RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, human

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD4-223	ENST00000568301	FAM219A	Q8IW50	185 aa		10.87	□□□□□ -0.67
COMMD4-223	ENST00000568301	CCDC71L	Q8N9Z2	235 aa		10.87	□□□□□ -0.67
COMMD4-223	ENST00000568301	OR52E5	Q8NH55	327 aa		10.87	□□□□□ -0.67
COMMD4-223	ENST00000568301		Q8WTZ3	238 aa		10.87	□□□□□ -0.67
COMMD4-223	ENST00000568301	RAB40C	Q96S21	281 aa		10.87	□□□□□ -0.67
COMMD4-223	ENST00000568301	RNF126	Q9BV68	326 aa		10.87	□□□□□ -0.67
COMMD4-223	ENST00000568301	MTFP1	Q9UDX5	166 aa		10.87	□□□□□ -0.67
COMMD4-223	ENST00000568301	IGHV4-4	A0A075B6R2	117 aa		10.86	□□□□□ -0.67
COMMD4-223	ENST00000568301	YPEL3	P61236	119 aa	Predicted RBP	10.86	□□□□□ -0.67
COMMD4-223	ENST00000568301	VBP1	P61758	197 aa		10.86	□□□□□ -0.67
COMMD4-223	ENST00000568301	DHRS2	Q13268	280 aa		10.86	□□□□□ -0.67
COMMD4-223	ENST00000568301	GPR107	Q5VW38	600 aa		10.86	□□□□□ -0.67
COMMD4-223	ENST00000568301	MZT2A	Q6P582	158 aa		10.86	□□□□□ -0.67
COMMD4-223	ENST00000568301	C16orf54	Q6UWD8	224 aa		10.86	□□□□□ -0.67
COMMD4-223	ENST00000568301		Q6ZRM9	215 aa		10.86	□□□□□ -0.67
COMMD4-223	ENST00000568301	OR52I2	Q8NH67	350 aa		10.86	□□□□□ -0.67
COMMD4-223	ENST00000568301	RAB2B	Q8WUD1	216 aa		10.86	□□□□□ -0.67
COMMD4-223	ENST00000568301	SEPSECS	Q9HD40	501 aa	Known RBP	10.86	□□□□□ -0.67
COMMD4-223	ENST00000568301	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	10.86	□□□□□ -0.67
COMMD4-223	ENST00000568301		A0A0G2JRQ6	117 aa		10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	FAM25A	B3EWG3	89 aa		10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	FAM25C	B3EWG5	89 aa		10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	FAM25G	B3EWG6	89 aa		10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	CDS2	O95674	445 aa		10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	HNRNPC	P07910	306 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	IGLC1	P0CG04	106 aa		10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	MED14OS	P0DP75	135 aa		10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	SLC25A4	P12235	298 aa		10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	NUTF2	P61970	127 aa	Known RBP	10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	PRSS54	Q6PEW0	395 aa		10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	OR1S2	Q8NGQ3	325 aa		10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	OR13C8	Q8NGS7	320 aa		10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	RNASE11	Q8TAA1	199 aa	Known RBP	10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	C15orf40	Q8WUR7	153 aa		10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	GLMP	Q8WWB7	406 aa		10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	C1QTNF4	Q9BXJ3	329 aa		10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	TMEM222	Q9H0R3	208 aa		10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	CLEC5A	Q9NY25	188 aa		10.85	□□□□□ -0.67
COMMD4-223	ENST00000568301	ZNF701	M0R085	212 aa	Predicted RBP	10.84	□□□□□ -0.67
COMMD4-223	ENST00000568301	CD74	P04233	296 aa		10.84	□□□□□ -0.67
COMMD4-223	ENST00000568301	C2orf83	Q53S99	150 aa		10.84	□□□□□ -0.67
COMMD4-223	ENST00000568301	PSMG4	Q5JS54	123 aa		10.84	□□□□□ -0.67
COMMD4-223	ENST00000568301	TMEM229B	Q8NBD8	167 aa		10.84	□□□□□ -0.67
COMMD4-223	ENST00000568301	AP3S1	Q92572	193 aa		10.84	□□□□□ -0.67
COMMD4-223	ENST00000568301	ABHD1	Q96SE0	405 aa		10.84	□□□□□ -0.67
COMMD4-223	ENST00000568301	HEYL	Q9NQ87	328 aa	Predicted RBP	10.84	□□□□□ -0.67
COMMD4-223	ENST00000568301	NDUFA13	Q9P0J0	144 aa		10.84	□□□□□ -0.67
COMMD4-223	ENST00000568301	AMBP	P02760	352 aa		10.83	□□□□□ -0.68
COMMD4-223	ENST00000568301	OR10J1	P30954	320 aa		10.83	□□□□□ -0.68
COMMD4-223	ENST00000568301	RND2	P52198	227 aa		10.83	□□□□□ -0.68
COMMD4-223	ENST00000568301	TAS2R19	P59542	299 aa		10.83	□□□□□ -0.68
COMMD4-223	ENST00000568301	SNRPD3	P62318	126 aa	Known RBP	10.83	□□□□□ -0.68
COMMD4-223	ENST00000568301	DHODH	Q02127	395 aa		10.83	□□□□□ -0.68
COMMD4-223	ENST00000568301	C12orf74	Q32Q52	190 aa		10.83	□□□□□ -0.68
COMMD4-223	ENST00000568301	RNASE12	Q5GAN4	147 aa	Known RBP	10.83	□□□□□ -0.68
COMMD4-223	ENST00000568301	CLVS1	Q8IUQ0	354 aa	Predicted RBP	10.83	□□□□□ -0.68
COMMD4-223	ENST00000568301	OR4D10	Q8NGI6	311 aa		10.83	□□□□□ -0.68
COMMD4-223	ENST00000568301	MARCH1	Q8TCQ1	289 aa		10.83	□□□□□ -0.68
COMMD4-223	ENST00000568301	GLYATL2	Q8WU03	294 aa		10.83	□□□□□ -0.68
COMMD4-223	ENST00000568301	DEFB131B	A0A096LNP1	70 aa		10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	FAM90A26	D6RGX4	464 aa		10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	BUB3	O43684	328 aa		10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	RAB3D	O95716	219 aa		10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301		P0DMU3	169 aa		10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	FAM231A	P0DMU4	169 aa		10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	FAM231C	P0DMU5	169 aa		10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	NPY1R	P25929	384 aa		10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	SCGB2B2	Q4G0G5	96 aa		10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	ETFRF1	Q6IPR1	90 aa		10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	POM121L12	Q8N7R1	296 aa		10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	SLC24A4	Q8NFF2	622 aa		10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	RBPMS	Q93062	196 aa	Known RBP	10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	NAA50	Q9GZZ1	169 aa	Known RBP	10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	NRN1	Q9NPD7	142 aa		10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	EXTL2	Q9UBQ6	330 aa		10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	CACFD1	Q9UGQ2	172 aa		10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	CELA1	Q9UNI1	258 aa		10.82	□□□□□ -0.68
COMMD4-223	ENST00000568301	HSPG2	P98160	4391 aa		10.81	□□□□□ -0.68
COMMD4-223	ENST00000568301		H3BMM0	161 aa		10.81	□□□□□ -0.68
COMMD4-223	ENST00000568301	IL4	P05112	153 aa		10.81	□□□□□ -0.68
COMMD4-223	ENST00000568301	OR5AC1	P0C628	307 aa		10.81	□□□□□ -0.68
COMMD4-223	ENST00000568301	RD3L	P0DJH9	198 aa		10.81	□□□□□ -0.68
COMMD4-223	ENST00000568301	ZNF182	P17025	639 aa	Predicted RBP	10.81	□□□□□ -0.68
COMMD4-223	ENST00000568301	SSBP1	Q04837	148 aa	Known RBP	10.81	□□□□□ -0.68
COMMD4-223	ENST00000568301	USF2	Q15853	346 aa	Predicted RBP	10.81	□□□□□ -0.68
COMMD4-223	ENST00000568301	STEAP1B	Q6NZ63	245 aa		10.81	□□□□□ -0.68
COMMD4-223	ENST00000568301	NOXA1	Q86UR1	476 aa		10.81	□□□□□ -0.68
COMMD4-223	ENST00000568301	SELENOH	Q8IZQ5	122 aa	Known RBP	10.81	□□□□□ -0.68
COMMD4-223	ENST00000568301	LHFPL5	Q8TAF8	219 aa		10.81	□□□□□ -0.68
COMMD4-223	ENST00000568301	RTBDN	Q9BSG5	229 aa	Predicted RBP	10.81	□□□□□ -0.68
COMMD4-223	ENST00000568301	NDUFAF3	Q9BU61	184 aa		10.81	□□□□□ -0.68
COMMD4-223	ENST00000568301	XCL2	Q9UBD3	114 aa		10.81	□□□□□ -0.68
COMMD4-223	ENST00000568301	CACNG5	Q9UF02	275 aa		10.81	□□□□□ -0.68
COMMD4-223	ENST00000568301	C14orf166	Q9Y224	244 aa	Known RBP	10.81	□□□□□ -0.68
COMMD4-223	ENST00000568301	PRSS29P	A6NIE9	313 aa		10.8	□□□□□ -0.68
COMMD4-223	ENST00000568301	GSTZ1	O43708	216 aa	Predicted RBP	10.8	□□□□□ -0.68
COMMD4-223	ENST00000568301	NOL3	O60936	208 aa	Known RBP	10.8	□□□□□ -0.68
COMMD4-223	ENST00000568301	TOMM40	O96008	361 aa		10.8	□□□□□ -0.68

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