RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 C7orf66A4D0T2 115 aa9.23□□□□□ -0.93
SS18-225ENST00000585121 CLN5O75503 358 aa9.23□□□□□ -0.93
SS18-225ENST00000585121 IL5P05113 134 aa9.23□□□□□ -0.93
SS18-225ENST00000585121 BSXQ3C1V8 233 aa9.23□□□□□ -0.93
SS18-225ENST00000585121 C2orf83Q53S99 150 aa9.23□□□□□ -0.93
SS18-225ENST00000585121 ZFAND6Q6FIF0 208 aa9.23□□□□□ -0.93
SS18-225ENST00000585121 RNASEH2CQ8TDP1 164 aaKnown RBP9.23□□□□□ -0.93
SS18-225ENST00000585121 TMEM230Q96A57 120 aa9.23□□□□□ -0.93
SS18-225ENST00000585121 NARS2Q96I59 477 aaKnown RBP9.23□□□□□ -0.93
SS18-225ENST00000585121 FAM110AQ9BQ89 295 aa9.23□□□□□ -0.93
SS18-225ENST00000585121 SHPKQ9UHJ6 478 aa9.23□□□□□ -0.93
SS18-225ENST00000585121 A0A1W2PS18 150 aa9.22□□□□□ -0.93
SS18-225ENST00000585121 DNASE2O00115 360 aaPredicted RBP9.22□□□□□ -0.93
SS18-225ENST00000585121 SLC25A4P12235 298 aa9.22□□□□□ -0.93
SS18-225ENST00000585121 NPPCP23582 126 aa9.22□□□□□ -0.93
SS18-225ENST00000585121 SMCO1Q147U7 214 aa9.22□□□□□ -0.93
SS18-225ENST00000585121 ETFRF1Q6IPR1 90 aa9.22□□□□□ -0.93
SS18-225ENST00000585121 TMED4Q7Z7H5 227 aa9.22□□□□□ -0.93
SS18-225ENST00000585121 SLC24A4Q8NFF2 622 aa9.22□□□□□ -0.93
SS18-225ENST00000585121 METTL26Q96S19 204 aa9.22□□□□□ -0.93
SS18-225ENST00000585121 FNDC4Q9H6D8 234 aaPredicted RBP9.22□□□□□ -0.93
SS18-225ENST00000585121 IGKV3-7A0A075B6H7 116 aa9.21□□□□□ -0.93
SS18-225ENST00000585121 IGHV3OR16-13A0A075B7E8 117 aa9.21□□□□□ -0.93
SS18-225ENST00000585121 IGHV3-74A0A0B4J1X5 117 aa9.21□□□□□ -0.93
SS18-225ENST00000585121 UBE2CO00762 179 aa9.21□□□□□ -0.93
SS18-225ENST00000585121 IFNA10P01566 189 aa9.21□□□□□ -0.93
SS18-225ENST00000585121 TFPI2P48307 235 aa9.21□□□□□ -0.93
SS18-225ENST00000585121 RPL11P62913 178 aaKnown RBP9.21□□□□□ -0.93
SS18-225ENST00000585121 MLANAQ16655 118 aa9.21□□□□□ -0.93
SS18-225ENST00000585121 TMEM128Q5BJH2 165 aa9.21□□□□□ -0.93
SS18-225ENST00000585121 TCF24Q7RTU0 167 aa9.21□□□□□ -0.93
SS18-225ENST00000585121 LYZL2Q7Z4W2 148 aa9.21□□□□□ -0.93
SS18-225ENST00000585121 GPN1Q9HCN4 374 aaPredicted RBP9.21□□□□□ -0.93
SS18-225ENST00000585121 PRR13Q9NZ81 148 aa9.21□□□□□ -0.93
SS18-225ENST00000585121 ALG5Q9Y673 324 aa9.21□□□□□ -0.93
SS18-225ENST00000585121 U3KQ87 197 aa9.21□□□□□ -0.93
SS18-225ENST00000585121 A0A1B0GU03 582 aa9.21□□□□□ -0.94
SS18-225ENST00000585121 DUXBA0A1W2PPF3 345 aa9.21□□□□□ -0.94
SS18-225ENST00000585121 SNRPGP15A8MWD9 76 aa9.21□□□□□ -0.94
SS18-225ENST00000585121 NXPH3O95157 252 aa9.21□□□□□ -0.94
SS18-225ENST00000585121 NPY1RP25929 384 aa9.21□□□□□ -0.94
SS18-225ENST00000585121 SUPT4H1P63272 117 aaKnown RBP9.21□□□□□ -0.94
SS18-225ENST00000585121 TNFRSF9Q07011 255 aa9.21□□□□□ -0.94
SS18-225ENST00000585121 ODF3L2Q3SX64 289 aa9.21□□□□□ -0.94
SS18-225ENST00000585121 NMSQ5H8A3 153 aa9.21□□□□□ -0.94
SS18-225ENST00000585121 STPG3Q8N7X2 389 aa9.21□□□□□ -0.94
SS18-225ENST00000585121 OR1S2Q8NGQ3 325 aa9.21□□□□□ -0.94
SS18-225ENST00000585121 OR1S1Q8NH92 325 aa9.21□□□□□ -0.94
SS18-225ENST00000585121 Q8WTZ3 238 aa9.21□□□□□ -0.94
SS18-225ENST00000585121 ST8SIA2Q92186 375 aa9.21□□□□□ -0.94
SS18-225ENST00000585121 ZNF414Q96IQ9 312 aa9.21□□□□□ -0.94
SS18-225ENST00000585121 FLVCR2Q9UPI3 526 aa9.21□□□□□ -0.94
SS18-225ENST00000585121 KIR2DL5BA0A0G2JN68 375 aa9.2□□□□□ -0.94
SS18-225ENST00000585121 KIR2DL5BA0A0G2JPC4 375 aa9.2□□□□□ -0.94
SS18-225ENST00000585121 VAMP1P23763 118 aa9.2□□□□□ -0.94
SS18-225ENST00000585121 RND2P52198 227 aa9.2□□□□□ -0.94
SS18-225ENST00000585121 TIGITQ495A1 244 aa9.2□□□□□ -0.94
SS18-225ENST00000585121 FAM90A2PQ658T7 463 aa9.2□□□□□ -0.94
SS18-225ENST00000585121 WFDC3Q8IUB2 231 aa9.2□□□□□ -0.94
SS18-225ENST00000585121 KIR2DL5AQ8N109 375 aa9.2□□□□□ -0.94
SS18-225ENST00000585121 GBGT1Q8N5D6 347 aa9.2□□□□□ -0.94
SS18-225ENST00000585121 KIR2DL5BQ8NHK3 375 aa9.2□□□□□ -0.94
SS18-225ENST00000585121 DTD1Q8TEA8 209 aa9.2□□□□□ -0.94
SS18-225ENST00000585121 GRAMD2BQ96HH9 432 aa9.2□□□□□ -0.94
SS18-225ENST00000585121 VSIRQ9H7M9 311 aa9.2□□□□□ -0.94
SS18-225ENST00000585121 ZFAND3Q9H8U3 227 aa9.2□□□□□ -0.94
SS18-225ENST00000585121 HSPB7Q9UBY9 170 aa9.2□□□□□ -0.94
SS18-225ENST00000585121 RYR3Q15413 4870 aa9.19□□□□□ -0.94
SS18-225ENST00000585121 DYNC2H1Q8NCM8 4307 aaKnown RBP9.19□□□□□ -0.94
SS18-225ENST00000585121 IGHV3-66A0A0C4DH42 116 aa9.19□□□□□ -0.94
SS18-225ENST00000585121 DFFBO76075 338 aa9.19□□□□□ -0.94
SS18-225ENST00000585121 IFNA4P05014 189 aa9.19□□□□□ -0.94
SS18-225ENST00000585121 RPL35AP18077 110 aaKnown RBP9.19□□□□□ -0.94
SS18-225ENST00000585121 OR10J1P30954 320 aa9.19□□□□□ -0.94
SS18-225ENST00000585121 EIF2B2P49770 351 aaKnown RBP9.19□□□□□ -0.94
SS18-225ENST00000585121 ATP5IP56385 69 aaPredicted RBP9.19□□□□□ -0.94
SS18-225ENST00000585121 UBE2MP61081 183 aaKnown RBP9.19□□□□□ -0.94
SS18-225ENST00000585121 RRAS2P62070 204 aaPredicted RBP9.19□□□□□ -0.94
SS18-225ENST00000585121 PRSS54Q6PEW0 395 aa9.19□□□□□ -0.94
SS18-225ENST00000585121 Q6ZWC4 215 aa9.19□□□□□ -0.94
SS18-225ENST00000585121 OVOL2Q9BRP0 275 aa9.19□□□□□ -0.94
SS18-225ENST00000585121 RBKSQ9H477 322 aa9.19□□□□□ -0.94
SS18-225ENST00000585121 MRPL36Q9P0J6 103 aaKnown RBP9.19□□□□□ -0.94
SS18-225ENST00000585121 TP53TG1Q9Y2A0 90 aa9.19□□□□□ -0.94
SS18-225ENST00000585121 SPRY2O43597 315 aa9.18□□□□□ -0.94
SS18-225ENST00000585121 IGKV1-17P01599 117 aa9.18□□□□□ -0.94
SS18-225ENST00000585121 APOHP02749 345 aaPredicted RBP9.18□□□□□ -0.94
SS18-225ENST00000585121 ANXA7P20073 488 aaKnown RBP9.18□□□□□ -0.94
SS18-225ENST00000585121 CRYBB3P26998 211 aa9.18□□□□□ -0.94
SS18-225ENST00000585121 YPEL3P61236 119 aaPredicted RBP9.18□□□□□ -0.94
SS18-225ENST00000585121 APRG1Q8IVJ8 170 aa9.18□□□□□ -0.94
SS18-225ENST00000585121 ACY3Q96HD9 319 aa9.18□□□□□ -0.94
SS18-225ENST00000585121 MS4A6AQ9H2W1 248 aa9.18□□□□□ -0.94
SS18-225ENST00000585121 RABAC1Q9UI14 185 aa9.18□□□□□ -0.94
SS18-225ENST00000585121 TRAV2A0A0B4J234 112 aa9.17□□□□□ -0.94
SS18-225ENST00000585121 MED6O75586 246 aa9.17□□□□□ -0.94
SS18-225ENST00000585121 OR4E1P0C645 316 aa9.17□□□□□ -0.94
SS18-225ENST00000585121 IGLC1P0CG04 106 aa9.17□□□□□ -0.94
SS18-225ENST00000585121 AKAP14Q86UN6 197 aa9.17□□□□□ -0.94
SS18-225ENST00000585121 NPIPB3Q92617 1050 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms