RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 GATAD1Q8WUU5 269 aa16.9■□□□□ 0.3
SPAST-204ENST00000621856 FANCD2OSQ96PS1 177 aa16.9■□□□□ 0.3
SPAST-204ENST00000621856 RNF2Q99496 336 aa16.9■□□□□ 0.3
SPAST-204ENST00000621856 NKX6-2Q9C056 277 aaPredicted RBP16.9■□□□□ 0.3
SPAST-204ENST00000621856 HELZ2Q9BYK8 2649 aaKnown RBP16.89■□□□□ 0.3
SPAST-204ENST00000621856 CSMD2Q7Z408 3487 aa16.89■□□□□ 0.29
SPAST-204ENST00000621856 MDFIC2A0A1B0GVS7 189 aa16.89■□□□□ 0.29
SPAST-204ENST00000621856 SNAPINO95295 136 aa16.89■□□□□ 0.29
SPAST-204ENST00000621856 OR5G3P0C626 314 aa16.89■□□□□ 0.29
SPAST-204ENST00000621856 CYB561D1Q8N8Q1 229 aa16.89■□□□□ 0.29
SPAST-204ENST00000621856 FAM110DQ8TAY7 271 aaPredicted RBP16.89■□□□□ 0.29
SPAST-204ENST00000621856 PFDN5Q99471 154 aa16.89■□□□□ 0.29
SPAST-204ENST00000621856 DNAJC4Q9NNZ3 241 aa16.89■□□□□ 0.29
SPAST-204ENST00000621856 THYN1Q9P016 225 aa16.89■□□□□ 0.29
SPAST-204ENST00000621856 PITPNC1Q9UKF7 332 aa16.89■□□□□ 0.29
SPAST-204ENST00000621856 PAGE4O60829 102 aa16.88■□□□□ 0.29
SPAST-204ENST00000621856 TMEM37Q8WXS4 190 aa16.88■□□□□ 0.29
SPAST-204ENST00000621856 MRPL32Q9BYC8 188 aaKnown RBP16.88■□□□□ 0.29
SPAST-204ENST00000621856 TECRQ9NZ01 308 aaKnown RBP16.88■□□□□ 0.29
SPAST-204ENST00000621856 CLN5O75503 358 aa16.87■□□□□ 0.29
SPAST-204ENST00000621856 IGLC1P0CG04 106 aa16.87■□□□□ 0.29
SPAST-204ENST00000621856 GCHFRP30047 84 aa16.87■□□□□ 0.29
SPAST-204ENST00000621856 MEF2BQ02080 365 aaPredicted RBP16.87■□□□□ 0.29
SPAST-204ENST00000621856 DEFB112Q30KQ8 113 aa16.87■□□□□ 0.29
SPAST-204ENST00000621856 C9orf152Q5JTZ5 239 aa16.87■□□□□ 0.29
SPAST-204ENST00000621856 C10orf113Q5VZT2 155 aa16.87■□□□□ 0.29
SPAST-204ENST00000621856 BCL6BQ8N143 479 aaPredicted RBP16.87■□□□□ 0.29
SPAST-204ENST00000621856 WFDC11Q8NEX6 87 aa16.87■□□□□ 0.29
SPAST-204ENST00000621856 PSMB11A5LHX3 300 aa16.87■□□□□ 0.29
SPAST-204ENST00000621856 LINC01548A6NM66 108 aa16.87■□□□□ 0.29
SPAST-204ENST00000621856 OR2J3O76001 311 aa16.87■□□□□ 0.29
SPAST-204ENST00000621856 AMY1AP04745 511 aa16.87■□□□□ 0.29
SPAST-204ENST00000621856 TAS2R45P59539 299 aa16.87■□□□□ 0.29
SPAST-204ENST00000621856 UBE2G2P60604 165 aa16.87■□□□□ 0.29
SPAST-204ENST00000621856 TMEM68Q96MH6 324 aa16.87■□□□□ 0.29
SPAST-204ENST00000621856 S4R3C0 116 aa16.87■□□□□ 0.29
SPAST-204ENST00000621856 HIST1H1BP16401 226 aaKnown RBP16.86■□□□□ 0.29
SPAST-204ENST00000621856 MFAP4P55083 255 aa16.86■□□□□ 0.29
SPAST-204ENST00000621856 TIGITQ495A1 244 aa16.86■□□□□ 0.29
SPAST-204ENST00000621856 M0QZK8 103 aa16.85■□□□□ 0.29
SPAST-204ENST00000621856 NDUFB8O95169 186 aa16.85■□□□□ 0.29
SPAST-204ENST00000621856 FABP1P07148 127 aa16.85■□□□□ 0.29
SPAST-204ENST00000621856 ORM2P19652 201 aa16.85■□□□□ 0.29
SPAST-204ENST00000621856 NPBWR1P48145 328 aa16.85■□□□□ 0.29
SPAST-204ENST00000621856 OR1B1Q8NGR6 318 aa16.85■□□□□ 0.29
SPAST-204ENST00000621856 ZNF355PQ9NSJ1 428 aa16.85■□□□□ 0.29
SPAST-204ENST00000621856 FBXL7Q9UJT9 491 aa16.85■□□□□ 0.29
SPAST-204ENST00000621856 PRRC2AP48634 2157 aaKnown RBP16.85■□□□□ 0.29
SPAST-204ENST00000621856 FSHBP01225 129 aa16.84■□□□□ 0.29
SPAST-204ENST00000621856 C8orf88P0DMB2 117 aa16.84■□□□□ 0.29
SPAST-204ENST00000621856 CD81P60033 236 aa16.84■□□□□ 0.29
SPAST-204ENST00000621856 BTN1A1Q13410 526 aa16.84■□□□□ 0.29
SPAST-204ENST00000621856 AKIRIN2Q53H80 203 aa16.84■□□□□ 0.29
SPAST-204ENST00000621856 CST9LP1Q5W188 147 aa16.84■□□□□ 0.29
SPAST-204ENST00000621856 PATE2Q6UY27 113 aa16.84■□□□□ 0.29
SPAST-204ENST00000621856 CLRN3Q8NCR9 226 aa16.84■□□□□ 0.29
SPAST-204ENST00000621856 OR4F5Q8NH21 305 aa16.84■□□□□ 0.29
SPAST-204ENST00000621856 OR4F4Q96R69 305 aa16.84■□□□□ 0.29
SPAST-204ENST00000621856 ELOA3CA0A087WX78 387 aaPredicted RBP16.84■□□□□ 0.29
SPAST-204ENST00000621856 G3V318 75 aa16.84■□□□□ 0.29
SPAST-204ENST00000621856 GNG7O60262 68 aa16.84■□□□□ 0.29
SPAST-204ENST00000621856 OR7C2O60412 319 aa16.84■□□□□ 0.29
SPAST-204ENST00000621856 Q56UQ5 140 aa16.84■□□□□ 0.29
SPAST-204ENST00000621856 C16orf82Q7Z2V1 217 aa16.84■□□□□ 0.29
SPAST-204ENST00000621856 C21orf62Q9NYP8 219 aa16.84■□□□□ 0.29
SPAST-204ENST00000621856 PUS1Q9Y606 427 aaKnown RBP eCLIP16.84■□□□□ 0.29
SPAST-204ENST00000621856 C11orf94C9JXX5 98 aa16.83■□□□□ 0.28
SPAST-204ENST00000621856 SMAD7O15105 426 aaKnown RBP16.83■□□□□ 0.28
SPAST-204ENST00000621856 PQLC2Q6ZP29 291 aa16.83■□□□□ 0.28
SPAST-204ENST00000621856 TRAV30A0A087WSZ9 112 aa16.82■□□□□ 0.28
SPAST-204ENST00000621856 M0R036 132 aa16.82■□□□□ 0.28
SPAST-204ENST00000621856 HYPMO75409 117 aa16.82■□□□□ 0.28
SPAST-204ENST00000621856 PSG1P11464 419 aa16.82■□□□□ 0.28
SPAST-204ENST00000621856 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.82■□□□□ 0.28
SPAST-204ENST00000621856 UHRF2Q96PU4 802 aa16.82■□□□□ 0.28
SPAST-204ENST00000621856 TMEM167BQ9NRX6 74 aa16.82■□□□□ 0.28
SPAST-204ENST00000621856 TRAV5A0A0B4J249 113 aa16.82■□□□□ 0.28
SPAST-204ENST00000621856 TRAV41A0A0B4J266 112 aa16.82■□□□□ 0.28
SPAST-204ENST00000621856 IGKV1-17P01599 117 aa16.82■□□□□ 0.28
SPAST-204ENST00000621856 IGHV4-59P01825 116 aa16.82■□□□□ 0.28
SPAST-204ENST00000621856 RD3LP0DJH9 198 aa16.82■□□□□ 0.28
SPAST-204ENST00000621856 LYZP61626 148 aa16.82■□□□□ 0.28
SPAST-204ENST00000621856 KIAA0141Q14154 515 aaPredicted RBP16.82■□□□□ 0.28
SPAST-204ENST00000621856 MORN5Q5VZ52 161 aa16.82■□□□□ 0.28
SPAST-204ENST00000621856 FAM90A2PQ658T7 463 aa16.82■□□□□ 0.28
SPAST-204ENST00000621856 LINC00305Q7Z4B0 112 aa16.82■□□□□ 0.28
SPAST-204ENST00000621856 CIARTQ8N365 385 aaPredicted RBP16.82■□□□□ 0.28
SPAST-204ENST00000621856 SLC25A2Q9BXI2 301 aa16.82■□□□□ 0.28
SPAST-204ENST00000621856 CSPG4Q6UVK1 2322 aa16.81■□□□□ 0.28
SPAST-204ENST00000621856 IGHV3-23P01764 117 aa16.81■□□□□ 0.28
SPAST-204ENST00000621856 ATP5G3P48201 142 aa16.81■□□□□ 0.28
SPAST-204ENST00000621856 OR5AU1Q8NGC0 362 aa16.81■□□□□ 0.28
SPAST-204ENST00000621856 ZNF48Q96MX3 618 aaPredicted RBP16.81■□□□□ 0.28
SPAST-204ENST00000621856 C20orf24Q9BUV8 137 aa16.81■□□□□ 0.28
SPAST-204ENST00000621856 TMEM250H0YL14 139 aa16.8■□□□□ 0.28
SPAST-204ENST00000621856 H3BQ15 152 aa16.8■□□□□ 0.28
SPAST-204ENST00000621856 NDUFS6O75380 124 aaKnown RBP16.8■□□□□ 0.28
SPAST-204ENST00000621856 CRIP2P52943 208 aaPredicted RBP16.8■□□□□ 0.28
SPAST-204ENST00000621856 PLP1P60201 277 aa16.8■□□□□ 0.28
SPAST-204ENST00000621856 RHOGP84095 191 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms