RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 IGHV3OR16-13A0A075B7E8 117 aa12.79□□□□□ -0.36
SMG6-212ENST00000573153 IGHV3-74A0A0B4J1X5 117 aa12.79□□□□□ -0.36
SMG6-212ENST00000573153 TRAV2A0A0B4J234 112 aa12.79□□□□□ -0.36
SMG6-212ENST00000573153 NAP1L6A6NFF2 107 aa12.79□□□□□ -0.36
SMG6-212ENST00000573153 IGLC1P0CG04 106 aa12.79□□□□□ -0.36
SMG6-212ENST00000573153 CRYBB3P26998 211 aa12.79□□□□□ -0.36
SMG6-212ENST00000573153 CMC4P56277 68 aaPredicted RBP12.79□□□□□ -0.36
SMG6-212ENST00000573153 EWSR1Q01844 656 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMG6-212ENST00000573153 RBMS2Q15434 407 aaKnown RBP12.79□□□□□ -0.36
SMG6-212ENST00000573153 ZNF124Q15973 351 aa12.79□□□□□ -0.36
SMG6-212ENST00000573153 ETFRF1Q6IPR1 90 aa12.79□□□□□ -0.36
SMG6-212ENST00000573153 OR1S2Q8NGQ3 325 aa12.79□□□□□ -0.36
SMG6-212ENST00000573153 DTD1Q8TEA8 209 aa12.79□□□□□ -0.36
SMG6-212ENST00000573153 ST8SIA2Q92186 375 aa12.79□□□□□ -0.36
SMG6-212ENST00000573153 SDHCQ99643 169 aaPredicted RBP12.79□□□□□ -0.36
SMG6-212ENST00000573153 SFT2D2O95562 160 aa12.78□□□□□ -0.36
SMG6-212ENST00000573153 YPEL3P61236 119 aaPredicted RBP12.78□□□□□ -0.36
SMG6-212ENST00000573153 BAK1Q16611 211 aa12.78□□□□□ -0.36
SMG6-212ENST00000573153 WFDC3Q8IUB2 231 aa12.78□□□□□ -0.36
SMG6-212ENST00000573153 CENPSQ8N2Z9 138 aa12.78□□□□□ -0.36
SMG6-212ENST00000573153 RBKSQ9H477 322 aa12.78□□□□□ -0.36
SMG6-212ENST00000573153 TMEM231Q9H6L2 316 aa12.78□□□□□ -0.36
SMG6-212ENST00000573153 KIR2DL5BA0A0G2JN68 375 aa12.77□□□□□ -0.37
SMG6-212ENST00000573153 KIR2DL5BA0A0G2JPC4 375 aa12.77□□□□□ -0.37
SMG6-212ENST00000573153 FAM90A26D6RGX4 464 aa12.77□□□□□ -0.37
SMG6-212ENST00000573153 NPPCP23582 126 aa12.77□□□□□ -0.37
SMG6-212ENST00000573153 VAMP1P23763 118 aa12.77□□□□□ -0.37
SMG6-212ENST00000573153 RND2P52198 227 aa12.77□□□□□ -0.37
SMG6-212ENST00000573153 PPP1R1AQ13522 171 aa12.77□□□□□ -0.37
SMG6-212ENST00000573153 TIGITQ495A1 244 aa12.77□□□□□ -0.37
SMG6-212ENST00000573153 TCF24Q7RTU0 167 aa12.77□□□□□ -0.37
SMG6-212ENST00000573153 KIR2DL5AQ8N109 375 aa12.77□□□□□ -0.37
SMG6-212ENST00000573153 KIR2DL5BQ8NHK3 375 aa12.77□□□□□ -0.37
SMG6-212ENST00000573153 TP53TG1Q9Y2A0 90 aa12.77□□□□□ -0.37
SMG6-212ENST00000573153 TMED3Q9Y3Q3 217 aa12.77□□□□□ -0.37
SMG6-212ENST00000573153 U3KQE9 123 aa12.77□□□□□ -0.37
SMG6-212ENST00000573153 A0A1W2PS18 150 aa12.76□□□□□ -0.37
SMG6-212ENST00000573153 UBE2CO00762 179 aa12.76□□□□□ -0.37
SMG6-212ENST00000573153 NDUFB6O95139 128 aa12.76□□□□□ -0.37
SMG6-212ENST00000573153 NXPH3O95157 252 aa12.76□□□□□ -0.37
SMG6-212ENST00000573153 OR10J1P30954 320 aa12.76□□□□□ -0.37
SMG6-212ENST00000573153 APOC4P55056 127 aa12.76□□□□□ -0.37
SMG6-212ENST00000573153 PAFAH1B2P68402 229 aa12.76□□□□□ -0.37
SMG6-212ENST00000573153 TRIQKQ629K1 86 aa12.76□□□□□ -0.37
SMG6-212ENST00000573153 Q6ZWC4 215 aa12.76□□□□□ -0.37
SMG6-212ENST00000573153 FAM24BQ8N5W8 94 aa12.76□□□□□ -0.37
SMG6-212ENST00000573153 OR1S1Q8NH92 325 aa12.76□□□□□ -0.37
SMG6-212ENST00000573153 METTL26Q96S19 204 aa12.76□□□□□ -0.37
SMG6-212ENST00000573153 MAP6D1Q9H9H5 199 aa12.76□□□□□ -0.37
SMG6-212ENST00000573153 IFNA10P01566 189 aa12.75□□□□□ -0.37
SMG6-212ENST00000573153 APRG1Q8IVJ8 170 aa12.75□□□□□ -0.37
SMG6-212ENST00000573153 C7orf50Q9BRJ6 194 aaKnown RBP12.75□□□□□ -0.37
SMG6-212ENST00000573153 DFFBO76075 338 aa12.74□□□□□ -0.37
SMG6-212ENST00000573153 BTCP35070 178 aa12.74□□□□□ -0.37
SMG6-212ENST00000573153 GPX4P36969 197 aaPredicted RBP12.74□□□□□ -0.37
SMG6-212ENST00000573153 Q8WTZ3 238 aa12.74□□□□□ -0.37
SMG6-212ENST00000573153 NPIPB3Q92617 1050 aa12.74□□□□□ -0.37
SMG6-212ENST00000573153 MS4A6AQ9H2W1 248 aa12.74□□□□□ -0.37
SMG6-212ENST00000573153 IGHV3-66A0A0C4DH42 116 aa12.73□□□□□ -0.37
SMG6-212ENST00000573153 TOMM40O96008 361 aa12.73□□□□□ -0.37
SMG6-212ENST00000573153 INPP1P49441 399 aa12.73□□□□□ -0.37
SMG6-212ENST00000573153 DEFB135Q30KP9 77 aa12.73□□□□□ -0.37
SMG6-212ENST00000573153 IL17DQ8TAD2 202 aa12.73□□□□□ -0.37
SMG6-212ENST00000573153 RNF183Q96D59 192 aa12.73□□□□□ -0.37
SMG6-212ENST00000573153 C9orf170A2RU37 121 aa12.72□□□□□ -0.37
SMG6-212ENST00000573153 MED6O75586 246 aa12.72□□□□□ -0.37
SMG6-212ENST00000573153 IL7P13232 177 aa12.72□□□□□ -0.37
SMG6-212ENST00000573153 P2RY1P47900 373 aa12.72□□□□□ -0.37
SMG6-212ENST00000573153 TFPI2P48307 235 aa12.72□□□□□ -0.37
SMG6-212ENST00000573153 CNPY1Q3B7I2 92 aa12.72□□□□□ -0.37
SMG6-212ENST00000573153 GBGT1Q8N5D6 347 aa12.72□□□□□ -0.37
SMG6-212ENST00000573153 NARS2Q96I59 477 aaKnown RBP12.72□□□□□ -0.37
SMG6-212ENST00000573153 CIB3Q96Q77 187 aaPredicted RBP12.72□□□□□ -0.37
SMG6-212ENST00000573153 IGKV3-7A0A075B6H7 116 aa12.71□□□□□ -0.37
SMG6-212ENST00000573153 CENPXA8MT69 81 aa12.71□□□□□ -0.37
SMG6-212ENST00000573153 IFNA4P05014 189 aa12.71□□□□□ -0.37
SMG6-212ENST00000573153 HNRNPCP07910 306 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMG6-212ENST00000573153 RPL35AP18077 110 aaKnown RBP12.71□□□□□ -0.37
SMG6-212ENST00000573153 GGNBP1Q5YKI7 109 aa12.71□□□□□ -0.37
SMG6-212ENST00000573153 STPG3Q8N7X2 389 aa12.71□□□□□ -0.37
SMG6-212ENST00000573153 ACY3Q96HD9 319 aa12.71□□□□□ -0.37
SMG6-212ENST00000573153 GRAMD2BQ96HH9 432 aa12.71□□□□□ -0.37
SMG6-212ENST00000573153 A0A0J9YWU9 116 aa12.7□□□□□ -0.38
SMG6-212ENST00000573153 K7EQG2 157 aa12.7□□□□□ -0.38
SMG6-212ENST00000573153 DNASE2O00115 360 aaPredicted RBP12.7□□□□□ -0.38
SMG6-212ENST00000573153 SPRY2O43597 315 aa12.7□□□□□ -0.38
SMG6-212ENST00000573153 RD3LP0DJH9 198 aa12.7□□□□□ -0.38
SMG6-212ENST00000573153 DHRS2Q13268 280 aa12.7□□□□□ -0.38
SMG6-212ENST00000573153 GAMTQ14353 236 aa12.7□□□□□ -0.38
SMG6-212ENST00000573153 USF2Q15853 346 aaPredicted RBP12.7□□□□□ -0.38
SMG6-212ENST00000573153 C16orf54Q6UWD8 224 aa12.7□□□□□ -0.38
SMG6-212ENST00000573153 LINC00299Q6ZSB3 139 aa12.7□□□□□ -0.38
SMG6-212ENST00000573153 DCANP1Q8TF63 244 aa12.7□□□□□ -0.38
SMG6-212ENST00000573153 GLMPQ8WWB7 406 aa12.7□□□□□ -0.38
SMG6-212ENST00000573153 IGKV1D-37A0A075B6S9 117 aa12.69□□□□□ -0.38
SMG6-212ENST00000573153 HELTA6NFD8 242 aa12.69□□□□□ -0.38
SMG6-212ENST00000573153 PRSS46E5RG02 174 aa12.69□□□□□ -0.38
SMG6-212ENST00000573153 SYNGR2O43760 224 aa12.69□□□□□ -0.38
SMG6-212ENST00000573153 IL4P05112 153 aa12.69□□□□□ -0.38
SMG6-212ENST00000573153 HOXB5P09067 269 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms