RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 SPCS2Q15005 226 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 CEMP1Q6PRD7 247 aaPredicted RBP7.19□□□□□ -1.26
CIITA-207ENST00000571545 APRG1Q8IVJ8 170 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 STHQ8IWL8 128 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 GBGT1Q8N5D6 347 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 Q8WTZ3 238 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 DEDD2Q8WXF8 326 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 ZNF414Q96IQ9 312 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 RARRES2Q99969 163 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 RTBDNQ9BSG5 229 aaPredicted RBP7.19□□□□□ -1.26
CIITA-207ENST00000571545 RABAC1Q9UI14 185 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 GPR132Q9UNW8 380 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 TMEM56-RWDD3S4R434 201 aa7.19□□□□□ -1.26
CIITA-207ENST00000571545 CSMD3Q7Z407 3707 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 IGHV3OR16-13A0A075B7E8 117 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 IGHV3-74A0A0B4J1X5 117 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 A0A0B4J2A0 478 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 DUXBA0A1W2PPF3 345 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 ANKRD20A5PA0PJZ0 165 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 CA1P00915 261 aaPredicted RBP7.18□□□□□ -1.26
CIITA-207ENST00000571545 FABP1P07148 127 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 HNRNPCP07910 306 aaKnown RBP eCLIP7.18□□□□□ -1.26
CIITA-207ENST00000571545 SPP1P10451 314 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 NPY1RP25929 384 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 CCR6P51684 374 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 FAAP20Q6NZ36 180 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 MORN3Q6PF18 240 aaPredicted RBP7.18□□□□□ -1.26
CIITA-207ENST00000571545 SELENOHQ8IZQ5 122 aaKnown RBP7.18□□□□□ -1.26
CIITA-207ENST00000571545 STXBP6Q8NFX7 210 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 OR51S1Q8NGJ8 323 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 DYNC2LI1Q8TCX1 351 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 LINC00476Q8WZB0 136 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 FNDC4Q9H6D8 234 aaPredicted RBP7.18□□□□□ -1.26
CIITA-207ENST00000571545 MCUBQ9NWR8 336 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 SHPKQ9UHJ6 478 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 U3KQ87 197 aa7.18□□□□□ -1.26
CIITA-207ENST00000571545 A0A0G2JRQ6 117 aa7.17□□□□□ -1.26
CIITA-207ENST00000571545 A0A1B0GU03 582 aa7.17□□□□□ -1.26
CIITA-207ENST00000571545 FABP12A6NFH5 140 aa7.17□□□□□ -1.26
CIITA-207ENST00000571545 IFNA10P01566 189 aa7.17□□□□□ -1.26
CIITA-207ENST00000571545 IGLC1P0CG04 106 aa7.17□□□□□ -1.26
CIITA-207ENST00000571545 OR10J1P30954 320 aa7.17□□□□□ -1.26
CIITA-207ENST00000571545 RND2P52198 227 aa7.17□□□□□ -1.26
CIITA-207ENST00000571545 DEFB131AP59861 70 aa7.17□□□□□ -1.26
CIITA-207ENST00000571545 SNRPD3P62318 126 aaKnown RBP7.17□□□□□ -1.26
CIITA-207ENST00000571545 TMEM187Q14656 261 aa7.17□□□□□ -1.26
CIITA-207ENST00000571545 SMCO1Q147U7 214 aa7.17□□□□□ -1.26
CIITA-207ENST00000571545 NMSQ5H8A3 153 aa7.17□□□□□ -1.26
CIITA-207ENST00000571545 LGI3Q8N145 548 aa7.17□□□□□ -1.26
CIITA-207ENST00000571545 CENPSQ8N2Z9 138 aa7.17□□□□□ -1.26
CIITA-207ENST00000571545 LHFPL5Q8TAF8 219 aa7.17□□□□□ -1.26
CIITA-207ENST00000571545 SEPSECSQ9HD40 501 aaKnown RBP7.17□□□□□ -1.26
CIITA-207ENST00000571545 K7EQG2 157 aa7.16□□□□□ -1.26
CIITA-207ENST00000571545 LY6G6CO95867 125 aa7.16□□□□□ -1.26
CIITA-207ENST00000571545 IGKV1-17P01599 117 aa7.16□□□□□ -1.26
CIITA-207ENST00000571545 IFNA4P05014 189 aa7.16□□□□□ -1.26
CIITA-207ENST00000571545 AKR1C4P17516 323 aa7.16□□□□□ -1.26
CIITA-207ENST00000571545 TCTAP57738 103 aa7.16□□□□□ -1.26
CIITA-207ENST00000571545 NUTF2P61970 127 aaKnown RBP7.16□□□□□ -1.26
CIITA-207ENST00000571545 PRSS54Q6PEW0 395 aa7.16□□□□□ -1.26
CIITA-207ENST00000571545 Q6ZRM9 215 aa7.16□□□□□ -1.26
CIITA-207ENST00000571545 OR11H2Q8NH07 326 aa7.16□□□□□ -1.26
CIITA-207ENST00000571545 MCFD2Q8NI22 146 aa7.16□□□□□ -1.26
CIITA-207ENST00000571545 GPR146Q96CH1 333 aa7.16□□□□□ -1.26
CIITA-207ENST00000571545 SLIRPQ9GZT3 109 aaKnown RBP7.16□□□□□ -1.26
CIITA-207ENST00000571545 HSPB7Q9UBY9 170 aa7.16□□□□□ -1.26
CIITA-207ENST00000571545 IGHV3-66A0A0C4DH42 116 aa7.15□□□□□ -1.26
CIITA-207ENST00000571545 H3BMQ9 156 aa7.15□□□□□ -1.26
CIITA-207ENST00000571545 TOMM40O96008 361 aa7.15□□□□□ -1.26
CIITA-207ENST00000571545 APOHP02749 345 aaPredicted RBP7.15□□□□□ -1.26
CIITA-207ENST00000571545 IL4P05112 153 aa7.15□□□□□ -1.26
CIITA-207ENST00000571545 RD3LP0DJH9 198 aa7.15□□□□□ -1.26
CIITA-207ENST00000571545 S100A7P31151 101 aa7.15□□□□□ -1.26
CIITA-207ENST00000571545 S100A5P33763 92 aa7.15□□□□□ -1.26
CIITA-207ENST00000571545 RPP30P78346 268 aaKnown RBP7.15□□□□□ -1.26
CIITA-207ENST00000571545 RBMS2Q15434 407 aaKnown RBP7.15□□□□□ -1.26
CIITA-207ENST00000571545 TIGITQ495A1 244 aa7.15□□□□□ -1.26
CIITA-207ENST00000571545 SAMD13Q5VXD3 122 aa7.15□□□□□ -1.26
CIITA-207ENST00000571545 LEMD1Q68G75 181 aa7.15□□□□□ -1.26
CIITA-207ENST00000571545 OR8G2PQ6IF36 304 aa7.15□□□□□ -1.26
CIITA-207ENST00000571545 TOMM5Q8N4H5 51 aa7.15□□□□□ -1.26
CIITA-207ENST00000571545 OR1S1Q8NH92 325 aa7.15□□□□□ -1.26
CIITA-207ENST00000571545 C11orf45Q8TAV5 145 aa7.15□□□□□ -1.26
CIITA-207ENST00000571545 DTD1Q8TEA8 209 aa7.15□□□□□ -1.26
CIITA-207ENST00000571545 PHLDA1Q8WV24 401 aaPredicted RBP7.15□□□□□ -1.26
CIITA-207ENST00000571545 SLC25A21Q9BQT8 299 aaPredicted RBP7.15□□□□□ -1.26
CIITA-207ENST00000571545 C1QTNF4Q9BXJ3 329 aa7.15□□□□□ -1.26
CIITA-207ENST00000571545 C11orf94C9JXX5 98 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 FAM90A26D6RGX4 464 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 MED6O75586 246 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 ZNF688P0C7X2 276 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 SLC25A6P12236 298 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 MIFP14174 115 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 TNFSF8P32971 234 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 RAB11AP62491 216 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 DHRS2Q13268 280 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 ZNF124Q15973 351 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 TMEM128Q5BJH2 165 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 TRPT1Q86TN4 253 aaKnown RBP7.14□□□□□ -1.27
CIITA-207ENST00000571545 OR51G1Q8NGK1 321 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms