RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 OR8S1Q8NH09 359 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OR4K15Q8NH41 348 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OR10A6Q8NH74 314 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OR1S1Q8NH92 325 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OR1L1Q8NH94 360 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 MFSD8Q8NHS3 518 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 GRPEL2Q8TAA5 225 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 ENKURQ8TC29 256 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM239Q8WW34 195 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 GTF2H4Q92759 462 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 MCUR1Q96AQ8 359 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 TESCQ96BS2 214 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 ADAT3Q96EY9 351 aaPredicted RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 SLC25A44Q96H78 314 aaPredicted RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 REEP6Q96HR9 211 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 PPP3R2Q96LZ3 170 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 IGF2BP2-AS1Q96M15 143 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 Q96MT0 163 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 C18orf15Q96N68 181 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 CCDC115Q96NT0 180 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 SCGB3A2Q96PL1 93 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 ERMAPQ96PL5 475 aaPredicted RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 CGREF1Q99674 301 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 PITX2Q99697 317 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 NIPSNAP1Q9BPW8 284 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 TM2D3Q9BRN9 247 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 PARD6GQ9BYG4 376 aaPredicted RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 ANKRD60Q9BZ19 345 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 BCL2L14Q9BZR8 327 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 ABCG5Q9H222 651 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 TXNIPQ9H3M7 391 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 FBXL15Q9H469 300 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 PLEKHA1Q9HB21 404 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 NEK6Q9HC98 313 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 GPR84Q9NQS5 396 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM100Q9NV29 134 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 FGFR1OP2Q9NVK5 253 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 CMTM6Q9NX76 183 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 PAQR5Q9NXK6 330 aaPredicted RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 TAS2R4Q9NYW5 299 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 AHSPQ9NZD4 102 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 LRP1BQ9NZR2 4599 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 EXTL2Q9UBQ6 330 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 CYB5R1Q9UHQ9 305 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 KLK5Q9Y337 293 aaPredicted RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 UTP11Q9Y3A2 253 aaKnown RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 RHBDD3Q9Y3P4 386 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 SAMHD1Q9Y3Z3 626 aaKnown RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 IER3IP1Q9Y5U9 82 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 KPTNQ9Y664 436 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 USH1CQ9Y6N9 552 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 HSPE1-MOB4S4R3N1 261 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 DNAH8Q96JB1 4490 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 RNF213Q63HN8 5207 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 FSIP2Q5CZC0 6907 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 VPS13BQ7Z7G8 4022 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 LRP1Q07954 4544 aaKnown RBP0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 MUC2Q02817 5179 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 A0A096LPI6 279 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 TRBV9A0A0B4J1U6 114 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 IGKV1-9A0A0C4DH69 117 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 A0A0G2JND7 137 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 A0A1B0GW64 132 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 DHRS12A0PJE2 317 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM114B3SHH9 223 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 ANKRD65E5RJM6 399 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 H0YJX3 145 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 J3QT63 122 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 M0QX08 132 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 WRBO00258 174 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 FAAHO00519 579 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 CXCR6O00574 342 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 OVOL1O14753 267 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 XRCC2O43543 280 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 NDUFB3O43676 98 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 SYNGR2O43760 224 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 NOS1APO75052 506 aaPredicted RBP0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 MPDU1O75352 247 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 ENTPD6O75354 484 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF737O75373 536 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 NDUFB2O95178 105 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 KRT75O95678 551 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 OR2H2O95918 312 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 PTTG1O95997 202 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 CXorf1O96002 111 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 HAND1O96004 215 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 LHBP01229 141 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 PRM2P04554 102 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 CD14P08571 375 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 CST2P09228 141 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 SEC11BP0C7V7 166 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 UBCP0CG48 685 aaKnown RBP0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 SAA2P0DJI9 122 aaPredicted RBP0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 PTHLHP12272 177 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 HRES1P13985 223 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 IDO1P14902 403 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 SPI1P17947 270 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 RAB4AP20338 218 aa0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 CFL1P23528 166 aaKnown RBP0.5□□□□□ -2.33
SMARCB1-209ENST00000635578 CDK2P24941 298 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms