RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 STXBP6Q8NFX7 210 aa12.46□□□□□ -0.41
SMG9-210ENST00000600097 NARS2Q96I59 477 aaKnown RBP12.46□□□□□ -0.41
SMG9-210ENST00000600097 IGHV4-4A0A075B6R2 117 aa12.45□□□□□ -0.42
SMG9-210ENST00000600097 CRYBB3P26998 211 aa12.45□□□□□ -0.42
SMG9-210ENST00000600097 INPP1P49441 399 aa12.45□□□□□ -0.42
SMG9-210ENST00000600097 PPP5CP53041 499 aa12.45□□□□□ -0.42
SMG9-210ENST00000600097 RND3P61587 244 aa12.45□□□□□ -0.42
SMG9-210ENST00000600097 SPINK9Q5DT21 86 aa12.45□□□□□ -0.42
SMG9-210ENST00000600097 PVRIGQ6DKI7 326 aa12.45□□□□□ -0.42
SMG9-210ENST00000600097 FAAP20Q6NZ36 180 aa12.45□□□□□ -0.42
SMG9-210ENST00000600097 LINC00299Q6ZSB3 139 aa12.45□□□□□ -0.42
SMG9-210ENST00000600097 SCGB3A2Q96PL1 93 aa12.45□□□□□ -0.42
SMG9-210ENST00000600097 RNF126Q9BV68 326 aa12.45□□□□□ -0.42
SMG9-210ENST00000600097 MCUBQ9NWR8 336 aa12.45□□□□□ -0.42
SMG9-210ENST00000600097 COPZ2Q9P299 210 aa12.45□□□□□ -0.42
SMG9-210ENST00000600097 C14orf166Q9Y224 244 aaKnown RBP12.45□□□□□ -0.42
SMG9-210ENST00000600097 X6R8D5 127 aa12.45□□□□□ -0.42
SMG9-210ENST00000600097 CLN5O75503 358 aa12.44□□□□□ -0.42
SMG9-210ENST00000600097 ATG12O94817 140 aa12.44□□□□□ -0.42
SMG9-210ENST00000600097 IFNA17P01571 189 aa12.44□□□□□ -0.42
SMG9-210ENST00000600097 ZNF688P0C7X2 276 aa12.44□□□□□ -0.42
SMG9-210ENST00000600097 P2RY1P47900 373 aa12.44□□□□□ -0.42
SMG9-210ENST00000600097 PIGPP57054 158 aa12.44□□□□□ -0.42
SMG9-210ENST00000600097 OR51S1Q8NGJ8 323 aa12.44□□□□□ -0.42
SMG9-210ENST00000600097 MARCH1Q8TCQ1 289 aa12.44□□□□□ -0.42
SMG9-210ENST00000600097 PDCD10Q9BUL8 212 aa12.44□□□□□ -0.42
SMG9-210ENST00000600097 SRRQ9GZT4 340 aa12.44□□□□□ -0.42
SMG9-210ENST00000600097 TBC1D24Q9ULP9 559 aa12.44□□□□□ -0.42
SMG9-210ENST00000600097 PCLOQ9Y6V0 5065 aa12.44□□□□□ -0.42
SMG9-210ENST00000600097 VPS13DQ5THJ4 4388 aa12.44□□□□□ -0.42
SMG9-210ENST00000600097 B3GALNT1O75752 331 aa12.43□□□□□ -0.42
SMG9-210ENST00000600097 C4BPBP20851 252 aa12.43□□□□□ -0.42
SMG9-210ENST00000600097 EIF2B2P49770 351 aaKnown RBP12.43□□□□□ -0.42
SMG9-210ENST00000600097 AKR1C2P52895 323 aa12.43□□□□□ -0.42
SMG9-210ENST00000600097 IZUMO4Q1ZYL8 232 aa12.43□□□□□ -0.42
SMG9-210ENST00000600097 CNPY1Q3B7I2 92 aa12.43□□□□□ -0.42
SMG9-210ENST00000600097 OR13C8Q8NGS7 320 aa12.43□□□□□ -0.42
SMG9-210ENST00000600097 OR4X1Q8NH49 305 aa12.43□□□□□ -0.42
SMG9-210ENST00000600097 DCANP1Q8TF63 244 aa12.43□□□□□ -0.42
SMG9-210ENST00000600097 TRIM63Q969Q1 353 aa12.43□□□□□ -0.42
SMG9-210ENST00000600097 TMEM230Q96A57 120 aa12.43□□□□□ -0.42
SMG9-210ENST00000600097 KIAA1109Q2LD37 5005 aa12.43□□□□□ -0.42
SMG9-210ENST00000600097 ELOA3CA0A087WX78 387 aaPredicted RBP12.42□□□□□ -0.42
SMG9-210ENST00000600097 A0A0B4J293 547 aa12.42□□□□□ -0.42
SMG9-210ENST00000600097 KNCNA6PVL3 124 aa12.42□□□□□ -0.42
SMG9-210ENST00000600097 IGKV1-5P01602 117 aa12.42□□□□□ -0.42
SMG9-210ENST00000600097 RNASE2P10153 161 aaKnown RBP12.42□□□□□ -0.42
SMG9-210ENST00000600097 PI3P19957 117 aa12.42□□□□□ -0.42
SMG9-210ENST00000600097 OPRK1P41145 380 aa12.42□□□□□ -0.42
SMG9-210ENST00000600097 KLF9Q13886 244 aaPredicted RBP12.42□□□□□ -0.42
SMG9-210ENST00000600097 ACTL10Q5JWF8 245 aa12.42□□□□□ -0.42
SMG9-210ENST00000600097 TRIQKQ629K1 86 aa12.42□□□□□ -0.42
SMG9-210ENST00000600097 CSNK1G2-AS1Q8NCQ2 148 aa12.42□□□□□ -0.42
SMG9-210ENST00000600097 FNDC4Q9H6D8 234 aaPredicted RBP12.42□□□□□ -0.42
SMG9-210ENST00000600097 ENY2Q9NPA8 101 aa12.42□□□□□ -0.42
SMG9-210ENST00000600097 TRAV30A0A087WSZ9 112 aa12.41□□□□□ -0.42
SMG9-210ENST00000600097 HELTA6NFD8 242 aa12.41□□□□□ -0.42
SMG9-210ENST00000600097 AMBPP02760 352 aa12.41□□□□□ -0.42
SMG9-210ENST00000600097 P0C879 139 aa12.41□□□□□ -0.42
SMG9-210ENST00000600097 P0DMU3 169 aa12.41□□□□□ -0.42
SMG9-210ENST00000600097 FAM231AP0DMU4 169 aa12.41□□□□□ -0.42
SMG9-210ENST00000600097 FAM231CP0DMU5 169 aa12.41□□□□□ -0.42
SMG9-210ENST00000600097 HOXA1P49639 335 aaPredicted RBP12.41□□□□□ -0.42
SMG9-210ENST00000600097 C1QTNF4Q9BXJ3 329 aa12.41□□□□□ -0.42
SMG9-210ENST00000600097 GPR132Q9UNW8 380 aa12.41□□□□□ -0.42
SMG9-210ENST00000600097 DEFB131BA0A096LNP1 70 aa12.4□□□□□ -0.42
SMG9-210ENST00000600097 C3orf85A0A1B0GTC6 90 aa12.4□□□□□ -0.42
SMG9-210ENST00000600097 AP2S1P53680 142 aaPredicted RBP12.4□□□□□ -0.42
SMG9-210ENST00000600097 NUTF2P61970 127 aaKnown RBP12.4□□□□□ -0.42
SMG9-210ENST00000600097 POM121L12Q8N7R1 296 aa12.4□□□□□ -0.42
SMG9-210ENST00000600097 CLEC5AQ9NY25 188 aa12.4□□□□□ -0.42
SMG9-210ENST00000600097 MRPL36Q9P0J6 103 aaKnown RBP12.4□□□□□ -0.42
SMG9-210ENST00000600097 AGRNO00468 2067 aa12.39□□□□□ -0.43
SMG9-210ENST00000600097 TEX13DA0A0J9YY54 714 aaPredicted RBP12.39□□□□□ -0.43
SMG9-210ENST00000600097 A0A1B0GVY2 172 aa12.39□□□□□ -0.43
SMG9-210ENST00000600097 NAP1L6A6NFF2 107 aa12.39□□□□□ -0.43
SMG9-210ENST00000600097 CENPXA8MT69 81 aa12.39□□□□□ -0.43
SMG9-210ENST00000600097 IGKV1-17P01599 117 aa12.39□□□□□ -0.43
SMG9-210ENST00000600097 MED14OSP0DP75 135 aa12.39□□□□□ -0.43
SMG9-210ENST00000600097 DHRS2Q13268 280 aa12.39□□□□□ -0.43
SMG9-210ENST00000600097 S100ZQ8WXG8 99 aa12.39□□□□□ -0.43
SMG9-210ENST00000600097 RRNAD1Q96FB5 475 aaKnown RBP12.39□□□□□ -0.43
SMG9-210ENST00000600097 RAB40CQ96S21 281 aa12.39□□□□□ -0.43
SMG9-210ENST00000600097 TP53RKQ96S44 253 aa12.39□□□□□ -0.43
SMG9-210ENST00000600097 RTBDNQ9BSG5 229 aaPredicted RBP12.39□□□□□ -0.43
SMG9-210ENST00000600097 NDUFAF3Q9BU61 184 aa12.39□□□□□ -0.43
SMG9-210ENST00000600097 PTTG2Q9NZH5 202 aa12.39□□□□□ -0.43
SMG9-210ENST00000600097 U3KQE9 123 aa12.39□□□□□ -0.43
SMG9-210ENST00000600097 RPS10-NUDT3A0A1W2PQS6 291 aa12.38□□□□□ -0.43
SMG9-210ENST00000600097 NPY1RP25929 384 aa12.38□□□□□ -0.43
SMG9-210ENST00000600097 BAK1Q16611 211 aa12.38□□□□□ -0.43
SMG9-210ENST00000600097 MLANAQ16655 118 aa12.38□□□□□ -0.43
SMG9-210ENST00000600097 C12orf74Q32Q52 190 aa12.38□□□□□ -0.43
SMG9-210ENST00000600097 BSXQ3C1V8 233 aa12.38□□□□□ -0.43
SMG9-210ENST00000600097 PSMG4Q5JS54 123 aa12.38□□□□□ -0.43
SMG9-210ENST00000600097 SLC25A21Q9BQT8 299 aaPredicted RBP12.38□□□□□ -0.43
SMG9-210ENST00000600097 CELA1Q9UNI1 258 aa12.38□□□□□ -0.43
SMG9-210ENST00000600097 KCNIP3Q9Y2W7 256 aa12.38□□□□□ -0.43
SMG9-210ENST00000600097 DNAH6Q9C0G6 4158 aa12.37□□□□□ -0.43
SMG9-210ENST00000600097 HNRNPCP07910 306 aaKnown RBP eCLIP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms