNO00468 2067 aa13.38□□□□□ -0.27
CLN6-220ENST00000637450 IGLL5B9A064 214 aa13.38□□□□□ -0.27
CLN6-220ENST00000637450 CSNK1G2-AS1Q8NCQ2 148 aa13.38□□□□□ -0.27
CLN6-220ENST00000637450 OR4C16Q8NGL9 310 aa13.38□□□□□ -0.27
CLN6-220ENST00000637450 CTDSPLO15194 276 aa13.37□□□□□ -0.27
CLN6-220ENST00000637450 NXPH3O95157 252 aa13.37□□□□□ -0.27
CLN6-220ENST00000637450 AKAIN1P0CW23 69 aa13.37□□□□□ -0.27
CLN6-220ENST00000637450 SPCS2Q15005 226 aa13.37□□□□□ -0.27
CLN6-220ENST00000637450 USF2Q15853 346 aaPredicted RBP13.37□□□□□ -0.27
CLN6-220ENST00000637450 ETFRF1Q6IPR1 90 aa13.37□□□□□ -0.27
CLN6-220ENST00000637450 NPIPB3Q92617 1050 aa13.37□□□□□ -0.27
CLN6-220ENST00000637450 CACFD1Q9UGQ2 172 aa13.37□□□□□ -0.27
CLN6-220ENST00000637450 ELOA3CA0A087WX78 387 aaPredicted RBP13.36□□□□□ -0.27
CLN6-220ENST00000637450 IL4P05112 153 aa13.36□□□□□ -0.27
CLN6-220ENST00000637450 HLA-DMBP28068 263 aa13.36□□□□□ -0.27
CLN6-220ENST00000637450 NMSQ5H8A3 153 aa13.36□□□□□ -0.27
CLN6-220ENST00000637450 PSMG4Q5JS54 123 aa13.36□□□□□ -0.27
CLN6-220ENST00000637450 NOXA1Q86UR1 476 aa13.36□□□□□ -0.27
CLN6-220ENST00000637450 IL22RA2Q969J5 263 aa13.36□□□□□ -0.27
CLN6-220ENST00000637450 PRRT1Q99946 306 aa13.36□□□□□ -0.27
CLN6-220ENST00000637450 SEPSECSQ9HD40 501 aaKnown RBP13.36□□□□□ -0.27
CLN6-220ENST00000637450 CLEC5AQ9NY25 188 aa13.36□□□□□ -0.27
CLN6-220ENST00000637450 TBC1D24Q9ULP9 559 aa13.36□□□□□ -0.27
CLN6-220ENST00000637450 BUB3O43684 328 aa13.35□□□□□ -0.27
CLN6-220ENST00000637450 RD3LP0DJH9 198 aa13.35□□□□□ -0.27
CLN6-220ENST00000637450 SULT1A3P0DMM9 295 aa13.35□□□□□ -0.27
CLN6-220ENST00000637450 SULT1A4P0DMN0 295 aa13.35□□□□□ -0.27
CLN6-220ENST00000637450 NPY1RP25929 384 aa13.35□□□□□ -0.27
CLN6-220ENST00000637450 ALDH3B2P48448 385 aa13.35□□□□□ -0.27
CLN6-220ENST00000637450 GPR141Q7Z602 305 aa13.35□□□□□ -0.27
CLN6-220ENST00000637450 OR51S1Q8NGJ8 323 aa13.35□□□□□ -0.27
CLN6-220ENST00000637450 DIRAS2Q96HU8 199 aa13.35□□□□□ -0.27
CLN6-220ENST00000637450 RABL2AQ9UBK7 228 aaPredicted RBP13.35□□□□□ -0.27
CLN6-220ENST00000637450 RABL2BQ9UNT1 228 aa13.35□□□□□ -0.27
CLN6-220ENST00000637450 FAM90A26D6RGX4 464 aa13.34□□□□□ -0.27
CLN6-220ENST00000637450 TOMM40O96008 361 aa13.34□□□□□ -0.27
CLN6-220ENST00000637450 SNRPD3P62318 126 aaKnown RBP13.34□□□□□ -0.27
CLN6-220ENST00000637450 IL18Q14116 193 aa13.34□□□□□ -0.27
CLN6-220ENST00000637450 Q6ZTC4 211 aa13.34□□□□□ -0.27
CLN6-220ENST00000637450 CLVS1Q8IUQ0 354 aaPredicted RBP13.34□□□□□ -0.27
CLN6-220ENST00000637450 ACY3Q96HD9 319 aa13.34□□□□□ -0.27
CLN6-220ENST00000637450 MRPS26Q9BYN8 205 aaKnown RBP13.34□□□□□ -0.27
CLN6-220ENST00000637450 NRN1Q9NPD7 142 aa13.34□□□□□ -0.27
CLN6-220ENST00000637450 KCNIP3Q9Y2W7 256 aa13.34□□□□□ -0.27
CLN6-220ENST00000637450 U3KQ87 197 aa13.34□□□□□ -0.27
CLN6-220ENST00000637450 TRAV10A0A0B4J240 114 aa13.33□□□□□ -0.28
CLN6-220ENST00000637450 ANKRD20A5PA0PJZ0 165 aa13.33□□□□□ -0.28
CLN6-220ENST00000637450 IFNA10P01566 189 aa13.33□□□□□ -0.28
CLN6-220ENST00000637450 SIGLEC15Q6ZMC9 328 aa13.33□□□□□ -0.28
CLN6-220ENST00000637450 PRR13Q9NZ81 148 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms