RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 SRRQ9GZT4 340 aa9.35□□□□□ -0.91
CDK5RAP3-222ENST00000581708 TMED3Q9Y3Q3 217 aa9.35□□□□□ -0.91
CDK5RAP3-222ENST00000581708 IFNA10P01566 189 aa9.34□□□□□ -0.91
CDK5RAP3-222ENST00000581708 IGLC1P0CG04 106 aa9.34□□□□□ -0.91
CDK5RAP3-222ENST00000581708 ATF4P18848 351 aaPredicted RBP9.34□□□□□ -0.91
CDK5RAP3-222ENST00000581708 EIF2B2P49770 351 aaKnown RBP9.34□□□□□ -0.91
CDK5RAP3-222ENST00000581708 TMED4Q7Z7H5 227 aa9.34□□□□□ -0.91
CDK5RAP3-222ENST00000581708 CENPSQ8N2Z9 138 aa9.34□□□□□ -0.91
CDK5RAP3-222ENST00000581708 STPG3Q8N7X2 389 aa9.34□□□□□ -0.91
CDK5RAP3-222ENST00000581708 DTD1Q8TEA8 209 aa9.34□□□□□ -0.91
CDK5RAP3-222ENST00000581708 ST8SIA2Q92186 375 aa9.34□□□□□ -0.91
CDK5RAP3-222ENST00000581708 GRAMD2BQ96HH9 432 aa9.34□□□□□ -0.91
CDK5RAP3-222ENST00000581708 PITX3O75364 302 aa9.33□□□□□ -0.92
CDK5RAP3-222ENST00000581708 MED6O75586 246 aa9.33□□□□□ -0.92
CDK5RAP3-222ENST00000581708 SFT2D2O95562 160 aa9.33□□□□□ -0.92
CDK5RAP3-222ENST00000581708 VAMP1P23763 118 aa9.33□□□□□ -0.92
CDK5RAP3-222ENST00000581708 OR10J1P30954 320 aa9.33□□□□□ -0.92
CDK5RAP3-222ENST00000581708 GPX4P36969 197 aaPredicted RBP9.33□□□□□ -0.92
CDK5RAP3-222ENST00000581708 INPP1P49441 399 aa9.33□□□□□ -0.92
CDK5RAP3-222ENST00000581708 RND2P52198 227 aa9.33□□□□□ -0.92
CDK5RAP3-222ENST00000581708 MLANAQ16655 118 aa9.33□□□□□ -0.92
CDK5RAP3-222ENST00000581708 CNPY1Q3B7I2 92 aa9.33□□□□□ -0.92
CDK5RAP3-222ENST00000581708 OR1S1Q8NH92 325 aa9.33□□□□□ -0.92
CDK5RAP3-222ENST00000581708 TMEM170AQ8WVE7 144 aa9.33□□□□□ -0.92
CDK5RAP3-222ENST00000581708 C7orf50Q9BRJ6 194 aaKnown RBP9.33□□□□□ -0.92
CDK5RAP3-222ENST00000581708 OVOL2Q9BRP0 275 aa9.33□□□□□ -0.92
CDK5RAP3-222ENST00000581708 RETNQ9HD89 108 aa9.33□□□□□ -0.92
CDK5RAP3-222ENST00000581708 MRPL36Q9P0J6 103 aaKnown RBP9.33□□□□□ -0.92
CDK5RAP3-222ENST00000581708 UBQLN2Q9UHD9 624 aa9.33□□□□□ -0.92
CDK5RAP3-222ENST00000581708 IGHV3-49A0A0A0MS15 119 aa9.32□□□□□ -0.92
CDK5RAP3-222ENST00000581708 HELTA6NFD8 242 aa9.32□□□□□ -0.92
CDK5RAP3-222ENST00000581708 CENPXA8MT69 81 aa9.32□□□□□ -0.92
CDK5RAP3-222ENST00000581708 DNASE2O00115 360 aaPredicted RBP9.32□□□□□ -0.92
CDK5RAP3-222ENST00000581708 FABP1P07148 127 aa9.32□□□□□ -0.92
CDK5RAP3-222ENST00000581708 NUP62P37198 522 aaPredicted RBP9.32□□□□□ -0.92
CDK5RAP3-222ENST00000581708 AP2S1P53680 142 aaPredicted RBP9.32□□□□□ -0.92
CDK5RAP3-222ENST00000581708 RPP30P78346 268 aaKnown RBP9.32□□□□□ -0.92
CDK5RAP3-222ENST00000581708 TIGITQ495A1 244 aa9.32□□□□□ -0.92
CDK5RAP3-222ENST00000581708 TRIQKQ629K1 86 aa9.32□□□□□ -0.92
CDK5RAP3-222ENST00000581708 CIB3Q96Q77 187 aaPredicted RBP9.32□□□□□ -0.92
CDK5RAP3-222ENST00000581708 MS4A6AQ9H2W1 248 aa9.32□□□□□ -0.92
CDK5RAP3-222ENST00000581708 RBKSQ9H477 322 aa9.32□□□□□ -0.92
CDK5RAP3-222ENST00000581708 MAP6D1Q9H9H5 199 aa9.32□□□□□ -0.92
CDK5RAP3-222ENST00000581708 PRR13Q9NZ81 148 aa9.32□□□□□ -0.92
CDK5RAP3-222ENST00000581708 PFDN2Q9UHV9 154 aa9.32□□□□□ -0.92
CDK5RAP3-222ENST00000581708 U3KQE9 123 aa9.32□□□□□ -0.92
CDK5RAP3-222ENST00000581708 SPRY2O43597 315 aa9.31□□□□□ -0.92
CDK5RAP3-222ENST00000581708 TOMM40O96008 361 aa9.31□□□□□ -0.92
CDK5RAP3-222ENST00000581708 APOHP02749 345 aaPredicted RBP9.31□□□□□ -0.92
CDK5RAP3-222ENST00000581708 IFNA4P05014 189 aa9.31□□□□□ -0.92
CDK5RAP3-222ENST00000581708 HNRNPCP07910 306 aaKnown RBP eCLIP9.31□□□□□ -0.92
CDK5RAP3-222ENST00000581708 RD3LP0DJH9 198 aa9.31□□□□□ -0.92
CDK5RAP3-222ENST00000581708 P2RY1P47900 373 aa9.31□□□□□ -0.92
CDK5RAP3-222ENST00000581708 RAB11AP62491 216 aa9.31□□□□□ -0.92
CDK5RAP3-222ENST00000581708 GATAD1Q8WUU5 269 aa9.31□□□□□ -0.92
CDK5RAP3-222ENST00000581708 NPIPB3Q92617 1050 aa9.31□□□□□ -0.92
CDK5RAP3-222ENST00000581708 RNF183Q96D59 192 aa9.31□□□□□ -0.92
CDK5RAP3-222ENST00000581708 SEPSECSQ9HD40 501 aaKnown RBP9.31□□□□□ -0.92
CDK5RAP3-222ENST00000581708 IGHV3OR16-13A0A075B7E8 117 aa9.3□□□□□ -0.92
CDK5RAP3-222ENST00000581708 IGHV3-74A0A0B4J1X5 117 aa9.3□□□□□ -0.92
CDK5RAP3-222ENST00000581708 MPTX1A8MV57 137 aa9.3□□□□□ -0.92
CDK5RAP3-222ENST00000581708 NDUFB6O95139 128 aa9.3□□□□□ -0.92
CDK5RAP3-222ENST00000581708 RPL11P62913 178 aaKnown RBP9.3□□□□□ -0.92
CDK5RAP3-222ENST00000581708 PPP1R1AQ13522 171 aa9.3□□□□□ -0.92
CDK5RAP3-222ENST00000581708 TMEM41BQ5BJD5 291 aa9.3□□□□□ -0.92
CDK5RAP3-222ENST00000581708 LILRB2Q8N423 598 aa9.3□□□□□ -0.92
CDK5RAP3-222ENST00000581708 GBGT1Q8N5D6 347 aa9.3□□□□□ -0.92
CDK5RAP3-222ENST00000581708 TMEM217Q8N7C4 229 aa9.3□□□□□ -0.92
CDK5RAP3-222ENST00000581708 CSTL1Q9H114 145 aa9.3□□□□□ -0.92
CDK5RAP3-222ENST00000581708 K7EQG2 157 aa9.29□□□□□ -0.92
CDK5RAP3-222ENST00000581708 NXPH3O95157 252 aa9.29□□□□□ -0.92
CDK5RAP3-222ENST00000581708 IL4P05112 153 aa9.29□□□□□ -0.92
CDK5RAP3-222ENST00000581708 TFPI2P48307 235 aa9.29□□□□□ -0.92
CDK5RAP3-222ENST00000581708 BAK1Q16611 211 aa9.29□□□□□ -0.92
CDK5RAP3-222ENST00000581708 ZFAND6Q6FIF0 208 aa9.29□□□□□ -0.92
CDK5RAP3-222ENST00000581708 OR8G2PQ6IF36 304 aa9.29□□□□□ -0.92
CDK5RAP3-222ENST00000581708 LINC00299Q6ZSB3 139 aa9.29□□□□□ -0.92
CDK5RAP3-222ENST00000581708 APRG1Q8IVJ8 170 aa9.29□□□□□ -0.92
CDK5RAP3-222ENST00000581708 COQ8AQ8NI60 647 aa9.29□□□□□ -0.92
CDK5RAP3-222ENST00000581708 ACY3Q96HD9 319 aa9.29□□□□□ -0.92
CDK5RAP3-222ENST00000581708 SLC35E1Q96K37 410 aa9.29□□□□□ -0.92
CDK5RAP3-222ENST00000581708 RYR3Q15413 4870 aa9.29□□□□□ -0.92
CDK5RAP3-222ENST00000581708 CSMD3Q7Z407 3707 aa9.29□□□□□ -0.92
CDK5RAP3-222ENST00000581708 IGKV3-7A0A075B6H7 116 aa9.28□□□□□ -0.92
CDK5RAP3-222ENST00000581708 LCE6AA0A183 80 aa9.28□□□□□ -0.92
CDK5RAP3-222ENST00000581708 C9orf170A2RU37 121 aa9.28□□□□□ -0.92
CDK5RAP3-222ENST00000581708 SYNGR2O43760 224 aa9.28□□□□□ -0.92
CDK5RAP3-222ENST00000581708 CFDP00746 253 aaPredicted RBP9.28□□□□□ -0.92
CDK5RAP3-222ENST00000581708 DEFB135Q30KP9 77 aa9.28□□□□□ -0.92
CDK5RAP3-222ENST00000581708 C16orf54Q6UWD8 224 aa9.28□□□□□ -0.92
CDK5RAP3-222ENST00000581708 OR51G1Q8NGK1 321 aa9.28□□□□□ -0.92
CDK5RAP3-222ENST00000581708 DCANP1Q8TF63 244 aa9.28□□□□□ -0.92
CDK5RAP3-222ENST00000581708 GLMPQ8WWB7 406 aa9.28□□□□□ -0.92
CDK5RAP3-222ENST00000581708 RABAC1Q9UI14 185 aa9.28□□□□□ -0.92
CDK5RAP3-222ENST00000581708 DYNC2H1Q8NCM8 4307 aaKnown RBP9.27□□□□□ -0.93
CDK5RAP3-222ENST00000581708 IGHV3-66A0A0C4DH42 116 aa9.27□□□□□ -0.93
CDK5RAP3-222ENST00000581708 ZFP92A6NM28 416 aa9.27□□□□□ -0.93
CDK5RAP3-222ENST00000581708 BUB3O43684 328 aa9.27□□□□□ -0.93
CDK5RAP3-222ENST00000581708 IFNA21P01568 189 aa9.27□□□□□ -0.93
CDK5RAP3-222ENST00000581708 PSG1P11464 419 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms