RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 GBGT1Q8N5D6 347 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 SORL1Q92673 2214 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 IGHV3-66A0A0C4DH42 116 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 ISLRO14498 428 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 IGHG3P01860 377 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 COL8A1P27658 744 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 HNRNPA3P51991 378 aaKnown RBP10.11□□□□□ -0.79
USHBP1-207ENST00000597928 FXYD7P58549 80 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 PNKDQ8N490 385 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 LOXL4Q96JB6 756 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 NOL4LQ96MY1 436 aaPredicted RBP10.11□□□□□ -0.79
USHBP1-207ENST00000597928 YPEL4Q96NS1 127 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 TMEM106BQ9NUM4 274 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 TMEM242Q9NWH2 141 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 COL4A2P08572 1712 aa10.11□□□□□ -0.79
USHBP1-207ENST00000597928 IGKV1OR2-108A0A075B7D4 117 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 IGHV3OR16-10A0A075B7F0 116 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 C17orf100A8MU93 164 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 J3QW42 95 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 GCGP01275 180 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 RPL27AP46776 148 aaKnown RBP10.1□□□□□ -0.79
USHBP1-207ENST00000597928 GOLT1AQ6ZVE7 132 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 CLEC5AQ9NY25 188 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 RPUSD1Q9UJJ7 312 aaKnown RBP10.1□□□□□ -0.79
USHBP1-207ENST00000597928 KMT2EQ8IZD2 1858 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 PCSK5Q92824 1860 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 A0A0G2JNJ9 132 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 GGTLC3B5MD39 225 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 BRS3P32247 399 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 TMEM183BQ1AE95 376 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 SPATA45Q537H7 98 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 MBNL2Q5VZF2 373 aaKnown RBP10.1□□□□□ -0.79
USHBP1-207ENST00000597928 Q9UFV3 132 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 ZNF292O60281 2723 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 IGFL4Q6B9Z1 124 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 EXOC3-AS1Q8N2X6 119 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 PRR7Q8TB68 274 aa10.1□□□□□ -0.79
USHBP1-207ENST00000597928 COL5A1P20908 1838 aaPredicted RBP10.1□□□□□ -0.79
USHBP1-207ENST00000597928 TMEM177Q53S58 311 aa10.09□□□□□ -0.79
USHBP1-207ENST00000597928 Q6ZVH6 145 aa10.09□□□□□ -0.79
USHBP1-207ENST00000597928 SSX8Q7RTT4 187 aa10.09□□□□□ -0.79
USHBP1-207ENST00000597928 TMEM144Q7Z5S9 345 aa10.09□□□□□ -0.79
USHBP1-207ENST00000597928 WFDC3Q8IUB2 231 aa10.09□□□□□ -0.79
USHBP1-207ENST00000597928 TCTEX1D1Q8N7M0 179 aa10.09□□□□□ -0.79
USHBP1-207ENST00000597928 OR4C13Q8NGP0 309 aa10.09□□□□□ -0.79
USHBP1-207ENST00000597928 DLL1O00548 723 aa10.09□□□□□ -0.79
USHBP1-207ENST00000597928 GGCTO75223 188 aaKnown RBP10.09□□□□□ -0.79
USHBP1-207ENST00000597928 RNF151Q2KHN1 245 aa10.09□□□□□ -0.79
USHBP1-207ENST00000597928 RNF2Q99496 336 aa10.09□□□□□ -0.79
USHBP1-207ENST00000597928 NGBQ9NPG2 151 aa10.09□□□□□ -0.79
USHBP1-207ENST00000597928 HIGD1CA8MV81 97 aa10.09□□□□□ -0.79
USHBP1-207ENST00000597928 ADIPOQQ15848 244 aa10.09□□□□□ -0.79
USHBP1-207ENST00000597928 MAJINQ3KP22 176 aa10.09□□□□□ -0.79
USHBP1-207ENST00000597928 C1orf162Q8NEQ5 155 aaPredicted RBP10.09□□□□□ -0.79
USHBP1-207ENST00000597928 RCHY1Q96PM5 261 aa10.09□□□□□ -0.79
USHBP1-207ENST00000597928 NRN1Q9NPD7 142 aa10.09□□□□□ -0.79
USHBP1-207ENST00000597928 C2CD3Q4AC94 2353 aa10.08□□□□□ -0.8
USHBP1-207ENST00000597928 ASH1LQ9NR48 2969 aaKnown RBP10.08□□□□□ -0.8
USHBP1-207ENST00000597928 MYO18BQ8IUG5 2567 aa10.08□□□□□ -0.8
USHBP1-207ENST00000597928 P01737 135 aa10.08□□□□□ -0.8
USHBP1-207ENST00000597928 POLR3KQ9Y2Y1 108 aaPredicted RBP10.08□□□□□ -0.8
USHBP1-207ENST00000597928 ADAMTS20P59510 1910 aa10.08□□□□□ -0.8
USHBP1-207ENST00000597928 CCDC168Q8NDH2 2452 aa10.08□□□□□ -0.8
USHBP1-207ENST00000597928 FCGR2BP31994 310 aaPredicted RBP10.08□□□□□ -0.8
USHBP1-207ENST00000597928 PRCDQ00LT1 54 aa10.08□□□□□ -0.8
USHBP1-207ENST00000597928 CD69Q07108 199 aa10.08□□□□□ -0.8
USHBP1-207ENST00000597928 WASHC3Q9Y3C0 194 aa10.08□□□□□ -0.8
USHBP1-207ENST00000597928 CD3EP07766 207 aa10.08□□□□□ -0.8
USHBP1-207ENST00000597928 NBEAP1P0C6P0 100 aa10.08□□□□□ -0.8
USHBP1-207ENST00000597928 WT1-ASQ06250 92 aa10.08□□□□□ -0.8
USHBP1-207ENST00000597928 KLRD1Q13241 179 aa10.08□□□□□ -0.8
USHBP1-207ENST00000597928 Q6ZWC4 215 aa10.08□□□□□ -0.8
USHBP1-207ENST00000597928 OR8B2Q96RD0 313 aa10.08□□□□□ -0.8
USHBP1-207ENST00000597928 NDUFAF3Q9BU61 184 aa10.08□□□□□ -0.8
USHBP1-207ENST00000597928 MRPL36Q9P0J6 103 aaKnown RBP10.08□□□□□ -0.8
USHBP1-207ENST00000597928 WNK1Q9H4A3 2382 aa10.07□□□□□ -0.8
USHBP1-207ENST00000597928 A8MWP6 167 aa10.07□□□□□ -0.8
USHBP1-207ENST00000597928 TCF21O43680 179 aa10.07□□□□□ -0.8
USHBP1-207ENST00000597928 HYPMO75409 117 aa10.07□□□□□ -0.8
USHBP1-207ENST00000597928 HTR1DP28221 377 aa10.07□□□□□ -0.8
USHBP1-207ENST00000597928 GRNP28799 593 aaKnown RBP10.07□□□□□ -0.8
USHBP1-207ENST00000597928 LCN2P80188 198 aa10.07□□□□□ -0.8
USHBP1-207ENST00000597928 RASL11BQ9BPW5 248 aa10.07□□□□□ -0.8
USHBP1-207ENST00000597928 IGHV1-69-2A0A0G2JMI3 117 aa10.07□□□□□ -0.8
USHBP1-207ENST00000597928 CCL21O00585 134 aa10.07□□□□□ -0.8
USHBP1-207ENST00000597928 RNASE2P10153 161 aaKnown RBP10.07□□□□□ -0.8
USHBP1-207ENST00000597928 RPL11P62913 178 aaKnown RBP10.07□□□□□ -0.8
USHBP1-207ENST00000597928 ZNF124Q15973 351 aa10.07□□□□□ -0.8
USHBP1-207ENST00000597928 ZNF207O43670 478 aaKnown RBP10.06□□□□□ -0.8
USHBP1-207ENST00000597928 SNHG12Q9BXW3 62 aa10.06□□□□□ -0.8
USHBP1-207ENST00000597928 FNDC4Q9H6D8 234 aaPredicted RBP10.06□□□□□ -0.8
USHBP1-207ENST00000597928 SONP18583 2426 aaKnown RBP10.06□□□□□ -0.8
USHBP1-207ENST00000597928 RBPJQ06330 500 aa10.06□□□□□ -0.8
USHBP1-207ENST00000597928 ZNF788Q6ZQV5 615 aa10.06□□□□□ -0.8
USHBP1-207ENST00000597928 CIARTQ8N365 385 aaPredicted RBP10.06□□□□□ -0.8
USHBP1-207ENST00000597928 RNF24Q9Y225 148 aa10.06□□□□□ -0.8
USHBP1-207ENST00000597928 FOXA2Q9Y261 457 aaPredicted RBP10.06□□□□□ -0.8
USHBP1-207ENST00000597928 PPIAL4CA0A0B4J2A2 164 aa10.06□□□□□ -0.8
USHBP1-207ENST00000597928 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.06□□□□□ -0.8
USHBP1-207ENST00000597928 CBY3A6NI87 242 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms