RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 RAB3CQ96E17 227 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 ADTRPQ96IZ2 230 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 FYTTD1Q96QD9 318 aaKnown RBP4.26□□□□□ -1.73
SMG6-219ENST00000575663 OR2A7Q96R45 310 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 SLC25A21Q9BQT8 299 aaPredicted RBP4.26□□□□□ -1.73
SMG6-219ENST00000575663 ZNF2Q9BSG1 426 aaPredicted RBP4.26□□□□□ -1.73
SMG6-219ENST00000575663 NICN1Q9BSH3 213 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 FAAP24Q9BTP7 215 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 CHRDL1Q9BU40 450 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 C20orf24Q9BUV8 137 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 SLC2A9Q9NRM0 540 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 PLEKHJ1Q9NW61 149 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 THYN1Q9P016 225 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 ANAPC10Q9UM13 185 aa4.26□□□□□ -1.73
SMG6-219ENST00000575663 RBM7Q9Y580 266 aaKnown RBP4.26□□□□□ -1.73
SMG6-219ENST00000575663 TRBV6-6A0A0A6YYG2 114 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 PIGBOS1A0A0B4J2F0 54 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 FAM240BA0A1B0GVZ2 78 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 HELTA6NFD8 242 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 ZNF705EA8MWA4 302 aaPredicted RBP4.25□□□□□ -1.73
SMG6-219ENST00000575663 TEX22C9J3V5 150 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 MFNGO00587 321 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 CCSO14618 274 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 PLA2G10O15496 165 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 TGOLN2O43493 480 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 PRAF2O60831 178 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 AKAIN1P0CW23 69 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 TRAPPC2P0DI81 140 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 TRAPPC2BP0DI82 140 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 RBMY1CP0DJD4 496 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 RPA2P15927 270 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 HIST1H1DP16402 221 aaKnown RBP4.25□□□□□ -1.73
SMG6-219ENST00000575663 RPL27AP46776 148 aaKnown RBP4.25□□□□□ -1.73
SMG6-219ENST00000575663 TFPI2P48307 235 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 TAS2R46P59540 309 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 PAFAH1B2P68402 229 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 KLF9Q13886 244 aaPredicted RBP4.25□□□□□ -1.73
SMG6-219ENST00000575663 GUK1Q16774 197 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 C19orf35Q6ZS72 473 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 SPATA12Q7Z6I5 190 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 STHQ8IWL8 128 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 C6orf223Q8N319 242 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 ARRDC1Q8N5I2 433 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 CLRN3Q8NCR9 226 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 GLMPQ8WWB7 406 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 MRGPRFQ96AM1 343 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 RNF125Q96EQ8 232 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 CYYR1Q96J86 154 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 FAM210BQ96KR6 192 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 SCGB3A2Q96PL1 93 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 FANCD2OSQ96PS1 177 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 PRRT1Q99946 306 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 MARVELD1Q9BSK0 173 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 SCP2D1Q9UJQ7 156 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 TBC1D24Q9ULP9 559 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 KCNIP3Q9Y2W7 256 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 GOLT1BQ9Y3E0 138 aa4.25□□□□□ -1.73
SMG6-219ENST00000575663 IGKV3-7A0A075B6H7 116 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 IGLV11-55A0A075B6I3 123 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 ELOA3CA0A087WX78 387 aaPredicted RBP4.24□□□□□ -1.73
SMG6-219ENST00000575663 NDUFA4O00483 81 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 SNAPC5O75971 98 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 DFFBO76075 338 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 KBTBD11O94819 623 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 CD5P06127 495 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 SPP1P10451 314 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 MAS1LP35410 378 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 RFX2P48378 723 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 TMEM50BP56557 158 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 FAM3BP58499 235 aaPredicted RBP4.24□□□□□ -1.73
SMG6-219ENST00000575663 UBE2MP61081 183 aaKnown RBP4.24□□□□□ -1.73
SMG6-219ENST00000575663 BLOC1S1P78537 153 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 ARFRP1Q13795 201 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 SURF2Q15527 256 aaPredicted RBP4.24□□□□□ -1.73
SMG6-219ENST00000575663 C12orf74Q32Q52 190 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 ZFP69Q49AA0 526 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 MORN3Q6PF18 240 aaPredicted RBP4.24□□□□□ -1.73
SMG6-219ENST00000575663 SPSB3Q6PJ21 355 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 HOGA1Q86XE5 327 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 SNX29P2Q8IUI4 249 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 OR52I2Q8NH67 350 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 ZNF502Q8TBZ5 544 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 ASB13Q8WXK3 278 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 FRZBQ92765 325 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 RRNAD1Q96FB5 475 aaKnown RBP4.24□□□□□ -1.73
SMG6-219ENST00000575663 PACRGQ96M98 296 aaPredicted RBP4.24□□□□□ -1.73
SMG6-219ENST00000575663 NIT2Q9NQR4 276 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 TMEM14BQ9NUH8 114 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 CELA1Q9UNI1 258 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 TMED3Q9Y3Q3 217 aa4.24□□□□□ -1.73
SMG6-219ENST00000575663 TEX48A0A1B0GUV7 120 aa4.23□□□□□ -1.73
SMG6-219ENST00000575663 A0A1B0GV72 72 aa4.23□□□□□ -1.73
SMG6-219ENST00000575663 A0A1B0GW64 132 aa4.23□□□□□ -1.73
SMG6-219ENST00000575663 A0A1W2PPV4 95 aa4.23□□□□□ -1.73
SMG6-219ENST00000575663 OR2T8A6NH00 312 aa4.23□□□□□ -1.73
SMG6-219ENST00000575663 C15orf62A8K5M9 175 aa4.23□□□□□ -1.73
SMG6-219ENST00000575663 TRDCB7Z8K6 153 aa4.23□□□□□ -1.73
SMG6-219ENST00000575663 DISC1C4P0D8 188 aa4.23□□□□□ -1.73
SMG6-219ENST00000575663 J3QL48 77 aa4.23□□□□□ -1.73
SMG6-219ENST00000575663 K7EMT4 169 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms