RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 I3L521 148 aa15.59■□□□□ 0.09
ATG4D-208ENST00000588667 REG1AP05451 166 aa15.59■□□□□ 0.09
ATG4D-208ENST00000588667 CTRB1P17538 263 aa15.59■□□□□ 0.09
ATG4D-208ENST00000588667 FGF7P21781 194 aa15.59■□□□□ 0.09
ATG4D-208ENST00000588667 MYCNOSP40205 109 aa15.59■□□□□ 0.09
ATG4D-208ENST00000588667 RAB5CP51148 216 aa15.59■□□□□ 0.09
ATG4D-208ENST00000588667 DEFB136Q30KP8 78 aa15.59■□□□□ 0.09
ATG4D-208ENST00000588667 CTRB2Q6GPI1 263 aa15.59■□□□□ 0.09
ATG4D-208ENST00000588667 OR1P1Q8NH06 330 aa15.59■□□□□ 0.09
ATG4D-208ENST00000588667 CACNG8Q8WXS5 425 aa15.59■□□□□ 0.09
ATG4D-208ENST00000588667 RAX2Q96IS3 184 aa15.59■□□□□ 0.09
ATG4D-208ENST00000588667 WDR83OSQ9Y284 106 aa15.59■□□□□ 0.09
ATG4D-208ENST00000588667 TRBV9A0A0B4J1U6 114 aa15.58■□□□□ 0.09
ATG4D-208ENST00000588667 UMAD1C9J7I0 102 aa15.58■□□□□ 0.09
ATG4D-208ENST00000588667 CCL24O00175 119 aa15.58■□□□□ 0.09
ATG4D-208ENST00000588667 CORTO00230 105 aa15.58■□□□□ 0.09
ATG4D-208ENST00000588667 MPDU1O75352 247 aa15.58■□□□□ 0.09
ATG4D-208ENST00000588667 LGALS1P09382 135 aaKnown RBP15.58■□□□□ 0.09
ATG4D-208ENST00000588667 GPX4P36969 197 aaPredicted RBP15.58■□□□□ 0.09
ATG4D-208ENST00000588667 USMG5Q96IX5 58 aa15.58■□□□□ 0.09
ATG4D-208ENST00000588667 OR5B12Q96R08 314 aa15.58■□□□□ 0.09
ATG4D-208ENST00000588667 NPVFQ9HCQ7 196 aa15.58■□□□□ 0.09
ATG4D-208ENST00000588667 TIMM9Q9Y5J7 89 aa15.58■□□□□ 0.09
ATG4D-208ENST00000588667 FAM223BA6NKX1 122 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 PRH1P02810 166 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 CD69Q07108 199 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 PVRIGQ6DKI7 326 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 BTNL8Q6UX41 500 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 FAM223AQ8IWN6 122 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 ZNF709Q8N972 641 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 SAT2Q96F10 170 aaPredicted RBP15.57■□□□□ 0.08
ATG4D-208ENST00000588667 DUX3Q96PT4 197 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 F11RQ9Y624 299 aaKnown RBP15.57■□□□□ 0.08
ATG4D-208ENST00000588667 NOTCH1P46531 2555 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 FBN3Q75N90 2809 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 ZNF705EA8MWA4 302 aaPredicted RBP15.57■□□□□ 0.08
ATG4D-208ENST00000588667 C17orf112F2Z3M2 114 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 IGHV3-11P01762 117 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 RHOGP84095 191 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 SERF2P84101 59 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 AKR1C1Q04828 323 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 FHL3Q13643 280 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 TMEM182Q6ZP80 229 aaPredicted RBP15.57■□□□□ 0.08
ATG4D-208ENST00000588667 LINC00482Q8N8I6 264 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 NECAP1Q8NC96 275 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 OR1L6Q8NGR2 347 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 RSG1Q9BU20 258 aa15.57■□□□□ 0.08
ATG4D-208ENST00000588667 OPRK1P41145 380 aa15.56■□□□□ 0.08
ATG4D-208ENST00000588667 DEFA5Q01523 94 aa15.56■□□□□ 0.08
ATG4D-208ENST00000588667 KLK9Q2XQG4 91 aa15.56■□□□□ 0.08
ATG4D-208ENST00000588667 ETFRF1Q6IPR1 90 aa15.56■□□□□ 0.08
ATG4D-208ENST00000588667 C19orf35Q6ZS72 473 aa15.56■□□□□ 0.08
ATG4D-208ENST00000588667 OR11H1Q8NG94 326 aa15.56■□□□□ 0.08
ATG4D-208ENST00000588667 NPCDR1Q9BY65 106 aa15.56■□□□□ 0.08
ATG4D-208ENST00000588667 PLA2G2EQ9NZK7 142 aa15.56■□□□□ 0.08
ATG4D-208ENST00000588667 KLK9Q9UKQ9 250 aa15.56■□□□□ 0.08
ATG4D-208ENST00000588667 LINC00862A6NCI5 91 aa15.55■□□□□ 0.08
ATG4D-208ENST00000588667 DEFA4P12838 97 aa15.55■□□□□ 0.08
ATG4D-208ENST00000588667 BLOC1S1P78537 153 aa15.55■□□□□ 0.08
ATG4D-208ENST00000588667 AKR1C8PQ5T2L2 129 aa15.55■□□□□ 0.08
ATG4D-208ENST00000588667 SLC16A13Q7RTY0 426 aa15.55■□□□□ 0.08
ATG4D-208ENST00000588667 WFDC9Q8NEX5 89 aa15.55■□□□□ 0.08
ATG4D-208ENST00000588667 SLC35E1Q96K37 410 aa15.55■□□□□ 0.08
ATG4D-208ENST00000588667 FANCD2OSQ96PS1 177 aa15.55■□□□□ 0.08
ATG4D-208ENST00000588667 OR2J3O76001 311 aa15.54■□□□□ 0.08
ATG4D-208ENST00000588667 HIST1H1BP16401 226 aaKnown RBP15.54■□□□□ 0.08
ATG4D-208ENST00000588667 CD33P20138 364 aa15.54■□□□□ 0.08
ATG4D-208ENST00000588667 ZNF616Q08AN1 781 aa15.54■□□□□ 0.08
ATG4D-208ENST00000588667 RAB31Q13636 194 aa15.54■□□□□ 0.08
ATG4D-208ENST00000588667 TEPPQ6URK8 271 aa15.54■□□□□ 0.08
ATG4D-208ENST00000588667 SLC7A5P1Q8MH63 180 aa15.54■□□□□ 0.08
ATG4D-208ENST00000588667 OR1N2Q8NGR9 330 aa15.54■□□□□ 0.08
ATG4D-208ENST00000588667 MISP3Q96FF7 219 aa15.54■□□□□ 0.08
ATG4D-208ENST00000588667 IGLV11-55A0A075B6I3 123 aa15.54■□□□□ 0.08
ATG4D-208ENST00000588667 CYB5BO43169 146 aa15.54■□□□□ 0.08
ATG4D-208ENST00000588667 CAMLGP49069 296 aa15.54■□□□□ 0.08
ATG4D-208ENST00000588667 TMEM144Q7Z5S9 345 aa15.54■□□□□ 0.08
ATG4D-208ENST00000588667 KCNIP2Q9NS61 270 aa15.54■□□□□ 0.08
ATG4D-208ENST00000588667 LSM4Q9Y4Z0 139 aaKnown RBP15.54■□□□□ 0.08
ATG4D-208ENST00000588667 RFNGQ9Y644 331 aa15.54■□□□□ 0.08
ATG4D-208ENST00000588667 MFAP2P55001 183 aa15.53■□□□□ 0.08
ATG4D-208ENST00000588667 ATP5G2Q06055 141 aa15.53■□□□□ 0.08
ATG4D-208ENST00000588667 GAMTQ14353 236 aa15.53■□□□□ 0.08
ATG4D-208ENST00000588667 C15orf32Q32M92 178 aa15.53■□□□□ 0.08
ATG4D-208ENST00000588667 ZNF343Q6P1L6 599 aa15.53■□□□□ 0.08
ATG4D-208ENST00000588667 DPPA3Q6W0C5 159 aa15.53■□□□□ 0.08
ATG4D-208ENST00000588667 DPF1Q92782 380 aa15.53■□□□□ 0.08
ATG4D-208ENST00000588667 CXorf58Q96LI9 332 aa15.53■□□□□ 0.08
ATG4D-208ENST00000588667 PFDN2Q9UHV9 154 aa15.53■□□□□ 0.08
ATG4D-208ENST00000588667 FBXL7Q9UJT9 491 aa15.53■□□□□ 0.08
ATG4D-208ENST00000588667 LINC01619G3V211 115 aa15.52■□□□□ 0.08
ATG4D-208ENST00000588667 HSPB1P04792 205 aaKnown RBP15.52■□□□□ 0.08
ATG4D-208ENST00000588667 Q6ZRG5 221 aa15.52■□□□□ 0.08
ATG4D-208ENST00000588667 FNDC4Q9H6D8 234 aaPredicted RBP15.52■□□□□ 0.08
ATG4D-208ENST00000588667 MED9Q9NWA0 146 aa15.52■□□□□ 0.08
ATG4D-208ENST00000588667 IGHV4OR15-8A0A075B7B6 117 aa15.51■□□□□ 0.07
ATG4D-208ENST00000588667 A0A087WW49 117 aa15.51■□□□□ 0.07
ATG4D-208ENST00000588667 MBP02144 154 aa15.51■□□□□ 0.07
ATG4D-208ENST00000588667 MLANAQ16655 118 aa15.51■□□□□ 0.07
ATG4D-208ENST00000588667 PXDC1Q5TGL8 231 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms