RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 CHCHD2Q9Y6H1 151 aaPredicted RBP8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 IGLV3-32A0A0A0MS00 114 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 CRXO43186 299 aaPredicted RBP8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 P01737 135 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 FCGR2BP31994 310 aaPredicted RBP8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 FAM120AOSQ5T036 256 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 CCDC144NLQ6NUI1 221 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 Q6P435 159 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 FADS6Q8N9I5 356 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 WIPF2Q8TF74 440 aaPredicted RBP8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 SLC25A5P05141 298 aaKnown RBP8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 CELA3AP09093 270 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 C8orf88P0DMB2 117 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 PYYP10082 97 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 LIFP15018 202 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 FCER1GP30273 86 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 FOLR3P41439 243 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 FXYD7P58549 80 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 ATP5G2Q06055 141 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 WFDC2Q14508 124 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 S1PR3Q99500 378 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 FAM173AQ9BQD7 235 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 LOXL2Q9Y4K0 774 aa8.5□□□□□ -1.05
TNFAIP3-208ENST00000615468 C10orf142B7Z368 130 aa8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 OR2J3O76001 311 aa8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 P0C879 139 aa8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 HOXA4Q00056 320 aaPredicted RBP8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 TMEM177Q53S58 311 aa8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 NEU4Q8WWR8 484 aaPredicted RBP8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 RTL8AQ9BWD3 113 aa8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 COL25A1Q9BXS0 654 aaPredicted RBP8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 TMEM140Q9NV12 185 aa8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 KBTBD11-OT1A0A1B0GTJ5 212 aa8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 C19orf24Q9BVV8 132 aa8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 SMPXQ9UHP9 88 aa8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 POLDIP2Q9Y2S7 368 aa8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 INTS1Q8N201 2190 aaKnown RBP8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 TPRP12270 2363 aaKnown RBP8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 PLCE1Q9P212 2302 aa8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 K7ERJ3 54 aa8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 SPINT2O43291 252 aa8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 MT-CO3P00414 261 aa8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 DCTN5Q9BTE1 182 aa8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 NHP2Q9NX24 153 aaKnown RBP8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 MPC1Q9Y5U8 109 aa8.49□□□□□ -1.05
TNFAIP3-208ENST00000615468 SPTA1P02549 2419 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 SERTM2A0A1B0GWG4 89 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 OOEPA6NGQ2 149 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 PEX7O00628 323 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 PSPNO60542 156 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 NCR2O95944 276 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 MYOD1P15172 320 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 FOXF2Q12947 444 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 ARPC1AQ92747 370 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 MRAP2Q96G30 205 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 B4GALT7Q9UBV7 327 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 SLC25A10Q9UBX3 287 aaPredicted RBP8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 SS18L2Q9UHA2 77 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 COL4A2P08572 1712 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 LRP4O75096 1905 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 FOXG1P55316 489 aaPredicted RBP8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 CACNG7P62955 275 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 WFDC3Q8IUB2 231 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 ZADH2Q8N4Q0 377 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 IGF2BP2-AS1Q96M15 143 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 ARFGEF3Q5TH69 2177 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 K7EMI3 77 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 COX7A2P2O60397 106 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 MLANAQ16655 118 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 RPL39P5Q59GN2 51 aa8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 RPS19BP1Q86WX3 136 aaKnown RBP8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 BCL6BQ8N143 479 aaPredicted RBP8.48□□□□□ -1.05
TNFAIP3-208ENST00000615468 ZNF716A6NP11 495 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 IGHV3-48P01763 117 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 ZNF826PQ6ZT77 177 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 OR9G1Q8NH87 305 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 OBP2BQ9NPH6 170 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 VWC2LB2RUY7 222 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 H3BTX0 84 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 WNT9BO14905 357 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 SMAD7O15105 426 aaKnown RBP8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 CYC1P08574 325 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 LINC01545Q5VT33 79 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 PCP2Q8IVA1 136 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 VGLL1Q99990 258 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 PAXXQ9BUH6 204 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 C1RLQ9NZP8 487 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 SLC25A17O43808 307 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 FAM87AP0C7U9 286 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 VDAC2P45880 294 aaPredicted RBP8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 SSR4P51571 173 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 ATP5L2Q7Z4Y8 100 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 OR4X2Q8NGF9 303 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 FAM222BQ8WU58 562 aa8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 KLF13Q9Y2Y9 288 aaPredicted RBP8.47□□□□□ -1.05
TNFAIP3-208ENST00000615468 COL8A1P27658 744 aa8.46□□□□□ -1.05
TNFAIP3-208ENST00000615468 PLGLB1Q02325 96 aa8.46□□□□□ -1.05
TNFAIP3-208ENST00000615468 AMTNQ6UX39 209 aa8.46□□□□□ -1.05
TNFAIP3-208ENST00000615468 ZNF503Q96F45 646 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms