RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 IL22RA2Q969J5 263 aa13.21□□□□□ -0.29
PNKP-225ENST00000636214 RARRES2Q99969 163 aa13.21□□□□□ -0.29
PNKP-225ENST00000636214 PIGBOS1A0A0B4J2F0 54 aa13.2□□□□□ -0.3
PNKP-225ENST00000636214 ANKRD20A5PA0PJZ0 165 aa13.2□□□□□ -0.3
PNKP-225ENST00000636214 FABP12A6NFH5 140 aa13.2□□□□□ -0.3
PNKP-225ENST00000636214 NXPH3O95157 252 aa13.2□□□□□ -0.3
PNKP-225ENST00000636214 CA1P00915 261 aaPredicted RBP13.2□□□□□ -0.3
PNKP-225ENST00000636214 NPY1RP25929 384 aa13.2□□□□□ -0.3
PNKP-225ENST00000636214 OR10J1P30954 320 aa13.2□□□□□ -0.3
PNKP-225ENST00000636214 RND2P52198 227 aa13.2□□□□□ -0.3
PNKP-225ENST00000636214 SRPXP78539 464 aa13.2□□□□□ -0.3
PNKP-225ENST00000636214 MLANAQ16655 118 aa13.2□□□□□ -0.3
PNKP-225ENST00000636214 LEMD1Q68G75 181 aa13.2□□□□□ -0.3
PNKP-225ENST00000636214 Q8WTZ3 238 aa13.2□□□□□ -0.3
PNKP-225ENST00000636214 MRPL36Q9P0J6 103 aaKnown RBP13.2□□□□□ -0.3
PNKP-225ENST00000636214 TMEM56-RWDD3S4R434 201 aa13.2□□□□□ -0.3
PNKP-225ENST00000636214 IFNA10P01566 189 aa13.19□□□□□ -0.3
PNKP-225ENST00000636214 AKR1C4P17516 323 aa13.19□□□□□ -0.3
PNKP-225ENST00000636214 CRYBB3P26998 211 aa13.19□□□□□ -0.3
PNKP-225ENST00000636214 CEMP1Q6PRD7 247 aaPredicted RBP13.19□□□□□ -0.3
PNKP-225ENST00000636214 LILRB2Q8N423 598 aa13.19□□□□□ -0.3
PNKP-225ENST00000636214 MCFD2Q8NI22 146 aa13.19□□□□□ -0.3
PNKP-225ENST00000636214 ALMS1Q8TCU4 4167 aa13.19□□□□□ -0.3
PNKP-225ENST00000636214 HELTA6NFD8 242 aa13.18□□□□□ -0.3
PNKP-225ENST00000636214 LY6G6CO95867 125 aa13.18□□□□□ -0.3
PNKP-225ENST00000636214 IGKV1-17P01599 117 aa13.18□□□□□ -0.3
PNKP-225ENST00000636214 HNRNPCP07910 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
PNKP-225ENST00000636214 CCR6P51684 374 aa13.18□□□□□ -0.3
PNKP-225ENST00000636214 AP3S2P59780 193 aa13.18□□□□□ -0.3
PNKP-225ENST00000636214 TMEM187Q14656 261 aa13.18□□□□□ -0.3
PNKP-225ENST00000636214 PRSS54Q6PEW0 395 aa13.18□□□□□ -0.3
PNKP-225ENST00000636214 OR11H2Q8NH07 326 aa13.18□□□□□ -0.3
PNKP-225ENST00000636214 LINC00476Q8WZB0 136 aa13.18□□□□□ -0.3
PNKP-225ENST00000636214 HYDINQ4G0P3 5121 aa13.17□□□□□ -0.3
PNKP-225ENST00000636214 A0A0B4J2A0 478 aa13.17□□□□□ -0.3
PNKP-225ENST00000636214 H3BMQ9 156 aa13.17□□□□□ -0.3
PNKP-225ENST00000636214 IGLC1P0CG04 106 aa13.17□□□□□ -0.3
PNKP-225ENST00000636214 AP2S1P53680 142 aaPredicted RBP13.17□□□□□ -0.3
PNKP-225ENST00000636214 YPEL3P61236 119 aaPredicted RBP13.17□□□□□ -0.3
PNKP-225ENST00000636214 EWSR1Q01844 656 aaKnown RBP eCLIP13.17□□□□□ -0.3
PNKP-225ENST00000636214 SMCO1Q147U7 214 aa13.17□□□□□ -0.3
PNKP-225ENST00000636214 LGI3Q8N145 548 aa13.17□□□□□ -0.3
PNKP-225ENST00000636214 ACY3Q96HD9 319 aa13.17□□□□□ -0.3
PNKP-225ENST00000636214 MFFQ9GZY8 342 aa13.17□□□□□ -0.3
PNKP-225ENST00000636214 SHPKQ9UHJ6 478 aa13.17□□□□□ -0.3
PNKP-225ENST00000636214 U3KQ87 197 aa13.17□□□□□ -0.3
PNKP-225ENST00000636214 CCDC160A6NGH7 325 aa13.16□□□□□ -0.3
PNKP-225ENST00000636214 IL4P05112 153 aa13.16□□□□□ -0.3
PNKP-225ENST00000636214 TNFSF8P32971 234 aa13.16□□□□□ -0.3
PNKP-225ENST00000636214 DHRS2Q13268 280 aa13.16□□□□□ -0.3
PNKP-225ENST00000636214 PYDC2Q56P42 97 aa13.16□□□□□ -0.3
PNKP-225ENST00000636214 OR1S1Q8NH92 325 aa13.16□□□□□ -0.3
PNKP-225ENST00000636214 DTD1Q8TEA8 209 aa13.16□□□□□ -0.3
PNKP-225ENST00000636214 SLIRPQ9GZT3 109 aaKnown RBP13.16□□□□□ -0.3
PNKP-225ENST00000636214 C11orf68Q9H3H3 251 aaKnown RBP13.16□□□□□ -0.3
PNKP-225ENST00000636214 AGRNO00468 2067 aa13.16□□□□□ -0.3
PNKP-225ENST00000636214 K7EQG2 157 aa13.15□□□□□ -0.3
PNKP-225ENST00000636214 IFNA4P05014 189 aa13.15□□□□□ -0.3
PNKP-225ENST00000636214 ZNF688P0C7X2 276 aa13.15□□□□□ -0.3
PNKP-225ENST00000636214 RBMS2Q15434 407 aaKnown RBP13.15□□□□□ -0.3
PNKP-225ENST00000636214 TMEM41BQ5BJD5 291 aa13.15□□□□□ -0.3
PNKP-225ENST00000636214 TOMM5Q8N4H5 51 aa13.15□□□□□ -0.3
PNKP-225ENST00000636214 FAM24BQ8N5W8 94 aa13.15□□□□□ -0.3
PNKP-225ENST00000636214 C11orf45Q8TAV5 145 aa13.15□□□□□ -0.3
PNKP-225ENST00000636214 PHLDA1Q8WV24 401 aaPredicted RBP13.15□□□□□ -0.3
PNKP-225ENST00000636214 NPIPB3Q92617 1050 aa13.15□□□□□ -0.3
PNKP-225ENST00000636214 PRR13Q9NZ81 148 aa13.15□□□□□ -0.3
PNKP-225ENST00000636214 PFDN2Q9UHV9 154 aa13.15□□□□□ -0.3
PNKP-225ENST00000636214 RD3LP0DJH9 198 aa13.14□□□□□ -0.31
PNKP-225ENST00000636214 SPP1P10451 314 aa13.14□□□□□ -0.31
PNKP-225ENST00000636214 S100A5P33763 92 aa13.14□□□□□ -0.31
PNKP-225ENST00000636214 NUP62P37198 522 aaPredicted RBP13.14□□□□□ -0.31
PNKP-225ENST00000636214 NMSQ5H8A3 153 aa13.14□□□□□ -0.31
PNKP-225ENST00000636214 MORN3Q6PF18 240 aaPredicted RBP13.14□□□□□ -0.31
PNKP-225ENST00000636214 TMED4Q7Z7H5 227 aa13.14□□□□□ -0.31
PNKP-225ENST00000636214 FBXL17Q9UF56 701 aa13.14□□□□□ -0.31
PNKP-225ENST00000636214 TOMM40O96008 361 aa13.13□□□□□ -0.31
PNKP-225ENST00000636214 ATP5IP56385 69 aaPredicted RBP13.13□□□□□ -0.31
PNKP-225ENST00000636214 SNRPD3P62318 126 aaKnown RBP13.13□□□□□ -0.31
PNKP-225ENST00000636214 LYZL2Q7Z4W2 148 aa13.13□□□□□ -0.31
PNKP-225ENST00000636214 CENPSQ8N2Z9 138 aa13.13□□□□□ -0.31
PNKP-225ENST00000636214 SLC35E1Q96K37 410 aa13.13□□□□□ -0.31
PNKP-225ENST00000636214 RBKSQ9H477 322 aa13.13□□□□□ -0.31
PNKP-225ENST00000636214 HSPB7Q9UBY9 170 aa13.13□□□□□ -0.31
PNKP-225ENST00000636214 EPPK1P58107 5090 aaKnown RBP13.12□□□□□ -0.31
PNKP-225ENST00000636214 BIRC6Q9NR09 4857 aa13.12□□□□□ -0.31
PNKP-225ENST00000636214 DUXBA0A1W2PPF3 345 aa13.12□□□□□ -0.31
PNKP-225ENST00000636214 FABP1P07148 127 aa13.12□□□□□ -0.31
PNKP-225ENST00000636214 ACTL10Q5JWF8 245 aa13.12□□□□□ -0.31
PNKP-225ENST00000636214 C16orf54Q6UWD8 224 aa13.12□□□□□ -0.31
PNKP-225ENST00000636214 PAIP2BQ9ULR5 123 aaKnown RBP13.12□□□□□ -0.31
PNKP-225ENST00000636214 ZFP92A6NM28 416 aa13.11□□□□□ -0.31
PNKP-225ENST00000636214 KNCNA6PVL3 124 aa13.11□□□□□ -0.31
PNKP-225ENST00000636214 VAMP1P23763 118 aa13.11□□□□□ -0.31
PNKP-225ENST00000636214 NANOS2P60321 138 aaKnown RBP13.11□□□□□ -0.31
PNKP-225ENST00000636214 SUPT4H1P63272 117 aaKnown RBP13.11□□□□□ -0.31
PNKP-225ENST00000636214 KLF9Q13886 244 aaPredicted RBP13.11□□□□□ -0.31
PNKP-225ENST00000636214 PSMG4Q5JS54 123 aa13.11□□□□□ -0.31
PNKP-225ENST00000636214 SIGLEC15Q6ZMC9 328 aa13.11□□□□□ -0.31
PNKP-225ENST00000636214 TRPT1Q86TN4 253 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms