RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 RPP30P78346 268 aaKnown RBP8.31□□□□□ -1.08
CDH3-206ENST00000567674 IZUMO4Q1ZYL8 232 aa8.31□□□□□ -1.08
CDH3-206ENST00000567674 ODF3L2Q3SX64 289 aa8.31□□□□□ -1.08
CDH3-206ENST00000567674 PYDC2Q56P42 97 aa8.31□□□□□ -1.08
CDH3-206ENST00000567674 FAAP20Q6NZ36 180 aa8.31□□□□□ -1.08
CDH3-206ENST00000567674 TRIM63Q969Q1 353 aa8.31□□□□□ -1.08
CDH3-206ENST00000567674 TMEM230Q96A57 120 aa8.31□□□□□ -1.08
CDH3-206ENST00000567674 CIB3Q96Q77 187 aaPredicted RBP8.31□□□□□ -1.08
CDH3-206ENST00000567674 RBM38Q9H0Z9 239 aaKnown RBP8.31□□□□□ -1.08
CDH3-206ENST00000567674 MCUBQ9NWR8 336 aa8.31□□□□□ -1.08
CDH3-206ENST00000567674 LYSTQ99698 3801 aa8.31□□□□□ -1.08
CDH3-206ENST00000567674 RYR1P21817 5038 aa8.3□□□□□ -1.08
CDH3-206ENST00000567674 IGHV3-21A0A0B4J1V1 117 aa8.3□□□□□ -1.08
CDH3-206ENST00000567674 HELTA6NFD8 242 aa8.3□□□□□ -1.08
CDH3-206ENST00000567674 CEBPZOSA8MTT3 80 aa8.3□□□□□ -1.08
CDH3-206ENST00000567674 CFDP00746 253 aaPredicted RBP8.3□□□□□ -1.08
CDH3-206ENST00000567674 IGKV1-17P01599 117 aa8.3□□□□□ -1.08
CDH3-206ENST00000567674 FABP1P07148 127 aa8.3□□□□□ -1.08
CDH3-206ENST00000567674 NPY1RP25929 384 aa8.3□□□□□ -1.08
CDH3-206ENST00000567674 SUPT4H1P63272 117 aaKnown RBP8.3□□□□□ -1.08
CDH3-206ENST00000567674 LINC00299Q6ZSB3 139 aa8.3□□□□□ -1.08
CDH3-206ENST00000567674 DTD1Q8TEA8 209 aa8.3□□□□□ -1.08
CDH3-206ENST00000567674 RNF183Q96D59 192 aa8.3□□□□□ -1.08
CDH3-206ENST00000567674 C7orf50Q9BRJ6 194 aaKnown RBP8.3□□□□□ -1.08
CDH3-206ENST00000567674 OVOL2Q9BRP0 275 aa8.3□□□□□ -1.08
CDH3-206ENST00000567674 FNDC4Q9H6D8 234 aaPredicted RBP8.3□□□□□ -1.08
CDH3-206ENST00000567674 MAP6D1Q9H9H5 199 aa8.3□□□□□ -1.08
CDH3-206ENST00000567674 U3KQE9 123 aa8.3□□□□□ -1.08
CDH3-206ENST00000567674 V9GYH0 126 aa8.3□□□□□ -1.08
CDH3-206ENST00000567674 SPRY2O43597 315 aa8.29□□□□□ -1.08
CDH3-206ENST00000567674 PITX3O75364 302 aa8.29□□□□□ -1.08
CDH3-206ENST00000567674 IGLC1P0CG04 106 aa8.29□□□□□ -1.08
CDH3-206ENST00000567674 S100A7P31151 101 aa8.29□□□□□ -1.08
CDH3-206ENST00000567674 RBMS2Q15434 407 aaKnown RBP8.29□□□□□ -1.08
CDH3-206ENST00000567674 PRSS54Q6PEW0 395 aa8.29□□□□□ -1.08
CDH3-206ENST00000567674 TCF24Q7RTU0 167 aa8.29□□□□□ -1.08
CDH3-206ENST00000567674 CSTL1Q9H114 145 aa8.29□□□□□ -1.08
CDH3-206ENST00000567674 STARD9Q9P2P6 4700 aa8.28□□□□□ -1.08
CDH3-206ENST00000567674 CCDC160A6NGH7 325 aa8.28□□□□□ -1.08
CDH3-206ENST00000567674 CENPXA8MT69 81 aa8.28□□□□□ -1.08
CDH3-206ENST00000567674 MPTX1A8MV57 137 aa8.28□□□□□ -1.08
CDH3-206ENST00000567674 DNASE2O00115 360 aaPredicted RBP8.28□□□□□ -1.08
CDH3-206ENST00000567674 IFNA10P01566 189 aa8.28□□□□□ -1.08
CDH3-206ENST00000567674 OR10J1P30954 320 aa8.28□□□□□ -1.08
CDH3-206ENST00000567674 RAB11AP62491 216 aa8.28□□□□□ -1.08
CDH3-206ENST00000567674 ZNF79Q15937 498 aa8.28□□□□□ -1.08
CDH3-206ENST00000567674 SAMD13Q5VXD3 122 aa8.28□□□□□ -1.08
CDH3-206ENST00000567674 OR8G2PQ6IF36 304 aa8.28□□□□□ -1.08
CDH3-206ENST00000567674 WFDC10AQ9H1F0 79 aa8.28□□□□□ -1.08
CDH3-206ENST00000567674 MS4A6AQ9H2W1 248 aa8.28□□□□□ -1.08
CDH3-206ENST00000567674 SFT2D2O95562 160 aa8.27□□□□□ -1.09
CDH3-206ENST00000567674 TOMM40O96008 361 aa8.27□□□□□ -1.09
CDH3-206ENST00000567674 HNRNPCP07910 306 aaKnown RBP eCLIP8.27□□□□□ -1.09
CDH3-206ENST00000567674 RD3LP0DJH9 198 aa8.27□□□□□ -1.09
CDH3-206ENST00000567674 SPINK9Q5DT21 86 aa8.27□□□□□ -1.09
CDH3-206ENST00000567674 C1orf194Q5T5A4 169 aa8.27□□□□□ -1.09
CDH3-206ENST00000567674 MORN3Q6PF18 240 aaPredicted RBP8.27□□□□□ -1.09
CDH3-206ENST00000567674 LYZL2Q7Z4W2 148 aa8.27□□□□□ -1.09
CDH3-206ENST00000567674 CENPSQ8N2Z9 138 aa8.27□□□□□ -1.09
CDH3-206ENST00000567674 ST8SIA2Q92186 375 aa8.27□□□□□ -1.09
CDH3-206ENST00000567674 SLC45A2Q9UMX9 530 aa8.27□□□□□ -1.09
CDH3-206ENST00000567674 ZNF207O43670 478 aaKnown RBP8.26□□□□□ -1.09
CDH3-206ENST00000567674 JTBO76095 146 aa8.26□□□□□ -1.09
CDH3-206ENST00000567674 SPP1P10451 314 aa8.26□□□□□ -1.09
CDH3-206ENST00000567674 INPP1P49441 399 aa8.26□□□□□ -1.09
CDH3-206ENST00000567674 RND2P52198 227 aa8.26□□□□□ -1.09
CDH3-206ENST00000567674 C16orf54Q6UWD8 224 aa8.26□□□□□ -1.09
CDH3-206ENST00000567674 OR51G1Q8NGK1 321 aa8.26□□□□□ -1.09
CDH3-206ENST00000567674 OR1S1Q8NH92 325 aa8.26□□□□□ -1.09
CDH3-206ENST00000567674 SRRQ9GZT4 340 aa8.26□□□□□ -1.09
CDH3-206ENST00000567674 FBXL17Q9UF56 701 aa8.26□□□□□ -1.09
CDH3-206ENST00000567674 NUPR2A6NF83 97 aa8.25□□□□□ -1.09
CDH3-206ENST00000567674 K7EQG2 157 aa8.25□□□□□ -1.09
CDH3-206ENST00000567674 BUB3O43684 328 aa8.25□□□□□ -1.09
CDH3-206ENST00000567674 IGHV3-48P01763 117 aa8.25□□□□□ -1.09
CDH3-206ENST00000567674 IFNA4P05014 189 aa8.25□□□□□ -1.09
CDH3-206ENST00000567674 P2RY1P47900 373 aa8.25□□□□□ -1.09
CDH3-206ENST00000567674 MLANAQ16655 118 aa8.25□□□□□ -1.09
CDH3-206ENST00000567674 DCANP1Q8TF63 244 aa8.25□□□□□ -1.09
CDH3-206ENST00000567674 TMEM170AQ8WVE7 144 aa8.25□□□□□ -1.09
CDH3-206ENST00000567674 NPIPB3Q92617 1050 aa8.25□□□□□ -1.09
CDH3-206ENST00000567674 RBKSQ9H477 322 aa8.25□□□□□ -1.09
CDH3-206ENST00000567674 RABAC1Q9UI14 185 aa8.25□□□□□ -1.09
CDH3-206ENST00000567674 RNF24Q9Y225 148 aa8.25□□□□□ -1.09
CDH3-206ENST00000567674 IGHV3OR16-8A0A075B7F1 116 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 SNRPGP15A8MWD9 76 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 SYNGR2O43760 224 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 NDUFB6O95139 128 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 TCTAP57738 103 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 NUTF2P61970 127 aaKnown RBP8.24□□□□□ -1.09
CDH3-206ENST00000567674 SNRPD3P62318 126 aaKnown RBP8.24□□□□□ -1.09
CDH3-206ENST00000567674 RPL11P62913 178 aaKnown RBP8.24□□□□□ -1.09
CDH3-206ENST00000567674 ID3Q02535 119 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 TIGITQ495A1 244 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 SPATA31B1PQ5VZV4 182 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 GGNBP1Q5YKI7 109 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 TRIQKQ629K1 86 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 TMED4Q7Z7H5 227 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 S100A7AQ86SG5 101 aa8.24□□□□□ -1.09
CDH3-206ENST00000567674 STHQ8IWL8 128 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms