RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 CIARTQ8N365 385 aaPredicted RBP10.23□□□□□ -0.77
CDH1-212ENST00000611625 PMCHL2Q9BQD1 86 aa10.23□□□□□ -0.77
CDH1-212ENST00000611625 LMO1P25800 156 aa10.22□□□□□ -0.77
CDH1-212ENST00000611625 OR10J6PQ8NGY7 276 aa10.22□□□□□ -0.77
CDH1-212ENST00000611625 C21orf62Q9NYP8 219 aa10.22□□□□□ -0.77
CDH1-212ENST00000611625 NUDT3O95989 172 aa10.22□□□□□ -0.77
CDH1-212ENST00000611625 IGHG3P01860 377 aa10.22□□□□□ -0.77
CDH1-212ENST00000611625 Q6AWC8 147 aa10.22□□□□□ -0.77
CDH1-212ENST00000611625 WDR86Q86TI4 376 aa10.22□□□□□ -0.77
CDH1-212ENST00000611625 TSKUQ8WUA8 353 aa10.22□□□□□ -0.77
CDH1-212ENST00000611625 RAB37Q96AX2 223 aa10.22□□□□□ -0.77
CDH1-212ENST00000611625 INTS1Q8N201 2190 aaKnown RBP10.22□□□□□ -0.77
CDH1-212ENST00000611625 FBLL1A6NHQ2 334 aaKnown RBP10.22□□□□□ -0.77
CDH1-212ENST00000611625 NDUFS6O75380 124 aaKnown RBP10.22□□□□□ -0.77
CDH1-212ENST00000611625 WFDC3Q8IUB2 231 aa10.22□□□□□ -0.77
CDH1-212ENST00000611625 BEND2Q8NDZ0 799 aa10.22□□□□□ -0.77
CDH1-212ENST00000611625 ZNF414Q96IQ9 312 aa10.22□□□□□ -0.77
CDH1-212ENST00000611625 ZNF664Q8N3J9 261 aa10.22□□□□□ -0.77
CDH1-212ENST00000611625 FABP2P12104 132 aa10.21□□□□□ -0.77
CDH1-212ENST00000611625 ERVK11-1P61568 191 aa10.21□□□□□ -0.77
CDH1-212ENST00000611625 A0A1B0GW15 77 aa10.21□□□□□ -0.77
CDH1-212ENST00000611625 HAPLN4Q86UW8 402 aa10.21□□□□□ -0.77
CDH1-212ENST00000611625 Q8NFD4 153 aa10.21□□□□□ -0.77
CDH1-212ENST00000611625 NUDT10Q8NFP7 164 aa10.21□□□□□ -0.77
CDH1-212ENST00000611625 NUDT11Q96G61 164 aa10.21□□□□□ -0.77
CDH1-212ENST00000611625 IGHV3OR16-13A0A075B7E8 117 aa10.21□□□□□ -0.78
CDH1-212ENST00000611625 TRAV9-2A0A087WT02 112 aa10.21□□□□□ -0.78
CDH1-212ENST00000611625 IGHV3-74A0A0B4J1X5 117 aa10.21□□□□□ -0.78
CDH1-212ENST00000611625 MUC21A0A0G2JKD1 596 aa10.21□□□□□ -0.78
CDH1-212ENST00000611625 MUC21A0A140T8X8 626 aa10.21□□□□□ -0.78
CDH1-212ENST00000611625 IGHV3-23P01764 117 aa10.21□□□□□ -0.78
CDH1-212ENST00000611625 MUC21Q5SSG8 566 aa10.21□□□□□ -0.78
CDH1-212ENST00000611625 F11RQ9Y624 299 aaKnown RBP10.21□□□□□ -0.78
CDH1-212ENST00000611625 DKK1O94907 266 aa10.21□□□□□ -0.78
CDH1-212ENST00000611625 FAM53AQ6NSI3 398 aaPredicted RBP10.21□□□□□ -0.78
CDH1-212ENST00000611625 KIAA1549LQ6ZVL6 1849 aa10.2□□□□□ -0.78
CDH1-212ENST00000611625 NCOA6Q14686 2063 aaPredicted RBP10.2□□□□□ -0.78
CDH1-212ENST00000611625 PF4V1P10720 104 aa10.2□□□□□ -0.78
CDH1-212ENST00000611625 ST6GALNAC3Q8NDV1 305 aa10.2□□□□□ -0.78
CDH1-212ENST00000611625 CD33P20138 364 aa10.2□□□□□ -0.78
CDH1-212ENST00000611625 TMEM167AQ8TBQ9 72 aa10.2□□□□□ -0.78
CDH1-212ENST00000611625 RNASE6Q93091 150 aaKnown RBP10.2□□□□□ -0.78
CDH1-212ENST00000611625 FBXL7Q9UJT9 491 aa10.2□□□□□ -0.78
CDH1-212ENST00000611625 A0A1W2PS18 150 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 ZNF207O43670 478 aaKnown RBP10.19□□□□□ -0.78
CDH1-212ENST00000611625 NPPCP23582 126 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 TMPRSS3P57727 454 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 ZNF502Q8TBZ5 544 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 ARPC1AQ92747 370 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 COL6A6A6NMZ7 2263 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 TRBV20OR9-2A0A075B6H5 130 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 A1L4Q6 167 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 C7orf71A4D174 169 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 NBR2O15453 112 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 IGHV2-70P01814 119 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 ID1P41134 155 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 PVRIGQ6DKI7 326 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 Q6ZSR3 168 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 ATP5L2Q7Z4Y8 100 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 RNF125Q96EQ8 232 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 GAFA1Q96PS6 74 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 SNAI2O43623 268 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 DLX6P56179 175 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 C18orf15Q96N68 181 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 PLA2G2EQ9NZK7 142 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 KLF2Q9Y5W3 355 aaPredicted RBP10.19□□□□□ -0.78
CDH1-212ENST00000611625 IGHV3OR16-8A0A075B7F1 116 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 LURAP1LQ8IV03 231 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 ORMDL3Q8N138 153 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 PEF1Q9UBV8 284 aaKnown RBP10.19□□□□□ -0.78
CDH1-212ENST00000611625 PHLDA3Q9Y5J5 127 aa10.19□□□□□ -0.78
CDH1-212ENST00000611625 C2orf16Q68DN1 1984 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 MBD3L4A6NDZ8 208 aaPredicted RBP10.18□□□□□ -0.78
CDH1-212ENST00000611625 MBD3L3A6NE82 208 aaPredicted RBP10.18□□□□□ -0.78
CDH1-212ENST00000611625 MBD3L5A6NJ08 208 aaPredicted RBP10.18□□□□□ -0.78
CDH1-212ENST00000611625 TMEM200BQ69YZ2 307 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 MBD3L2Q8NHZ7 208 aaPredicted RBP10.18□□□□□ -0.78
CDH1-212ENST00000611625 C2orf88Q9BSF0 95 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 TMEM208Q9BTX3 173 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 LTBP2Q14767 1821 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.18□□□□□ -0.78
CDH1-212ENST00000611625 LINC00614P0C842 121 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 NUTF2P61970 127 aaKnown RBP10.18□□□□□ -0.78
CDH1-212ENST00000611625 TM4SF20Q53R12 229 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 EEF1AKMT3Q96AZ1 226 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 LYNX1G3V0Z9 82 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 LYNX1P0DP58 116 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 HTN1P15515 57 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 PSMB2P49721 201 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 SRSF6Q13247 344 aaKnown RBP10.18□□□□□ -0.78
CDH1-212ENST00000611625 SLC25A48Q6ZT89 311 aaKnown RBP10.18□□□□□ -0.78
CDH1-212ENST00000611625 PSG8Q9UQ74 426 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 FNDC10F2Z333 226 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 H0YJW9 148 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 IGKV1-16P04430 117 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 RNASE2P10153 161 aaKnown RBP10.18□□□□□ -0.78
CDH1-212ENST00000611625 TFPI2P48307 235 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 ATP5G2Q06055 141 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 PRSS8Q16651 343 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 Q6ZR03 302 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms