RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 AGRNO00468 2067 aa9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 CRYM-AS1A6NIL9 109 aa9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 DISC1C4P0D8 188 aa9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 CTDSPLO15194 276 aa9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 IFNA4P05014 189 aa9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 GIG44P09565 113 aaPredicted RBP9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 IGLC1P0CG04 106 aa9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 SPP1P10451 314 aa9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 SLC25A4P12235 298 aa9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 YPEL3P61236 119 aaPredicted RBP9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 TIGITQ495A1 244 aa9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 Q8NAQ8 132 aa9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 STXBP6Q8NFX7 210 aa9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 RNASEH2CQ8TDP1 164 aaKnown RBP9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 DCANP1Q8TF63 244 aa9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 GPR146Q96CH1 333 aa9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 HRH4Q9H3N8 390 aa9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 CACFD1Q9UGQ2 172 aa9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 GPR132Q9UNW8 380 aa9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 TMEM56-RWDD3S4R434 201 aa9.08□□□□□ -0.96
SOX2-OT-247ENST00000628347 CTDSP2O14595 271 aa9.07□□□□□ -0.96
SOX2-OT-247ENST00000628347 AKAIN1P0CW23 69 aa9.07□□□□□ -0.96
SOX2-OT-247ENST00000628347 ALDH3B2P48448 385 aa9.07□□□□□ -0.96
SOX2-OT-247ENST00000628347 EIF2B2P49770 351 aaKnown RBP9.07□□□□□ -0.96
SOX2-OT-247ENST00000628347 FAAP20Q6NZ36 180 aa9.07□□□□□ -0.96
SOX2-OT-247ENST00000628347 PRSS54Q6PEW0 395 aa9.07□□□□□ -0.96
SOX2-OT-247ENST00000628347 C16orf54Q6UWD8 224 aa9.07□□□□□ -0.96
SOX2-OT-247ENST00000628347 OR4C16Q8NGL9 310 aa9.07□□□□□ -0.96
SOX2-OT-247ENST00000628347 GLMPQ8WWB7 406 aa9.07□□□□□ -0.96
SOX2-OT-247ENST00000628347 IL22RA2Q969J5 263 aa9.07□□□□□ -0.96
SOX2-OT-247ENST00000628347 MRPS26Q9BYN8 205 aaKnown RBP9.07□□□□□ -0.96
SOX2-OT-247ENST00000628347 HEYLQ9NQ87 328 aaPredicted RBP9.07□□□□□ -0.96
SOX2-OT-247ENST00000628347 CACNG5Q9UF02 275 aa9.07□□□□□ -0.96
SOX2-OT-247ENST00000628347 FBXL17Q9UF56 701 aa9.07□□□□□ -0.96
SOX2-OT-247ENST00000628347 FAT2Q9NYQ8 4349 aa9.07□□□□□ -0.96
SOX2-OT-247ENST00000628347 HELTA6NFD8 242 aa9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 ZNF705EA8MWA4 302 aaPredicted RBP9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 C11orf94C9JXX5 98 aa9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 RGS5O15539 181 aa9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 HNRNPCP07910 306 aaKnown RBP eCLIP9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 OR10J1P30954 320 aa9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 RND2P52198 227 aa9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 AP2S1P53680 142 aaPredicted RBP9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 TMEM268Q5VZI3 342 aa9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 ETFRF1Q6IPR1 90 aa9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 GPR141Q7Z602 305 aa9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 NOXA1Q86UR1 476 aa9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 RPP25LQ8N5L8 163 aaKnown RBP9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 SLC24A4Q8NFF2 622 aa9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 C2CD4CQ8TF44 421 aa9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 Q8WTZ3 238 aa9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 TMEM170AQ8WVE7 144 aa9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 PRRT1Q99946 306 aa9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 SEPSECSQ9HD40 501 aaKnown RBP9.06□□□□□ -0.96
SOX2-OT-247ENST00000628347 CEBPZOSA8MTT3 80 aa9.05□□□□□ -0.96
SOX2-OT-247ENST00000628347 ZNF688P0C7X2 276 aa9.05□□□□□ -0.96
SOX2-OT-247ENST00000628347 MIFP14174 115 aa9.05□□□□□ -0.96
SOX2-OT-247ENST00000628347 C4BPBP20851 252 aa9.05□□□□□ -0.96
SOX2-OT-247ENST00000628347 SPCS2Q15005 226 aa9.05□□□□□ -0.96
SOX2-OT-247ENST00000628347 NMSQ5H8A3 153 aa9.05□□□□□ -0.96
SOX2-OT-247ENST00000628347 IGHV4-28A0A0C4DH34 117 aa9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 ANKRD20A5PA0PJZ0 165 aa9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 KNCNA6PVL3 124 aa9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 DEFB4AO15263 64 aa9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 GSTZ1O43708 216 aaPredicted RBP9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 DEDDO75618 318 aa9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 TOMM40O96008 361 aa9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 RBMY1A1P0DJD3 496 aaKnown RBP9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 RBMY1CP0DJD4 496 aa9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 SULT1A3P0DMM9 295 aa9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 SULT1A4P0DMN0 295 aa9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 NPY1RP25929 384 aa9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 DHRS2Q13268 280 aa9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 RBMY1FQ15415 496 aaKnown RBP9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 CSNK1G2-AS1Q8NCQ2 148 aa9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 OR51S1Q8NGJ8 323 aa9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 DIRAS2Q96HU8 199 aa9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 BCL7BQ9BQE9 202 aa9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 CCDC59Q9P031 241 aaKnown RBP9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 KCNIP3Q9Y2W7 256 aa9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 X6R8D5 127 aa9.04□□□□□ -0.96
SOX2-OT-247ENST00000628347 BUB3O43684 328 aa9.03□□□□□ -0.96
SOX2-OT-247ENST00000628347 NXPH3O95157 252 aa9.03□□□□□ -0.96
SOX2-OT-247ENST00000628347 IL4P05112 153 aa9.03□□□□□ -0.96
SOX2-OT-247ENST00000628347 IL18Q14116 193 aa9.03□□□□□ -0.96
SOX2-OT-247ENST00000628347 USF2Q15853 346 aaPredicted RBP9.03□□□□□ -0.96
SOX2-OT-247ENST00000628347 ACTL10Q5JWF8 245 aa9.03□□□□□ -0.96
SOX2-OT-247ENST00000628347 CLVS1Q8IUQ0 354 aaPredicted RBP9.03□□□□□ -0.96
SOX2-OT-247ENST00000628347 DYNC2LI1Q8TCX1 351 aa9.03□□□□□ -0.96
SOX2-OT-247ENST00000628347 RAB2BQ8WUD1 216 aa9.03□□□□□ -0.96
SOX2-OT-247ENST00000628347 NPIPB3Q92617 1050 aa9.03□□□□□ -0.96
SOX2-OT-247ENST00000628347 SCGB3A2Q96PL1 93 aa9.03□□□□□ -0.96
SOX2-OT-247ENST00000628347 RAB40CQ96S21 281 aa9.03□□□□□ -0.96
SOX2-OT-247ENST00000628347 HSPB7Q9UBY9 170 aa9.03□□□□□ -0.96
SOX2-OT-247ENST00000628347 SCP2D1Q9UJQ7 156 aa9.03□□□□□ -0.96
SOX2-OT-247ENST00000628347 APLNQ9ULZ1 77 aa9.03□□□□□ -0.96
SOX2-OT-247ENST00000628347 U3KQ87 197 aa9.03□□□□□ -0.96
SOX2-OT-247ENST00000628347 A0A0B4J2A0 478 aa9.02□□□□□ -0.97
SOX2-OT-247ENST00000628347 FAM90A26D6RGX4 464 aa9.02□□□□□ -0.97
SOX2-OT-247ENST00000628347 CCR6P51684 374 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms