RNA–Protein interactions for RNA: ENST00000623219.3

LINC00643-205, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 962 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-205ENST00000623219 APOHP02749 345 aaPredicted RBP10.98□□□□□ -0.65
LINC00643-205ENST00000623219 IGLC1P0CG04 106 aa10.98□□□□□ -0.65
LINC00643-205ENST00000623219 VAMP1P23763 118 aa10.98□□□□□ -0.65
LINC00643-205ENST00000623219 RND2P52198 227 aa10.98□□□□□ -0.65
LINC00643-205ENST00000623219 ZFAND6Q6FIF0 208 aa10.98□□□□□ -0.65
LINC00643-205ENST00000623219 KIR2DL5AQ8N109 375 aa10.98□□□□□ -0.65
LINC00643-205ENST00000623219 CENPSQ8N2Z9 138 aa10.98□□□□□ -0.65
LINC00643-205ENST00000623219 OR1S1Q8NH92 325 aa10.98□□□□□ -0.65
LINC00643-205ENST00000623219 KIR2DL5BQ8NHK3 375 aa10.98□□□□□ -0.65
LINC00643-205ENST00000623219 IL17DQ8TAD2 202 aa10.98□□□□□ -0.65
LINC00643-205ENST00000623219 METTL26Q96S19 204 aa10.98□□□□□ -0.65
LINC00643-205ENST00000623219 RBKSQ9H477 322 aa10.98□□□□□ -0.65
LINC00643-205ENST00000623219 MAP6D1Q9H9H5 199 aa10.98□□□□□ -0.65
LINC00643-205ENST00000623219 TP53TG1Q9Y2A0 90 aa10.98□□□□□ -0.65
LINC00643-205ENST00000623219 U3KQ87 197 aa10.98□□□□□ -0.65
LINC00643-205ENST00000623219 SACSQ9NZJ4 4579 aa10.97□□□□□ -0.65
LINC00643-205ENST00000623219 UBE2CO00762 179 aa10.97□□□□□ -0.65
LINC00643-205ENST00000623219 IFNA10P01566 189 aa10.97□□□□□ -0.65
LINC00643-205ENST00000623219 SLC25A6P12236 298 aa10.97□□□□□ -0.65
LINC00643-205ENST00000623219 NPPCP23582 126 aa10.97□□□□□ -0.65
LINC00643-205ENST00000623219 CRYBB3P26998 211 aa10.97□□□□□ -0.65
LINC00643-205ENST00000623219 OR10J1P30954 320 aa10.97□□□□□ -0.65
LINC00643-205ENST00000623219 TFPI2P48307 235 aa10.97□□□□□ -0.65
LINC00643-205ENST00000623219 INPP1P49441 399 aa10.97□□□□□ -0.65
LINC00643-205ENST00000623219 TIGITQ495A1 244 aa10.97□□□□□ -0.65
LINC00643-205ENST00000623219 TRIQKQ629K1 86 aa10.97□□□□□ -0.65
LINC00643-205ENST00000623219 Q6ZWC4 215 aa10.97□□□□□ -0.65
LINC00643-205ENST00000623219 NARS2Q96I59 477 aaKnown RBP10.97□□□□□ -0.65
LINC00643-205ENST00000623219 OVOL2Q9BRP0 275 aa10.97□□□□□ -0.65
LINC00643-205ENST00000623219 IGHV3-66A0A0C4DH42 116 aa10.96□□□□□ -0.65
LINC00643-205ENST00000623219 NAP1L6A6NFF2 107 aa10.96□□□□□ -0.65
LINC00643-205ENST00000623219 DFFBO76075 338 aa10.96□□□□□ -0.65
LINC00643-205ENST00000623219 SFT2D2O95562 160 aa10.96□□□□□ -0.65
LINC00643-205ENST00000623219 ATP5IP56385 69 aaPredicted RBP10.96□□□□□ -0.65
LINC00643-205ENST00000623219 UBE2MP61081 183 aaKnown RBP10.96□□□□□ -0.65
LINC00643-205ENST00000623219 YPEL3P61236 119 aaPredicted RBP10.96□□□□□ -0.65
LINC00643-205ENST00000623219 PPP1R1AQ13522 171 aa10.96□□□□□ -0.65
LINC00643-205ENST00000623219 DEFB135Q30KP9 77 aa10.96□□□□□ -0.65
LINC00643-205ENST00000623219 WFDC3Q8IUB2 231 aa10.96□□□□□ -0.65
LINC00643-205ENST00000623219 APRG1Q8IVJ8 170 aa10.96□□□□□ -0.65
LINC00643-205ENST00000623219 GBGT1Q8N5D6 347 aa10.96□□□□□ -0.65
LINC00643-205ENST00000623219 MS4A6AQ9H2W1 248 aa10.96□□□□□ -0.65
LINC00643-205ENST00000623219 TMED3Q9Y3Q3 217 aa10.96□□□□□ -0.65
LINC00643-205ENST00000623219 RYR2Q92736 4967 aa10.96□□□□□ -0.66
LINC00643-205ENST00000623219 FAM90A26D6RGX4 464 aa10.95□□□□□ -0.66
LINC00643-205ENST00000623219 DNASE2O00115 360 aaPredicted RBP10.95□□□□□ -0.66
LINC00643-205ENST00000623219 PITX3O75364 302 aa10.95□□□□□ -0.66
LINC00643-205ENST00000623219 P2RY1P47900 373 aa10.95□□□□□ -0.66
LINC00643-205ENST00000623219 RPL11P62913 178 aaKnown RBP10.95□□□□□ -0.66
LINC00643-205ENST00000623219 LILRB2Q8N423 598 aa10.95□□□□□ -0.66
LINC00643-205ENST00000623219 STPG3Q8N7X2 389 aa10.95□□□□□ -0.66
LINC00643-205ENST00000623219 Q8WTZ3 238 aa10.95□□□□□ -0.66
LINC00643-205ENST00000623219 GRAMD2BQ96HH9 432 aa10.95□□□□□ -0.66
LINC00643-205ENST00000623219 NDUFB6O95139 128 aa10.94□□□□□ -0.66
LINC00643-205ENST00000623219 TOMM40O96008 361 aa10.94□□□□□ -0.66
LINC00643-205ENST00000623219 HNRNPCP07910 306 aaKnown RBP eCLIP10.94□□□□□ -0.66
LINC00643-205ENST00000623219 RPL35AP18077 110 aaKnown RBP10.94□□□□□ -0.66
LINC00643-205ENST00000623219 BAK1Q16611 211 aa10.94□□□□□ -0.66
LINC00643-205ENST00000623219 NPIPB3Q92617 1050 aa10.94□□□□□ -0.66
LINC00643-205ENST00000623219 ACY3Q96HD9 319 aa10.94□□□□□ -0.66
LINC00643-205ENST00000623219 SPRY2O43597 315 aa10.93□□□□□ -0.66
LINC00643-205ENST00000623219 MED6O75586 246 aa10.93□□□□□ -0.66
LINC00643-205ENST00000623219 IFNA4P05014 189 aa10.93□□□□□ -0.66
LINC00643-205ENST00000623219 IL4P05112 153 aa10.93□□□□□ -0.66
LINC00643-205ENST00000623219 EIF2B2P49770 351 aaKnown RBP10.93□□□□□ -0.66
LINC00643-205ENST00000623219 ZNF124Q15973 351 aa10.93□□□□□ -0.66
LINC00643-205ENST00000623219 RNF183Q96D59 192 aa10.93□□□□□ -0.66
LINC00643-205ENST00000623219 SDHCQ99643 169 aaPredicted RBP10.93□□□□□ -0.66
LINC00643-205ENST00000623219 NDUFA13Q9P0J0 144 aa10.93□□□□□ -0.66
LINC00643-205ENST00000623219 RABAC1Q9UI14 185 aa10.93□□□□□ -0.66
LINC00643-205ENST00000623219 U3KQE9 123 aa10.93□□□□□ -0.66
LINC00643-205ENST00000623219 LCE6AA0A183 80 aa10.92□□□□□ -0.66
LINC00643-205ENST00000623219 GPX4P36969 197 aaPredicted RBP10.92□□□□□ -0.66
LINC00643-205ENST00000623219 USF2Q15853 346 aaPredicted RBP10.92□□□□□ -0.66
LINC00643-205ENST00000623219 STXBP6Q8NFX7 210 aa10.92□□□□□ -0.66
LINC00643-205ENST00000623219 SLC35E1Q96K37 410 aa10.92□□□□□ -0.66
LINC00643-205ENST00000623219 CIB3Q96Q77 187 aaPredicted RBP10.92□□□□□ -0.66
LINC00643-205ENST00000623219 C7orf50Q9BRJ6 194 aaKnown RBP10.92□□□□□ -0.66
LINC00643-205ENST00000623219 C9orf170A2RU37 121 aa10.91□□□□□ -0.66
LINC00643-205ENST00000623219 HELTA6NFD8 242 aa10.91□□□□□ -0.66
LINC00643-205ENST00000623219 CENPXA8MT69 81 aa10.91□□□□□ -0.66
LINC00643-205ENST00000623219 K7EQG2 157 aa10.91□□□□□ -0.66
LINC00643-205ENST00000623219 HOXB5P09067 269 aa10.91□□□□□ -0.66
LINC00643-205ENST00000623219 RD3LP0DJH9 198 aa10.91□□□□□ -0.66
LINC00643-205ENST00000623219 IAPPP10997 89 aa10.91□□□□□ -0.66
LINC00643-205ENST00000623219 DEFB131AP59861 70 aa10.91□□□□□ -0.66
LINC00643-205ENST00000623219 RAB11AP62491 216 aa10.91□□□□□ -0.66
LINC00643-205ENST00000623219 C16orf54Q6UWD8 224 aa10.91□□□□□ -0.66
LINC00643-205ENST00000623219 FAM24BQ8N5W8 94 aa10.91□□□□□ -0.66
LINC00643-205ENST00000623219 DCANP1Q8TF63 244 aa10.91□□□□□ -0.66
LINC00643-205ENST00000623219 GLMPQ8WWB7 406 aa10.91□□□□□ -0.66
LINC00643-205ENST00000623219 CSTL1Q9H114 145 aa10.91□□□□□ -0.66
LINC00643-205ENST00000623219 A0A0J9YWU9 116 aa10.9□□□□□ -0.66
LINC00643-205ENST00000623219 ZFP92A6NM28 416 aa10.9□□□□□ -0.66
LINC00643-205ENST00000623219 MPTX1A8MV57 137 aa10.9□□□□□ -0.66
LINC00643-205ENST00000623219 SYNGR2O43760 224 aa10.9□□□□□ -0.66
LINC00643-205ENST00000623219 PSG1P11464 419 aa10.9□□□□□ -0.66
LINC00643-205ENST00000623219 IL7P13232 177 aa10.9□□□□□ -0.66
LINC00643-205ENST00000623219 BTCP35070 178 aa10.9□□□□□ -0.66
LINC00643-205ENST00000623219 NUP62P37198 522 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms