RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 CTSGP08311 255 aa10.47□□□□□ -0.73
VMP1-210ENST00000589823 OR10J1P30954 320 aa10.47□□□□□ -0.73
VMP1-210ENST00000589823 SLURP1P55000 103 aa10.47□□□□□ -0.73
VMP1-210ENST00000589823 NHLH2Q02577 135 aa10.47□□□□□ -0.73
VMP1-210ENST00000589823 ARL16Q0P5N6 197 aa10.47□□□□□ -0.73
VMP1-210ENST00000589823 ATP6V1FQ16864 119 aa10.47□□□□□ -0.73
VMP1-210ENST00000589823 ZNF546Q86UE3 836 aa10.47□□□□□ -0.73
VMP1-210ENST00000589823 HAPLN4Q86UW8 402 aa10.47□□□□□ -0.73
VMP1-210ENST00000589823 OR1S2Q8NGQ3 325 aa10.47□□□□□ -0.73
VMP1-210ENST00000589823 CHRDL1Q9BU40 450 aa10.47□□□□□ -0.73
VMP1-210ENST00000589823 ZFP92A6NM28 416 aa10.46□□□□□ -0.73
VMP1-210ENST00000589823 SMLR1H3BR10 107 aa10.46□□□□□ -0.73
VMP1-210ENST00000589823 IGLC1P0CG04 106 aa10.46□□□□□ -0.73
VMP1-210ENST00000589823 FAM106AQ4KMX7 169 aa10.46□□□□□ -0.73
VMP1-210ENST00000589823 TMEM144Q7Z5S9 345 aa10.46□□□□□ -0.73
VMP1-210ENST00000589823 INO80EQ8NBZ0 244 aaPredicted RBP10.46□□□□□ -0.73
VMP1-210ENST00000589823 ST6GAL2Q96JF0 529 aa10.46□□□□□ -0.73
VMP1-210ENST00000589823 TMEM147Q9BVK8 224 aa10.46□□□□□ -0.73
VMP1-210ENST00000589823 NPVFQ9HCQ7 196 aa10.46□□□□□ -0.73
VMP1-210ENST00000589823 UQCC1Q9NVA1 299 aa10.46□□□□□ -0.73
VMP1-210ENST00000589823 HSPB11Q9Y547 144 aa10.46□□□□□ -0.73
VMP1-210ENST00000589823 IGHV3-35A0A0C4DH35 117 aa10.45□□□□□ -0.74
VMP1-210ENST00000589823 FABP1P07148 127 aa10.45□□□□□ -0.74
VMP1-210ENST00000589823 ADMP35318 185 aa10.45□□□□□ -0.74
VMP1-210ENST00000589823 SYNJ2BPP57105 145 aa10.45□□□□□ -0.74
VMP1-210ENST00000589823 KLF5Q13887 457 aaPredicted RBP10.45□□□□□ -0.74
VMP1-210ENST00000589823 TIGITQ495A1 244 aa10.45□□□□□ -0.74
VMP1-210ENST00000589823 ZNF600Q6ZNG1 722 aa10.45□□□□□ -0.74
VMP1-210ENST00000589823 GPHB5Q86YW7 130 aa10.45□□□□□ -0.74
VMP1-210ENST00000589823 C1QL4Q86Z23 238 aa10.45□□□□□ -0.74
VMP1-210ENST00000589823 TCTE3Q8IZS6 198 aa10.45□□□□□ -0.74
VMP1-210ENST00000589823 LINC00482Q8N8I6 264 aa10.45□□□□□ -0.74
VMP1-210ENST00000589823 THAP8Q8NA92 274 aa10.45□□□□□ -0.74
VMP1-210ENST00000589823 OR5C1Q8NGR4 320 aa10.45□□□□□ -0.74
VMP1-210ENST00000589823 DLX4Q92988 240 aaPredicted RBP10.45□□□□□ -0.74
VMP1-210ENST00000589823 AQP10Q96PS8 301 aa10.45□□□□□ -0.74
VMP1-210ENST00000589823 ZNF320A2RRD8 509 aa10.44□□□□□ -0.74
VMP1-210ENST00000589823 G3V3Q6 166 aa10.44□□□□□ -0.74
VMP1-210ENST00000589823 NDUFA4O00483 81 aa10.44□□□□□ -0.74
VMP1-210ENST00000589823 OVOL1O14753 267 aa10.44□□□□□ -0.74
VMP1-210ENST00000589823 YIF1AO95070 293 aa10.44□□□□□ -0.74
VMP1-210ENST00000589823 IGKV1-17P01599 117 aa10.44□□□□□ -0.74
VMP1-210ENST00000589823 CD33P20138 364 aa10.44□□□□□ -0.74
VMP1-210ENST00000589823 YPEL3P61236 119 aaPredicted RBP10.44□□□□□ -0.74
VMP1-210ENST00000589823 CLINT1Q14677 625 aa10.44□□□□□ -0.74
VMP1-210ENST00000589823 TEPPQ6URK8 271 aa10.44□□□□□ -0.74
VMP1-210ENST00000589823 Q8WTZ3 238 aa10.44□□□□□ -0.74
VMP1-210ENST00000589823 TRGV9Q99603 122 aa10.44□□□□□ -0.74
VMP1-210ENST00000589823 PEMTQ9UBM1 199 aa10.44□□□□□ -0.74
VMP1-210ENST00000589823 TNFSF18Q9UNG2 199 aa10.44□□□□□ -0.74
VMP1-210ENST00000589823 IGKV1D-37A0A075B6S9 117 aa10.43□□□□□ -0.74
VMP1-210ENST00000589823 UBE2L5PA0A1B0GUS4 154 aa10.43□□□□□ -0.74
VMP1-210ENST00000589823 DFFBO76075 338 aa10.43□□□□□ -0.74
VMP1-210ENST00000589823 RD3LP0DJH9 198 aa10.43□□□□□ -0.74
VMP1-210ENST00000589823 RAB31Q13636 194 aa10.43□□□□□ -0.74
VMP1-210ENST00000589823 VWC2Q2TAL6 325 aa10.43□□□□□ -0.74
VMP1-210ENST00000589823 TREML4Q6UXN2 200 aa10.43□□□□□ -0.74
VMP1-210ENST00000589823 REC114Q7Z4M0 266 aa10.43□□□□□ -0.74
VMP1-210ENST00000589823 ATP5SQ99766 215 aa10.43□□□□□ -0.74
VMP1-210ENST00000589823 UFC1Q9Y3C8 167 aa10.43□□□□□ -0.74
VMP1-210ENST00000589823 PUS1Q9Y606 427 aaKnown RBP eCLIP10.43□□□□□ -0.74
VMP1-210ENST00000589823 LGALS9O00182 355 aa10.42□□□□□ -0.74
VMP1-210ENST00000589823 ARPC5O15511 151 aa10.42□□□□□ -0.74
VMP1-210ENST00000589823 TOMM40O96008 361 aa10.42□□□□□ -0.74
VMP1-210ENST00000589823 AP2S1P53680 142 aaPredicted RBP10.42□□□□□ -0.74
VMP1-210ENST00000589823 OR9G4Q8NGQ1 327 aa10.42□□□□□ -0.74
VMP1-210ENST00000589823 TMEM190Q8WZ59 177 aa10.42□□□□□ -0.74
VMP1-210ENST00000589823 C20orf24Q9BUV8 137 aa10.42□□□□□ -0.74
VMP1-210ENST00000589823 ELOVL1Q9BW60 279 aa10.42□□□□□ -0.74
VMP1-210ENST00000589823 SMIM3Q9BZL3 60 aa10.42□□□□□ -0.74
VMP1-210ENST00000589823 MFFQ9GZY8 342 aa10.42□□□□□ -0.74
VMP1-210ENST00000589823 WDR83OSQ9Y284 106 aa10.42□□□□□ -0.74
VMP1-210ENST00000589823 TRRAPQ9Y4A5 3859 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 IGKV1OR2-108A0A075B7D4 117 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 RNF222A6NCQ9 220 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 HMSDA8MTL9 139 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 IFNA5P01569 189 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 SELENOTP62341 195 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 ZNF90Q03938 601 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 PRR31Q5SQ13 230 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 BTNL8Q6UX41 500 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 TOMM20LQ6UXN7 152 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 UNQ9165/PRO28630Q6UXU0 137 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 CYP2G1PQ6ZSU1 146 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 WFDC9Q8NEX5 89 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 BPIFCQ8NFQ6 507 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 OR51G1Q8NGK1 321 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 GINS3Q9BRX5 216 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 MCRIP2Q9BUT9 160 aaKnown RBP10.41□□□□□ -0.74
VMP1-210ENST00000589823 FBXL17Q9UF56 701 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 DNHD1Q96M86 4753 aa10.41□□□□□ -0.74
VMP1-210ENST00000589823 MPDU1O75352 247 aa10.4□□□□□ -0.74
VMP1-210ENST00000589823 CFDP00746 253 aaPredicted RBP10.4□□□□□ -0.74
VMP1-210ENST00000589823 C1QBP02746 253 aa10.4□□□□□ -0.74
VMP1-210ENST00000589823 IL4P05112 153 aa10.4□□□□□ -0.74
VMP1-210ENST00000589823 PSG1P11464 419 aa10.4□□□□□ -0.74
VMP1-210ENST00000589823 FGF7P21781 194 aa10.4□□□□□ -0.74
VMP1-210ENST00000589823 ELLP55199 621 aaPredicted RBP10.4□□□□□ -0.74
VMP1-210ENST00000589823 OR2F1Q13607 317 aa10.4□□□□□ -0.74
VMP1-210ENST00000589823 OR11H4Q8NGC9 324 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms