RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	PRSS54	Q6PEW0	395 aa		10.06	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	LYG2	Q86SG7	212 aa		10.06	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.06	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	RNF183	Q96D59	192 aa		10.06	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	NARS2	Q96I59	477 aa	Known RBP	10.06	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	CACFD1	Q9UGQ2	172 aa		10.06	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	TP53TG1	Q9Y2A0	90 aa		10.06	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186		A0A0B4J2A0	478 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	CXorf65	A6NEN9	183 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	JTB	O76095	146 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	SLC25A4	P12235	298 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	OR10J1	P30954	320 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	CCR6	P51684	374 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	DEFB131A	P59861	70 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	SRPX	P78539	464 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	TNFRSF9	Q07011	255 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	SMCO1	Q147U7	214 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	NMS	Q5H8A3	153 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	LEMD1	Q68G75	181 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	ETFRF1	Q6IPR1	90 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	LGI3	Q8N145	548 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	FAM24B	Q8N5W8	94 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	STXBP6	Q8NFX7	210 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	OR1S2	Q8NGQ3	325 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	OR1S1	Q8NH92	325 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186		Q8WTZ3	238 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	TMEM170A	Q8WVE7	144 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	TRIM63	Q969Q1	353 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	ACY3	Q96HD9	319 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	CSTL1	Q9H114	145 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	RBKS	Q9H477	322 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	SHPK	Q9UHJ6	478 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186		V9GYH0	126 aa		10.05	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	MPTX1	A8MV57	137 aa		10.04	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	IGLC1	P0CG04	106 aa		10.04	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	VAMP1	P23763	118 aa		10.04	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	CRYBB3	P26998	211 aa		10.04	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	P2RY1	P47900	373 aa		10.04	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	RBMS2	Q15434	407 aa	Known RBP	10.04	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	NOXA1	Q86UR1	476 aa		10.04	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	DTD1	Q8TEA8	209 aa		10.04	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	NPIPB3	Q92617	1050 aa		10.04	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	GRAMD2B	Q96HH9	432 aa		10.04	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	HSPB7	Q9UBY9	170 aa		10.04	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	HYDIN	Q4G0P3	5121 aa		10.03	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	IFNA4	P05014	189 aa		10.03	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	EWSR1	Q01844	656 aa	Known RBP eCLIP	10.03	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	ZNF79	Q15937	498 aa		10.03	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186		U3KQ87	197 aa		10.03	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	PLEC	Q15149	4684 aa	Known RBP	10.02	□□□□□ -0.8
CDK5RAP3-233	ENST00000584186	TRAV2	A0A0B4J234	112 aa		10.02	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	CA1	P00915	261 aa	Predicted RBP	10.02	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	IL4	P05112	153 aa		10.02	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	HNRNPC	P07910	306 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	RD3L	P0DJH9	198 aa		10.02	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	YPEL3	P61236	119 aa	Predicted RBP	10.02	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	TMEM128	Q5BJH2	165 aa		10.02	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	CCDC190	Q86UF4	302 aa		10.02	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	ZNF688	P0C7X2	276 aa		10.01	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	INPP1	P49441	399 aa		10.01	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	EIF2B2	P49770	351 aa	Known RBP	10.01	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	SPANXN2	Q5MJ10	180 aa		10.01	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	STH	Q8IWL8	128 aa		10.01	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	TMEM217	Q8N7C4	229 aa		10.01	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	SLC25A21	Q9BQT8	299 aa	Predicted RBP	10.01	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	RBM38	Q9H0Z9	239 aa	Known RBP	10.01	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	PAIP2B	Q9ULR5	123 aa	Known RBP	10.01	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	PIGBOS1	A0A0B4J2F0	54 aa		10	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	HELT	A6NFD8	242 aa		10	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186		K7EQG2	157 aa		10	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	TOMM40	O96008	361 aa		10	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	IAPP	P10997	89 aa		10	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	DHRS2	Q13268	280 aa		10	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	PPP1R1A	Q13522	171 aa		10	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	USF2	Q15853	346 aa	Predicted RBP	10	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	OR11H2	Q8NH07	326 aa		10	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	GATAD1	Q8WUU5	269 aa		10	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	RARRES2	Q99969	163 aa		10	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	DNAH1	Q9P2D7	4330 aa		9.99	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	LINC00854	A0A1B0GVQ3	168 aa		9.99	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	DUXB	A0A1W2PPF3	345 aa		9.99	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	ZFP92	A6NM28	416 aa		9.99	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	KNCN	A6PVL3	124 aa		9.99	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	SFT2D2	O95562	160 aa		9.99	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	HOXB5	P09067	269 aa		9.99	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	PSG1	P11464	419 aa		9.99	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	C16orf54	Q6UWD8	224 aa		9.99	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	CENPS	Q8N2Z9	138 aa		9.99	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	OR51G1	Q8NGK1	321 aa		9.99	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	DCANP1	Q8TF63	244 aa		9.99	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	SLC35E1	Q96K37	410 aa		9.99	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	PBDC1	Q9BVG4	233 aa		9.99	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	SRR	Q9GZT4	340 aa		9.99	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186		U3KQE9	123 aa		9.99	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	NUPR2	A6NF83	97 aa		9.98	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	PITX3	O75364	302 aa		9.98	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	AP2S1	P53680	142 aa	Predicted RBP	9.98	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	ATP5I	P56385	69 aa	Predicted RBP	9.98	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	GAMT	Q14353	236 aa		9.98	□□□□□ -0.81
CDK5RAP3-233	ENST00000584186	PSMG4	Q5JS54	123 aa		9.98	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms