RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 F8W036 122 aa9.99□□□□□ -0.81
SCAF1-202ENST00000595242 AGPAT2O15120 278 aa9.99□□□□□ -0.81
SCAF1-202ENST00000595242 REG1BP48304 166 aa9.99□□□□□ -0.81
SCAF1-202ENST00000595242 RPL8P62917 257 aaKnown RBP9.99□□□□□ -0.81
SCAF1-202ENST00000595242 ZNF726P1Q15940 193 aa9.99□□□□□ -0.81
SCAF1-202ENST00000595242 VMA21Q3ZAQ7 101 aa9.99□□□□□ -0.81
SCAF1-202ENST00000595242 ZNF506Q5JVG8 444 aa9.99□□□□□ -0.81
SCAF1-202ENST00000595242 C18orf65Q6ZTR6 163 aa9.99□□□□□ -0.81
SCAF1-202ENST00000595242 TEX45Q8NA69 505 aa9.99□□□□□ -0.81
SCAF1-202ENST00000595242 OR1L8Q8NGR8 309 aa9.99□□□□□ -0.81
SCAF1-202ENST00000595242 RNF5Q99942 180 aa9.99□□□□□ -0.81
SCAF1-202ENST00000595242 VSIRQ9H7M9 311 aa9.99□□□□□ -0.81
SCAF1-202ENST00000595242 NDUFA4L2Q9NRX3 87 aa9.99□□□□□ -0.81
SCAF1-202ENST00000595242 PLECQ15149 4684 aaKnown RBP9.98□□□□□ -0.81
SCAF1-202ENST00000595242 IGHV1-3A0A0C4DH29 117 aa9.98□□□□□ -0.81
SCAF1-202ENST00000595242 A0A1W2PN81 502 aa9.98□□□□□ -0.81
SCAF1-202ENST00000595242 NDUFS6O75380 124 aaKnown RBP9.98□□□□□ -0.81
SCAF1-202ENST00000595242 CA2P00918 260 aa9.98□□□□□ -0.81
SCAF1-202ENST00000595242 CRYGBP07316 175 aa9.98□□□□□ -0.81
SCAF1-202ENST00000595242 CHRNA7P36544 502 aa9.98□□□□□ -0.81
SCAF1-202ENST00000595242 RPS16P62249 146 aaKnown RBP9.98□□□□□ -0.81
SCAF1-202ENST00000595242 MRGPRG-AS1Q2M3A8 158 aa9.98□□□□□ -0.81
SCAF1-202ENST00000595242 ACSM6Q6P461 480 aa9.98□□□□□ -0.81
SCAF1-202ENST00000595242 NKX6-2Q9C056 277 aaPredicted RBP9.98□□□□□ -0.81
SCAF1-202ENST00000595242 ZMAT4Q9H898 229 aa9.98□□□□□ -0.81
SCAF1-202ENST00000595242 KCNIP2Q9NS61 270 aa9.98□□□□□ -0.81
SCAF1-202ENST00000595242 HILPDAQ9Y5L2 63 aa9.98□□□□□ -0.81
SCAF1-202ENST00000595242 CTXND1A0A1B0GTU2 59 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 A0A1W2PPI3 338 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 PSMB11A5LHX3 300 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 RBFOX3A6NFN3 312 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 CGB1A6NKQ9 187 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 SNAPINO95295 136 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 IGKV1D-33P01593 117 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 IGKV1-33P01594 117 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 RNASE2P10153 161 aaKnown RBP9.97□□□□□ -0.81
SCAF1-202ENST00000595242 MYOD1P15172 320 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 OPRK1P41145 380 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 CCL20P78556 96 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 DEFA5Q01523 94 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 GUCA2BQ16661 112 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 C9orf66Q5T8R8 295 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 ATRAIDQ6UW56 229 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 C16orf82Q7Z2V1 217 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 KLHL30-AS1Q8NEE0 82 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 OR10G4Q8NGN3 311 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 SFT2D1Q8WV19 159 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 DUX3Q96PT4 197 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 COMMD5Q9GZQ3 224 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 NPVFQ9HCQ7 196 aa9.97□□□□□ -0.81
SCAF1-202ENST00000595242 ZNF256Q9Y2P7 627 aaPredicted RBP9.97□□□□□ -0.81
SCAF1-202ENST00000595242 ALMS1Q8TCU4 4167 aa9.96□□□□□ -0.81
SCAF1-202ENST00000595242 LOC102723971A0A1B0GUV8 181 aa9.96□□□□□ -0.82
SCAF1-202ENST00000595242 SH2D7A6NKC9 451 aaPredicted RBP9.96□□□□□ -0.82
SCAF1-202ENST00000595242 SEC14L6B5MCN3 397 aa9.96□□□□□ -0.82
SCAF1-202ENST00000595242 HSPB1P04792 205 aaKnown RBP9.96□□□□□ -0.82
SCAF1-202ENST00000595242 IFNA4P05014 189 aa9.96□□□□□ -0.82
SCAF1-202ENST00000595242 MAS1LP35410 378 aa9.96□□□□□ -0.82
SCAF1-202ENST00000595242 KHDC3LQ587J8 217 aa9.96□□□□□ -0.82
SCAF1-202ENST00000595242 TPTE2P1Q5T6R2 138 aa9.96□□□□□ -0.82
SCAF1-202ENST00000595242 PVRIGQ6DKI7 326 aa9.96□□□□□ -0.82
SCAF1-202ENST00000595242 SSX7Q7RTT5 188 aa9.96□□□□□ -0.82
SCAF1-202ENST00000595242 ZNF329Q86UD4 541 aa9.96□□□□□ -0.82
SCAF1-202ENST00000595242 RPP25LQ8N5L8 163 aaKnown RBP9.96□□□□□ -0.82
SCAF1-202ENST00000595242 ZNF709Q8N972 641 aa9.96□□□□□ -0.82
SCAF1-202ENST00000595242 EIF5A2Q9GZV4 153 aaKnown RBP9.96□□□□□ -0.82
SCAF1-202ENST00000595242 SLC35B3Q9H1N7 401 aa9.96□□□□□ -0.82
SCAF1-202ENST00000595242 ZNF430Q9H8G1 570 aaPredicted RBP9.96□□□□□ -0.82
SCAF1-202ENST00000595242 MAP1LC3B2A6NCE7 125 aa9.95□□□□□ -0.82
SCAF1-202ENST00000595242 OOSP1A8MZH6 123 aa9.95□□□□□ -0.82
SCAF1-202ENST00000595242 DNASE2O00115 360 aaPredicted RBP9.95□□□□□ -0.82
SCAF1-202ENST00000595242 SNRNP70P08621 437 aaKnown RBP9.95□□□□□ -0.82
SCAF1-202ENST00000595242 SRP19P09132 144 aaKnown RBP9.95□□□□□ -0.82
SCAF1-202ENST00000595242 TAGLN2P37802 199 aaKnown RBP9.95□□□□□ -0.82
SCAF1-202ENST00000595242 CEACAM3P40198 252 aa9.95□□□□□ -0.82
SCAF1-202ENST00000595242 PPT1P50897 306 aa9.95□□□□□ -0.82
SCAF1-202ENST00000595242 ELLP55199 621 aaPredicted RBP9.95□□□□□ -0.82
SCAF1-202ENST00000595242 ICAM4Q14773 271 aa9.95□□□□□ -0.82
SCAF1-202ENST00000595242 ACOT6Q3I5F7 207 aaPredicted RBP9.95□□□□□ -0.82
SCAF1-202ENST00000595242 FFAR4Q5NUL3 377 aa9.95□□□□□ -0.82
SCAF1-202ENST00000595242 MMD2Q8IY49 270 aa9.95□□□□□ -0.82
SCAF1-202ENST00000595242 ZNF114Q8NC26 417 aa9.95□□□□□ -0.82
SCAF1-202ENST00000595242 SUN5Q8TC36 379 aa9.95□□□□□ -0.82
SCAF1-202ENST00000595242 RPEQ96AT9 228 aa9.95□□□□□ -0.82
SCAF1-202ENST00000595242 MGST2Q99735 147 aa9.95□□□□□ -0.82
SCAF1-202ENST00000595242 GGTLC1Q9BX51 225 aa9.95□□□□□ -0.82
SCAF1-202ENST00000595242 MAP1LC3BQ9GZQ8 125 aa9.95□□□□□ -0.82
SCAF1-202ENST00000595242 EDA2RQ9HAV5 297 aa9.95□□□□□ -0.82
SCAF1-202ENST00000595242 DPM3Q9P2X0 92 aa9.95□□□□□ -0.82
SCAF1-202ENST00000595242 CCL24O00175 119 aa9.94□□□□□ -0.82
SCAF1-202ENST00000595242 SLC25A17O43808 307 aa9.94□□□□□ -0.82
SCAF1-202ENST00000595242 AMY1AP04745 511 aa9.94□□□□□ -0.82
SCAF1-202ENST00000595242 BCL2P10415 239 aa9.94□□□□□ -0.82
SCAF1-202ENST00000595242 CD24P25063 80 aa9.94□□□□□ -0.82
SCAF1-202ENST00000595242 HTR1DP28221 377 aa9.94□□□□□ -0.82
SCAF1-202ENST00000595242 PSG5Q15238 335 aa9.94□□□□□ -0.82
SCAF1-202ENST00000595242 PRSS8Q16651 343 aa9.94□□□□□ -0.82
SCAF1-202ENST00000595242 C9orf152Q5JTZ5 239 aa9.94□□□□□ -0.82
SCAF1-202ENST00000595242 TEPPQ6URK8 271 aa9.94□□□□□ -0.82
SCAF1-202ENST00000595242 OR10G9Q8NGN4 311 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms