RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 NAA50Q9GZZ1 169 aaKnown RBP13.76□□□□□ -0.21
CCDC43-205ENST00000592333 HEYLQ9NQ87 328 aaPredicted RBP13.76□□□□□ -0.21
CCDC43-205ENST00000592333 MRPL36Q9P0J6 103 aaKnown RBP13.76□□□□□ -0.21
CCDC43-205ENST00000592333 TMEM56-RWDD3S4R434 201 aa13.76□□□□□ -0.21
CCDC43-205ENST00000592333 IGHV3-66A0A0C4DH42 116 aa13.75□□□□□ -0.21
CCDC43-205ENST00000592333 IGLC1P0CG04 106 aa13.75□□□□□ -0.21
CCDC43-205ENST00000592333 NANOS2P60321 138 aaKnown RBP13.75□□□□□ -0.21
CCDC43-205ENST00000592333 MLANAQ16655 118 aa13.75□□□□□ -0.21
CCDC43-205ENST00000592333 FAM24BQ8N5W8 94 aa13.75□□□□□ -0.21
CCDC43-205ENST00000592333 STXBP6Q8NFX7 210 aa13.75□□□□□ -0.21
CCDC43-205ENST00000592333 PRRT1Q99946 306 aa13.75□□□□□ -0.21
CCDC43-205ENST00000592333 GPR132Q9UNW8 380 aa13.75□□□□□ -0.21
CCDC43-205ENST00000592333 CRYM-AS1A6NIL9 109 aa13.74□□□□□ -0.21
CCDC43-205ENST00000592333 RGS5O15539 181 aa13.74□□□□□ -0.21
CCDC43-205ENST00000592333 AKAIN1P0CW23 69 aa13.74□□□□□ -0.21
CCDC43-205ENST00000592333 SMIM18P0DKX4 95 aa13.74□□□□□ -0.21
CCDC43-205ENST00000592333 PRSS54Q6PEW0 395 aa13.74□□□□□ -0.21
CCDC43-205ENST00000592333 SELENOHQ8IZQ5 122 aaKnown RBP13.74□□□□□ -0.21
CCDC43-205ENST00000592333 Q8NAQ8 132 aa13.74□□□□□ -0.21
CCDC43-205ENST00000592333 SLC24A4Q8NFF2 622 aa13.74□□□□□ -0.21
CCDC43-205ENST00000592333 SCGB3A2Q96PL1 93 aa13.74□□□□□ -0.21
CCDC43-205ENST00000592333 MIXL1Q9H2W2 232 aa13.74□□□□□ -0.21
CCDC43-205ENST00000592333 PIGBOS1A0A0B4J2F0 54 aa13.73□□□□□ -0.21
CCDC43-205ENST00000592333 ZNF705EA8MWA4 302 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-205ENST00000592333 HNRNPCP07910 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
CCDC43-205ENST00000592333 ATP5IP56385 69 aaPredicted RBP13.73□□□□□ -0.21
CCDC43-205ENST00000592333 TIGITQ495A1 244 aa13.73□□□□□ -0.21
CCDC43-205ENST00000592333 C16orf54Q6UWD8 224 aa13.73□□□□□ -0.21
CCDC43-205ENST00000592333 LHFPL5Q8TAF8 219 aa13.73□□□□□ -0.21
CCDC43-205ENST00000592333 GPR146Q96CH1 333 aa13.73□□□□□ -0.21
CCDC43-205ENST00000592333 FBXL17Q9UF56 701 aa13.73□□□□□ -0.21
CCDC43-205ENST00000592333 KCNIP3Q9Y2W7 256 aa13.73□□□□□ -0.21
CCDC43-205ENST00000592333 KMT2AQ03164 3969 aa13.73□□□□□ -0.21
CCDC43-205ENST00000592333 GSTZ1O43708 216 aaPredicted RBP13.72□□□□□ -0.21
CCDC43-205ENST00000592333 GIG44P09565 113 aaPredicted RBP13.72□□□□□ -0.21
CCDC43-205ENST00000592333 OR10J1P30954 320 aa13.72□□□□□ -0.21
CCDC43-205ENST00000592333 NMSQ5H8A3 153 aa13.72□□□□□ -0.21
CCDC43-205ENST00000592333 TMEM268Q5VZI3 342 aa13.72□□□□□ -0.21
CCDC43-205ENST00000592333 RPP25LQ8N5L8 163 aaKnown RBP13.72□□□□□ -0.21
CCDC43-205ENST00000592333 BCL7BQ9BQE9 202 aa13.72□□□□□ -0.21
CCDC43-205ENST00000592333 MRPS26Q9BYN8 205 aaKnown RBP13.72□□□□□ -0.21
CCDC43-205ENST00000592333 CACNG5Q9UF02 275 aa13.72□□□□□ -0.21
CCDC43-205ENST00000592333 U3KQ87 197 aa13.72□□□□□ -0.21
CCDC43-205ENST00000592333 CEBPZOSA8MTT3 80 aa13.71□□□□□ -0.21
CCDC43-205ENST00000592333 CTDSP2O14595 271 aa13.71□□□□□ -0.21
CCDC43-205ENST00000592333 SULT1A3P0DMM9 295 aa13.71□□□□□ -0.21
CCDC43-205ENST00000592333 SULT1A4P0DMN0 295 aa13.71□□□□□ -0.21
CCDC43-205ENST00000592333 RND2P52198 227 aa13.71□□□□□ -0.21
CCDC43-205ENST00000592333 NUTF2P61970 127 aaKnown RBP13.71□□□□□ -0.21
CCDC43-205ENST00000592333 SNRPD3P62318 126 aaKnown RBP13.71□□□□□ -0.21
CCDC43-205ENST00000592333 GPR141Q7Z602 305 aa13.71□□□□□ -0.21
CCDC43-205ENST00000592333 GLMPQ8WWB7 406 aa13.71□□□□□ -0.21
CCDC43-205ENST00000592333 C1QTNF4Q9BXJ3 329 aa13.71□□□□□ -0.21
CCDC43-205ENST00000592333 PLA2G2EQ9NZK7 142 aa13.71□□□□□ -0.21
CCDC43-205ENST00000592333 SCP2D1Q9UJQ7 156 aa13.71□□□□□ -0.21
CCDC43-205ENST00000592333 ZNF688P0C7X2 276 aa13.7□□□□□ -0.22
CCDC43-205ENST00000592333 NPY1RP25929 384 aa13.7□□□□□ -0.22
CCDC43-205ENST00000592333 NUP62P37198 522 aaPredicted RBP13.7□□□□□ -0.22
CCDC43-205ENST00000592333 ALDH3B2P48448 385 aa13.7□□□□□ -0.22
CCDC43-205ENST00000592333 DHRS2Q13268 280 aa13.7□□□□□ -0.22
CCDC43-205ENST00000592333 CENPSQ8N2Z9 138 aa13.7□□□□□ -0.22
CCDC43-205ENST00000592333 OR4C16Q8NGL9 310 aa13.7□□□□□ -0.22
CCDC43-205ENST00000592333 DIRAS2Q96HU8 199 aa13.7□□□□□ -0.22
CCDC43-205ENST00000592333 PFDN2Q9UHV9 154 aa13.7□□□□□ -0.22
CCDC43-205ENST00000592333 ANKRD20A5PA0PJZ0 165 aa13.69□□□□□ -0.22
CCDC43-205ENST00000592333 BUB3O43684 328 aa13.69□□□□□ -0.22
CCDC43-205ENST00000592333 TOMM40O96008 361 aa13.69□□□□□ -0.22
CCDC43-205ENST00000592333 RD3LP0DJH9 198 aa13.69□□□□□ -0.22
CCDC43-205ENST00000592333 IL18Q14116 193 aa13.69□□□□□ -0.22
CCDC43-205ENST00000592333 FAAP20Q6NZ36 180 aa13.69□□□□□ -0.22
CCDC43-205ENST00000592333 CSNK1G2-AS1Q8NCQ2 148 aa13.69□□□□□ -0.22
CCDC43-205ENST00000592333 RAB2BQ8WUD1 216 aa13.69□□□□□ -0.22
CCDC43-205ENST00000592333 RAB40CQ96S21 281 aa13.69□□□□□ -0.22
CCDC43-205ENST00000592333 NRN1Q9NPD7 142 aa13.69□□□□□ -0.22
CCDC43-205ENST00000592333 CCDC59Q9P031 241 aaKnown RBP13.69□□□□□ -0.22
CCDC43-205ENST00000592333 RSL24D1Q9UHA3 163 aaKnown RBP13.69□□□□□ -0.22
CCDC43-205ENST00000592333 A0A0B4J2A0 478 aa13.68□□□□□ -0.22
CCDC43-205ENST00000592333 IGHV4-28A0A0C4DH34 117 aa13.68□□□□□ -0.22
CCDC43-205ENST00000592333 DEFB4AO15263 64 aa13.68□□□□□ -0.22
CCDC43-205ENST00000592333 IL4P05112 153 aa13.68□□□□□ -0.22
CCDC43-205ENST00000592333 CCR6P51684 374 aa13.68□□□□□ -0.22
CCDC43-205ENST00000592333 SRPXP78539 464 aa13.68□□□□□ -0.22
CCDC43-205ENST00000592333 ACTL10Q5JWF8 245 aa13.68□□□□□ -0.22
CCDC43-205ENST00000592333 CLVS1Q8IUQ0 354 aaPredicted RBP13.68□□□□□ -0.22
CCDC43-205ENST00000592333 OR51S1Q8NGJ8 323 aa13.68□□□□□ -0.22
CCDC43-205ENST00000592333 TMEM170AQ8WVE7 144 aa13.68□□□□□ -0.22
CCDC43-205ENST00000592333 NPIPB3Q92617 1050 aa13.68□□□□□ -0.22
CCDC43-205ENST00000592333 HSPB7Q9UBY9 170 aa13.68□□□□□ -0.22
CCDC43-205ENST00000592333 SHPKQ9UHJ6 478 aa13.68□□□□□ -0.22
CCDC43-205ENST00000592333 X6R8D5 127 aa13.68□□□□□ -0.22
CCDC43-205ENST00000592333 FRAS1Q86XX4 4008 aa13.68□□□□□ -0.22
CCDC43-205ENST00000592333 KNCNA6PVL3 124 aa13.67□□□□□ -0.22
CCDC43-205ENST00000592333 DEDDO75618 318 aa13.67□□□□□ -0.22
CCDC43-205ENST00000592333 RBMY1A1P0DJD3 496 aaKnown RBP13.67□□□□□ -0.22
CCDC43-205ENST00000592333 RBMY1CP0DJD4 496 aa13.67□□□□□ -0.22
CCDC43-205ENST00000592333 SPCS2Q15005 226 aa13.67□□□□□ -0.22
CCDC43-205ENST00000592333 RBMY1FQ15415 496 aaKnown RBP13.67□□□□□ -0.22
CCDC43-205ENST00000592333 USF2Q15853 346 aaPredicted RBP13.67□□□□□ -0.22
CCDC43-205ENST00000592333 TBC1D24Q9ULP9 559 aa13.67□□□□□ -0.22
CCDC43-205ENST00000592333 APLNQ9ULZ1 77 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms